Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006770
CDS Infomation

pacid=37461007 polypeptide=PGSC0003DMP400004701 locus=PGSC0003DMG400002627 ID=PGSC0003DMT400006770.v4.03 annot-version=v4.03
Sequence

ATGGTAGTTGTTGACATGTCGAATAATCATCCTCCTTCTCATGAAACGAAAGATTTTTTC
CCCTCTCCCGCACTCTCTCTGAGTCTCGCCGGAATTTTCCGAGATGGCGGCGGAGCGGGA
AGTAGTGCCGGAAATATGGAAACGACGGAGGAAGTTGACGAAGGAAGTGCGGCGGCGAGC
AGAGGAGGTCGGCCGAGAGAAGAAACGTCGACGGTTGAGATTAGCAGTGAGAATTCGGAA
CAAATGAGATCACGCGGTTCGGATGATGATTTAGAGCATGATGATACTTGCAACGAAGAC
GAAGAAGATCCAAACAACAACAGTAAGAAGAAGAAAAGGAAAAAATATCACAGACACACT
GTTCAACAAATCAGAGAAATGGAAGCTTTATTCAAAGAGTCACCACATCCAGATGAGAAG
CAAAGGCAGCAGCTCAGCAAGCAATTAGGTCTTCATCCAAGGCAAGTCAAATTCTGGTTT
CAAAATCGGCGAACCCAAATAAAGGCAATACAGGAACGCCATGAAAATTCATTGTTAAAG
GCTGAAATTGAAAAGCTTCGTGAAGAAAATAAGGGATTAAGGGGAACTTCAAAGAATCCT
TCTTGTCCTAATTGTGGATTTGCTAGCTCTAGCAATAATGCTCCTACTCTTCCTGCTGAA
GAACAACAATTGCGAATCGAAAACGCCAGACTTAGAGCTGAGGTTGAAAAGCTTAGGGCA
GCATTGGGTAAATACCCATTAGGGACATCACCAAATAGTTCATCTTCATGTTCAGGAGGA
AATGATGAAGAAAATAAAAGCGCTTTAGATTTTTACACCGGCATTTTTGGGCTTGAAAAA
CCAAGAATTATGCACATTGTTAATCAAGCAATGGAACAACTTACAAAGATGGCTACTAGT
GGTGAACCACTGTGGATTAAAAGCTTTGAAACTGGAAGAGAAATACTTAATTATGACGAA
TACACGAAGGAGTTTCCTCCTGGGGACGTAAAATCTAAAAGAATGTGTATTGAAGCTTCC
AGAGACACAGGAATTGTATTCATGGAGCTCCCTCGACTTGTTCAGACTTTCATGGACGTA
AATCAATGGAGAGAAATGTTCCCATCGATAATTTCAAAGGCAGCAACAGTAGACGTGATC
TGCAATGGTACTGAAGGTGCTAACAGCTGGGATGGCGCAGTTCAGCTAATGTTTGCAGAG
GTGCAGATGTTAACGCCAGTAGTGGGGACGAGAGAAGTGTATTTTGTGAGATATTGCAAA
CAAATGAGTGCAGCACAGTGGGGGATTGTGGACGTTTCTGTCGATAAAGTTGAAGGCAGC
ATTGATGCTTCTCTCCTCAAATGCAGAAAATTACCCTCAGGATGCATTCTACAAGAACAA
TCCAATGCACATTGCAAGGTGACGTGGGTGGAACACTTGGAGTGCCAAAAAAGCATAGTA
GACTCTCTGTACCGTGTAACTGTCAACAGCGGCCAAGCTTTTGGCGCAAGGCGCTGGATG
GCTACTCTTCAGCAACAATGTGAGCGCCTCCTCTTCTTCATGGCAACCAACATTCCTACC
AAGGACACTACTGGTGTTGCCACACTTGCTGGTAGAAAAAGTATACTAACATTGGCACAA
AGAATGACTTGGGGTTTCTACCGCGTACTTGGAGCTTCTAGTTATAATACATGGAACAAG
GTCCCTAGCAAAACTGGCCAAGAGGATATTAGGATGACCTCTAGGAGGAACTTAACTGAT
CCTGGTGAACCCCAAGGCCTTATTCTCTGTGCTGTTTCTTCCATTTGGTTGCCCGTTTCT
CGCAACGTCCTATTTGATTTCTTGAAAGATGAAAACCATCGCCATGAGTGGGATGTCATG
TCAAATGGAGGCCCAGTGCAATCCGTTGCAAATTTAGCAAAAGGTCAAGACAAAGGAAAT
GCAGTCTCTATCCAAGCAGTGAAATTAAGAGAAAACAACATGTGGATCCTCCAAGATACT
TGCACCAATGCTTATGAATCCGCAGTGGTCTATGCCCCAGTGGACATTGCAGGCATGCAA
TCTGTTATAACAGGTTGTGACTCGAGCAATATTGCTGTGTTACCTTCAGGATTCTCAATC
CTTCCTGATGGCCTAGAGTCGAGGCCTTTTGTTATCACTTCTAGACCAGAGGACAGAAGT
TCAGAAGGAGGATCCTTGCTAACAGTTGCTTTTCAGATTCTAACTAGCAATTCTCCAACA
ACAAAACTTTCAAAGGAGTCTGTTGAATCCATCAACAACCTTTTGTCGTGTACGTTGCAC
AAGATCAAGACAAGATTCCAATGTGACAATGGATATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004701
PEP Infomation

pacid=37461007 transcript=PGSC0003DMT400006770 locus=PGSC0003DMG400002627 ID=PGSC0003DMT400006770.v4.03 annot-version=v4.03
Sequence

MVVVDMSNNHPPSHETKDFFPSPALSLSLAGIFRDGGGAGSSAGNMETTEEVDEGSAAAS
RGGRPREETSTVEISSENSEQMRSRGSDDDLEHDDTCNEDEEDPNNNSKKKKRKKYHRHT
VQQIREMEALFKESPHPDEKQRQQLSKQLGLHPRQVKFWFQNRRTQIKAIQERHENSLLK
AEIEKLREENKGLRGTSKNPSCPNCGFASSSNNAPTLPAEEQQLRIENARLRAEVEKLRA
ALGKYPLGTSPNSSSSCSGGNDEENKSALDFYTGIFGLEKPRIMHIVNQAMEQLTKMATS
GEPLWIKSFETGREILNYDEYTKEFPPGDVKSKRMCIEASRDTGIVFMELPRLVQTFMDV
NQWREMFPSIISKAATVDVICNGTEGANSWDGAVQLMFAEVQMLTPVVGTREVYFVRYCK
QMSAAQWGIVDVSVDKVEGSIDASLLKCRKLPSGCILQEQSNAHCKVTWVEHLECQKSIV
DSLYRVTVNSGQAFGARRWMATLQQQCERLLFFMATNIPTKDTTGVATLAGRKSILTLAQ
RMTWGFYRVLGASSYNTWNKVPSKTGQEDIRMTSRRNLTDPGEPQGLILCAVSSIWLPVS
RNVLFDFLKDENHRHEWDVMSNGGPVQSVANLAKGQDKGNAVSIQAVKLRENNMWILQDT
CTNAYESAVVYAPVDIAGMQSVITGCDSSNIAVLPSGFSILPDGLESRPFVITSRPEDRS
SEGGSLLTVAFQILTSNSPTTKLSKESVESINNLLSCTLHKIKTRFQCDNGY*

Transcript Sequence

Transcript ID

PGSC0003DMT400006770
Transcript Infomation

pacid=37461007 locus=PGSC0003DMG400002627 ID=PGSC0003DMT400006770.v4.03 annot-version=v4.03
Sequence

ATGGTAGTTGTTGACATGTCGAATAATCATCCTCCTTCTCATGAAACGAAAGATTTTTTC
CCCTCTCCCGCACTCTCTCTGAGTCTCGCCGGAATTTTCCGAGATGGCGGCGGAGCGGGA
AGTAGTGCCGGAAATATGGAAACGACGGAGGAAGTTGACGAAGGAAGTGCGGCGGCGAGC
AGAGGAGGTCGGCCGAGAGAAGAAACGTCGACGGTTGAGATTAGCAGTGAGAATTCGGAA
CAAATGAGATCACGCGGTTCGGATGATGATTTAGAGCATGATGATACTTGCAACGAAGAC
GAAGAAGATCCAAACAACAACAGTAAGAAGAAGAAAAGGAAAAAATATCACAGACACACT
GTTCAACAAATCAGAGAAATGGAAGCTTTATTCAAAGAGTCACCACATCCAGATGAGAAG
CAAAGGCAGCAGCTCAGCAAGCAATTAGGTCTTCATCCAAGGCAAGTCAAATTCTGGTTT
CAAAATCGGCGAACCCAAATAAAGGCAATACAGGAACGCCATGAAAATTCATTGTTAAAG
GCTGAAATTGAAAAGCTTCGTGAAGAAAATAAGGGATTAAGGGGAACTTCAAAGAATCCT
TCTTGTCCTAATTGTGGATTTGCTAGCTCTAGCAATAATGCTCCTACTCTTCCTGCTGAA
GAACAACAATTGCGAATCGAAAACGCCAGACTTAGAGCTGAGGTTGAAAAGCTTAGGGCA
GCATTGGGTAAATACCCATTAGGGACATCACCAAATAGTTCATCTTCATGTTCAGGAGGA
AATGATGAAGAAAATAAAAGCGCTTTAGATTTTTACACCGGCATTTTTGGGCTTGAAAAA
CCAAGAATTATGCACATTGTTAATCAAGCAATGGAACAACTTACAAAGATGGCTACTAGT
GGTGAACCACTGTGGATTAAAAGCTTTGAAACTGGAAGAGAAATACTTAATTATGACGAA
TACACGAAGGAGTTTCCTCCTGGGGACGTAAAATCTAAAAGAATGTGTATTGAAGCTTCC
AGAGACACAGGAATTGTATTCATGGAGCTCCCTCGACTTGTTCAGACTTTCATGGACGTA
AATCAATGGAGAGAAATGTTCCCATCGATAATTTCAAAGGCAGCAACAGTAGACGTGATC
TGCAATGGTACTGAAGGTGCTAACAGCTGGGATGGCGCAGTTCAGCTAATGTTTGCAGAG
GTGCAGATGTTAACGCCAGTAGTGGGGACGAGAGAAGTGTATTTTGTGAGATATTGCAAA
CAAATGAGTGCAGCACAGTGGGGGATTGTGGACGTTTCTGTCGATAAAGTTGAAGGCAGC
ATTGATGCTTCTCTCCTCAAATGCAGAAAATTACCCTCAGGATGCATTCTACAAGAACAA
TCCAATGCACATTGCAAGGTGACGTGGGTGGAACACTTGGAGTGCCAAAAAAGCATAGTA
GACTCTCTGTACCGTGTAACTGTCAACAGCGGCCAAGCTTTTGGCGCAAGGCGCTGGATG
GCTACTCTTCAGCAACAATGTGAGCGCCTCCTCTTCTTCATGGCAACCAACATTCCTACC
AAGGACACTACTGGTGTTGCCACACTTGCTGGTAGAAAAAGTATACTAACATTGGCACAA
AGAATGACTTGGGGTTTCTACCGCGTACTTGGAGCTTCTAGTTATAATACATGGAACAAG
GTCCCTAGCAAAACTGGCCAAGAGGATATTAGGATGACCTCTAGGAGGAACTTAACTGAT
CCTGGTGAACCCCAAGGCCTTATTCTCTGTGCTGTTTCTTCCATTTGGTTGCCCGTTTCT
CGCAACGTCCTATTTGATTTCTTGAAAGATGAAAACCATCGCCATGAGTGGGATGTCATG
TCAAATGGAGGCCCAGTGCAATCCGTTGCAAATTTAGCAAAAGGTCAAGACAAAGGAAAT
GCAGTCTCTATCCAAGCAGTGAAATTAAGAGAAAACAACATGTGGATCCTCCAAGATACT
TGCACCAATGCTTATGAATCCGCAGTGGTCTATGCCCCAGTGGACATTGCAGGCATGCAA
TCTGTTATAACAGGTTGTGACTCGAGCAATATTGCTGTGTTACCTTCAGGATTCTCAATC
CTTCCTGATGGCCTAGAGTCGAGGCCTTTTGTTATCACTTCTAGACCAGAGGACAGAAGT
TCAGAAGGAGGATCCTTGCTAACAGTTGCTTTTCAGATTCTAACTAGCAATTCTCCAACA
ACAAAACTTTCAAAGGAGTCTGTTGAATCCATCAACAACCTTTTGTCGTGTACGTTGCAC
AAGATCAAGACAAGATTCCAATGTGACAATGGATATTAG