Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006808
CDS Infomation

pacid=37462819 polypeptide=PGSC0003DMP400004729 locus=PGSC0003DMG400002639 ID=PGSC0003DMT400006808.v4.03 annot-version=v4.03
Sequence

ATGGGGGCTTCACTTCCTCCAAAAGAGGCCAACCTCTTCAAACTCATAGTTAAATCTTAC
GAGACTAAGCAGTATAAGAAAGGACTAAAAGCTACTGATACGATTCTCAAGAAGTTTCCT
AATCATGGAGAAACATTGTCAATGAAAGGATTAACATTGAATTGTATGGACCGGAAGTCA
GAAGCATATGAACTTGTCCGGCTTGGATTGAAGAATGACCTTAAGAGCCATGTTTGTTGG
CATGTTTATGGTCTCCTATACCGGTCTGATAGAGAGTACCGAGAAGCAATTAAATGCTAT
CGAAATGCCCTCAGGATTGATCCTGACAATATTGAGATATTACGAGACCTATCCCTTCTA
CAGGCACAAATGCGCGACTTGGAAGGTTTTGTTGAAACAAGACAGCAATTGCTCACTCTA
AAACCAAATCATCGTATGAACTGGATTGGCTTTGCCGTTGCTCATCATTTAAACTCAAAT
GGATCAAAAGCTGTTGATATCCTTGAGGCATATGAAGGGACTCTTGATGATGATTACCCT
CCAGAGAATGAACGTTGTGAACATGGGGAGATGCTCCTGTACAAGATCTCTTTATTAGAG
GAATGTGGATTTCCTGAGAGGGCTCTTGAAGAATTACGCAAGAAGGAGTCGAAGATGGTT
GACAAATTGGACTATAAGGAGCAAGAAGCTTTACTTATTTTGAAGCTTGGCCGCTTTGAG
GAAGGTGAAAAGTTGTTCAGAGTGCTTCTCACCATGAATCCTGACAATTACAGATACTAT
GATGGTTTACAAAGATGTTTGGGATTGTATTCTGAAAAGGGGCAATATACCGCTGATGAA
ATTGATAGACTAGAAAATTTGTACAGAGTACTTGCCCATCAGTATAGTAGATCATCTGCT
GTAAAGAGAATTCCACTTGATTTTCTCCAAGATGACAAGTTTCGAGAAGCTGCAGATAAT
TATATTCGACCTCTTCTGACAAAAGGGGTTCCTTCTTTGTTTTCTGATCTTTATCCGCTG
TATGATCATCCTGGCAAGGCCGATATTCTAGGGGAATTTGTTTTGAAGCTTGAACAATCA
CTTAAGAGTACTGGTGGATACCCTGGGAGAGTGGAGAAGGAACCCCCTTCAACACTTATG
TGGACTTTATTTTATTTGGCTCAGCACTATGATAGACGTGAACAGTATGACATTGCTCTT
ACTAAAATTGACGAGGCAATTGAGCACACTCCAACTGTAATAGATTTATACTCTGTCAAG
AGCCGCATACTAAAGCATGCTGGTGACTTGGCAGCAGCTGCTGCACTTGCTGATGAAGCT
AGGTGTATGGATCTTGCAGATCGATATGTTAATAGCGAATGTGTTAAGCGCATGCTTCAG
GCAGATCAGGTCACATTGGCTGAAAAGACTGCTGTACTATTCACCAAAGACGGGGAGCAA
CACAATAACCTTTATGATATGCAGTGCATGTGGTATGAACTAGCATCAGGGGAAAGTTAT
CTTCGCCAAGGTGAGTTGGGAAGGTCCTTAAAGAAGTTTCTGGCAGTGGAGAAGCATTAC
GCGGATATCACGGAGGACCAGTTTGATTTTCACTCCTACTGCCTAAGAAAAATGACTCTG
CGGGCCTACGTGGAAATGTTGAAGTTTCAAGATCGGCTTCATTCACATGCGTATTTTCGC
AAAGCAGCTAGTGGTGCTATCAGATGCTATCTGAAGCTGTACGATTCTCCTTTGAAGTCA
GCATCTGAAGAGGATGATGCAATGTCCAAGTTGCCTCCTTCTCAGAAAAAGAAATTAAAG
CAAAAACTGAGGAAGGCAGAAGCACGAGCTAAGAAAGATGCAGAAGTCAAAATTGAGGAA
TCCAATGCAACTAGTGCTACTAAATCTGGAAAGCGCCATGTGAAGCCTGTAGATCCTGAT
CCACATGGTGAAAAATTGATTCAGACTGAAGATCCTCTGGCAGAAGCTTCAAAGTACCTC
AAGCTTCTCCTTAAGCACTCACCAGATTTCTTGGAGACACATTTGCTGTCCTTTGACGTA
AACATGAGGAAGCAGAAGATCTTGCTTGCCTTGCAGGCAATAAAGCATTTAATGCGGTTG
GATGCAGATGATCCAAAATCACATCTGTGCTTGATGAAGTTCTTCCATAAAGTTGACTCC
TTGCCTACTCCAGTAACTGATACTGAAAAGCTCATCTGGGGTGTCTTGGAAGCAGAGCGA
CCTGCCTTTAGCCAGTTGCATGGTAAATCTCTCATTGAGGCAAACAACACTTTTCTTGAG
AAACATAAAGAATCATTGATGCATAGGGCTGCTGTGGCTGAGTTGCTACATGTTCTGGAA
CCAAACAAGAAGGCTGAGGCTGTCAAATTAATTGAGGACTCTGTTAATGATCTTGTTTCT
ATGGACGGAGGACAAGGAACTGTCAGGTCATGGAAATTGAACGACTGCATTATAGTTCAC
AAACTCCTCGAGACAACTCTGGTTGACCATGATGCTGCATCCAGATGGAAAGTTCGTTGT
GCTGAGTACTTTGTGTACTCGACTTACTTTGGAGGTATTCAAAGCTCAGCTAACAATCAG
ATACAGAAATCTCCTGCAAATGGAGCTGTAGGCCTAAATGCTGGTGAAAATTCTTCTCTT
TCATCAAATGGGAGATTAGAGAAACTAAATGCGCTTAAGGATCTACAAATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004729
PEP Infomation

pacid=37462819 transcript=PGSC0003DMT400006808 locus=PGSC0003DMG400002639 ID=PGSC0003DMT400006808.v4.03 annot-version=v4.03
Sequence

MGASLPPKEANLFKLIVKSYETKQYKKGLKATDTILKKFPNHGETLSMKGLTLNCMDRKS
EAYELVRLGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLL
QAQMRDLEGFVETRQQLLTLKPNHRMNWIGFAVAHHLNSNGSKAVDILEAYEGTLDDDYP
PENERCEHGEMLLYKISLLEECGFPERALEELRKKESKMVDKLDYKEQEALLILKLGRFE
EGEKLFRVLLTMNPDNYRYYDGLQRCLGLYSEKGQYTADEIDRLENLYRVLAHQYSRSSA
VKRIPLDFLQDDKFREAADNYIRPLLTKGVPSLFSDLYPLYDHPGKADILGEFVLKLEQS
LKSTGGYPGRVEKEPPSTLMWTLFYLAQHYDRREQYDIALTKIDEAIEHTPTVIDLYSVK
SRILKHAGDLAAAAALADEARCMDLADRYVNSECVKRMLQADQVTLAEKTAVLFTKDGEQ
HNNLYDMQCMWYELASGESYLRQGELGRSLKKFLAVEKHYADITEDQFDFHSYCLRKMTL
RAYVEMLKFQDRLHSHAYFRKAASGAIRCYLKLYDSPLKSASEEDDAMSKLPPSQKKKLK
QKLRKAEARAKKDAEVKIEESNATSATKSGKRHVKPVDPDPHGEKLIQTEDPLAEASKYL
KLLLKHSPDFLETHLLSFDVNMRKQKILLALQAIKHLMRLDADDPKSHLCLMKFFHKVDS
LPTPVTDTEKLIWGVLEAERPAFSQLHGKSLIEANNTFLEKHKESLMHRAAVAELLHVLE
PNKKAEAVKLIEDSVNDLVSMDGGQGTVRSWKLNDCIIVHKLLETTLVDHDAASRWKVRC
AEYFVYSTYFGGIQSSANNQIQKSPANGAVGLNAGENSSLSSNGRLEKLNALKDLQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400006808
Transcript Infomation

pacid=37462819 locus=PGSC0003DMG400002639 ID=PGSC0003DMT400006808.v4.03 annot-version=v4.03
Sequence

ATGGGGGCTTCACTTCCTCCAAAAGAGGCCAACCTCTTCAAACTCATAGTTAAATCTTAC
GAGACTAAGCAGTATAAGAAAGGACTAAAAGCTACTGATACGATTCTCAAGAAGTTTCCT
AATCATGGAGAAACATTGTCAATGAAAGGATTAACATTGAATTGTATGGACCGGAAGTCA
GAAGCATATGAACTTGTCCGGCTTGGATTGAAGAATGACCTTAAGAGCCATGTTTGTTGG
CATGTTTATGGTCTCCTATACCGGTCTGATAGAGAGTACCGAGAAGCAATTAAATGCTAT
CGAAATGCCCTCAGGATTGATCCTGACAATATTGAGATATTACGAGACCTATCCCTTCTA
CAGGCACAAATGCGCGACTTGGAAGGTTTTGTTGAAACAAGACAGCAATTGCTCACTCTA
AAACCAAATCATCGTATGAACTGGATTGGCTTTGCCGTTGCTCATCATTTAAACTCAAAT
GGATCAAAAGCTGTTGATATCCTTGAGGCATATGAAGGGACTCTTGATGATGATTACCCT
CCAGAGAATGAACGTTGTGAACATGGGGAGATGCTCCTGTACAAGATCTCTTTATTAGAG
GAATGTGGATTTCCTGAGAGGGCTCTTGAAGAATTACGCAAGAAGGAGTCGAAGATGGTT
GACAAATTGGACTATAAGGAGCAAGAAGCTTTACTTATTTTGAAGCTTGGCCGCTTTGAG
GAAGGTGAAAAGTTGTTCAGAGTGCTTCTCACCATGAATCCTGACAATTACAGATACTAT
GATGGTTTACAAAGATGTTTGGGATTGTATTCTGAAAAGGGGCAATATACCGCTGATGAA
ATTGATAGACTAGAAAATTTGTACAGAGTACTTGCCCATCAGTATAGTAGATCATCTGCT
GTAAAGAGAATTCCACTTGATTTTCTCCAAGATGACAAGTTTCGAGAAGCTGCAGATAAT
TATATTCGACCTCTTCTGACAAAAGGGGTTCCTTCTTTGTTTTCTGATCTTTATCCGCTG
TATGATCATCCTGGCAAGGCCGATATTCTAGGGGAATTTGTTTTGAAGCTTGAACAATCA
CTTAAGAGTACTGGTGGATACCCTGGGAGAGTGGAGAAGGAACCCCCTTCAACACTTATG
TGGACTTTATTTTATTTGGCTCAGCACTATGATAGACGTGAACAGTATGACATTGCTCTT
ACTAAAATTGACGAGGCAATTGAGCACACTCCAACTGTAATAGATTTATACTCTGTCAAG
AGCCGCATACTAAAGCATGCTGGTGACTTGGCAGCAGCTGCTGCACTTGCTGATGAAGCT
AGGTGTATGGATCTTGCAGATCGATATGTTAATAGCGAATGTGTTAAGCGCATGCTTCAG
GCAGATCAGGTCACATTGGCTGAAAAGACTGCTGTACTATTCACCAAAGACGGGGAGCAA
CACAATAACCTTTATGATATGCAGTGCATGTGGTATGAACTAGCATCAGGGGAAAGTTAT
CTTCGCCAAGGTGAGTTGGGAAGGTCCTTAAAGAAGTTTCTGGCAGTGGAGAAGCATTAC
GCGGATATCACGGAGGACCAGTTTGATTTTCACTCCTACTGCCTAAGAAAAATGACTCTG
CGGGCCTACGTGGAAATGTTGAAGTTTCAAGATCGGCTTCATTCACATGCGTATTTTCGC
AAAGCAGCTAGTGGTGCTATCAGATGCTATCTGAAGCTGTACGATTCTCCTTTGAAGTCA
GCATCTGAAGAGGATGATGCAATGTCCAAGTTGCCTCCTTCTCAGAAAAAGAAATTAAAG
CAAAAACTGAGGAAGGCAGAAGCACGAGCTAAGAAAGATGCAGAAGTCAAAATTGAGGAA
TCCAATGCAACTAGTGCTACTAAATCTGGAAAGCGCCATGTGAAGCCTGTAGATCCTGAT
CCACATGGTGAAAAATTGATTCAGACTGAAGATCCTCTGGCAGAAGCTTCAAAGTACCTC
AAGCTTCTCCTTAAGCACTCACCAGATTTCTTGGAGACACATTTGCTGTCCTTTGACGTA
AACATGAGGAAGCAGAAGATCTTGCTTGCCTTGCAGGCAATAAAGCATTTAATGCGGTTG
GATGCAGATGATCCAAAATCACATCTGTGCTTGATGAAGTTCTTCCATAAAGTTGACTCC
TTGCCTACTCCAGTAACTGATACTGAAAAGCTCATCTGGGGTGTCTTGGAAGCAGAGCGA
CCTGCCTTTAGCCAGTTGCATGGTAAATCTCTCATTGAGGCAAACAACACTTTTCTTGAG
AAACATAAAGAATCATTGATGCATAGGGCTGCTGTGGCTGAGTTGCTACATGTTCTGGAA
CCAAACAAGAAGGCTGAGGCTGTCAAATTAATTGAGGACTCTGTTAATGATCTTGTTTCT
ATGGACGGAGGACAAGGAACTGTCAGGTCATGGAAATTGAACGACTGCATTATAGTTCAC
AAACTCCTCGAGACAACTCTGGTTGACCATGATGCTGCATCCAGATGGAAAGTTCGTTGT
GCTGAGTACTTTGTGTACTCGACTTACTTTGGAGGTATTCAAAGCTCAGCTAACAATCAG
ATACAGAAATCTCCTGCAAATGGAGCTGTAGGCCTAAATGCTGGTGAAAATTCTTCTCTT
TCATCAAATGGGAGATTAGAGAAACTAAATGCGCTTAAGGATCTACAAATTTAA