Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006756
CDS Infomation

pacid=37463134 polypeptide=PGSC0003DMP400004690 locus=PGSC0003DMG400002622 ID=PGSC0003DMT400006756.v4.03 annot-version=v4.03
Sequence

ATGTTTACTCCAAAACCCTCTTCAAGATTTGTCCTTTTTACCTTAATACTTCTTCTCTTG
CTCAGCTTTTTGGCTCCATCAATTTCTTCTGAGCTTGACTTAGATGATGAAGATGGTGAT
GACATGGAAGGTTTGGAAGAACTCATAGCATTGGATGAAGAAGAAGATTTGCAGCAAAAA
CCGGAAGGGGCGCATCATGAGAAGCAATCTGAAGCTGAGTTTGTAAGTAAGGCACAAAGA
ATAGTACTTGAGCTTAATAATGACAATACTAAGAGGGCAATTGATGGAAATGAGTATGTT
TTGGTTCTGGGTTACACTCCCTGGTGCGCCAGGAGTGCGGAGTTAATGCCGAAATTTGCT
GAGGCTGCTACTGCTCTCAAAGAATTGGGGAGTCCGCTTTTGATGGCGAAGATTGATGCT
GAACGATACCCTAAAGTTGCTTCTACTCTCGAGATCAAAGGGTTCCCGACTTTGCTTCTG
TTTGTCAATGGCACTTCTCAACCTTACACTGGTGGATTCTCCGCGGAAGAACTTGTTATC
TGGGCAAGGAAGAAGACAGGTGTACCTATTATTAGAATTAGCTCAGATGCTGAAGCAAGA
CACTTTCTCAAGAAGCATACCATGTTTGTGGTTGGTGTGTTTGAGAAATTTGAGGGACCT
GATTATGATGAATTTACAAAAGCAGCTGAAATGGACAATGAAATTCAGTTTGTGGAAACT
AACAATGCAGAATTTGCCAAGCACCTCTTCCCTGATTTTAAGCCAACCAGACTTTTCCTT
GGTCTAGTTAAAAGTGAGCCAGAGAAATACACTGATTATGAAGGAATCTTCAGTACAGAT
GGAATCTTACAGTTTTTGGATGATAACAAGTTCCCCTTAACTACAGTACTTACTGAACTT
AACGCTGCTAGAGTTTACTCCAACACAAACAAACTTCAGGTGTTGATAATTGCTGAGCCT
GATGACTTCAAGAAACTTGTGGAACCTTTGCAAGACGTTGCAAGAAAGTTCAAATCAAAG
ATAATGTTCATATTTGTAGATATTAGAGAGGAAAATCTTGCAAAGCCCTTCCTCAGTATG
GTTGGTCTAGAAGAATCAAAAGACTCCGTGGTAGTATCTTTCAACTACAGTAGCAGCTTG
AAGTACTTGTTGGAGTCAGATACCACACCAACAAGCATAGAAGACTTTTGTTCAGGTCTT
CTGAGTGGAACTGTGTCACCATACTACAAATCACAACCAATTCCTGATAACAAGAACATG
AGCATTCTGACAGTTGTTGGTAAGACCTTTGATGAATTGATCCTGAACAGTCCCGAAAAC
ATTCTTCTAGAGATATACACACCATGGTGCATAAATTGTGAAACCACAAGCAAGCAAATG
GAGAAGTTGGCCAAGCATTTCAAAGGTTTGGACAACTTGATCTTTGCAAGGATAGATGCT
TCCCTAAATGAACATCCGAAATTACAGGTTGATGACTATCCAACTCTTCTCTTCTACTTA
GCAGATGACAAGACTAATCCAATACCACTTCCTACAAAATCAAGCACAAAAGAATTGGCT
GCTCTCATCAACAAGAATTTGAAAGAATACAGCCGTGAAATTAGAGATGAACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400004690
PEP Infomation

pacid=37463134 transcript=PGSC0003DMT400006756 locus=PGSC0003DMG400002622 ID=PGSC0003DMT400006756.v4.03 annot-version=v4.03
Sequence

MFTPKPSSRFVLFTLILLLLLSFLAPSISSELDLDDEDGDDMEGLEELIALDEEEDLQQK
PEGAHHEKQSEAEFVSKAQRIVLELNNDNTKRAIDGNEYVLVLGYTPWCARSAELMPKFA
EAATALKELGSPLLMAKIDAERYPKVASTLEIKGFPTLLLFVNGTSQPYTGGFSAEELVI
WARKKTGVPIIRISSDAEARHFLKKHTMFVVGVFEKFEGPDYDEFTKAAEMDNEIQFVET
NNAEFAKHLFPDFKPTRLFLGLVKSEPEKYTDYEGIFSTDGILQFLDDNKFPLTTVLTEL
NAARVYSNTNKLQVLIIAEPDDFKKLVEPLQDVARKFKSKIMFIFVDIREENLAKPFLSM
VGLEESKDSVVVSFNYSSSLKYLLESDTTPTSIEDFCSGLLSGTVSPYYKSQPIPDNKNM
SILTVVGKTFDELILNSPENILLEIYTPWCINCETTSKQMEKLAKHFKGLDNLIFARIDA
SLNEHPKLQVDDYPTLLFYLADDKTNPIPLPTKSSTKELAALINKNLKEYSREIRDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400006756
Transcript Infomation

pacid=37463134 locus=PGSC0003DMG400002622 ID=PGSC0003DMT400006756.v4.03 annot-version=v4.03
Sequence

ATGTTTACTCCAAAACCCTCTTCAAGATTTGTCCTTTTTACCTTAATACTTCTTCTCTTG
CTCAGCTTTTTGGCTCCATCAATTTCTTCTGAGCTTGACTTAGATGATGAAGATGGTGAT
GACATGGAAGGTTTGGAAGAACTCATAGCATTGGATGAAGAAGAAGATTTGCAGCAAAAA
CCGGAAGGGGCGCATCATGAGAAGCAATCTGAAGCTGAGTTTGTAAGTAAGGCACAAAGA
ATAGTACTTGAGCTTAATAATGACAATACTAAGAGGGCAATTGATGGAAATGAGTATGTT
TTGGTTCTGGGTTACACTCCCTGGTGCGCCAGGAGTGCGGAGTTAATGCCGAAATTTGCT
GAGGCTGCTACTGCTCTCAAAGAATTGGGGAGTCCGCTTTTGATGGCGAAGATTGATGCT
GAACGATACCCTAAAGTTGCTTCTACTCTCGAGATCAAAGGGTTCCCGACTTTGCTTCTG
TTTGTCAATGGCACTTCTCAACCTTACACTGGTGGATTCTCCGCGGAAGAACTTGTTATC
TGGGCAAGGAAGAAGACAGGTGTACCTATTATTAGAATTAGCTCAGATGCTGAAGCAAGA
CACTTTCTCAAGAAGCATACCATGTTTGTGGTTGGTGTGTTTGAGAAATTTGAGGGACCT
GATTATGATGAATTTACAAAAGCAGCTGAAATGGACAATGAAATTCAGTTTGTGGAAACT
AACAATGCAGAATTTGCCAAGCACCTCTTCCCTGATTTTAAGCCAACCAGACTTTTCCTT
GGTCTAGTTAAAAGTGAGCCAGAGAAATACACTGATTATGAAGGAATCTTCAGTACAGAT
GGAATCTTACAGTTTTTGGATGATAACAAGTTCCCCTTAACTACAGTACTTACTGAACTT
AACGCTGCTAGAGTTTACTCCAACACAAACAAACTTCAGGTGTTGATAATTGCTGAGCCT
GATGACTTCAAGAAACTTGTGGAACCTTTGCAAGACGTTGCAAGAAAGTTCAAATCAAAG
ATAATGTTCATATTTGTAGATATTAGAGAGGAAAATCTTGCAAAGCCCTTCCTCAGTATG
GTTGGTCTAGAAGAATCAAAAGACTCCGTGGTAGTATCTTTCAACTACAGTAGCAGCTTG
AAGTACTTGTTGGAGTCAGATACCACACCAACAAGCATAGAAGACTTTTGTTCAGGTCTT
CTGAGTGGAACTGTGTCACCATACTACAAATCACAACCAATTCCTGATAACAAGAACATG
AGCATTCTGACAGTTGTTGGTAAGACCTTTGATGAATTGATCCTGAACAGTCCCGAAAAC
ATTCTTCTAGAGATATACACACCATGGTGCATAAATTGTGAAACCACAAGCAAGCAAATG
GAGAAGTTGGCCAAGCATTTCAAAGGTTTGGACAACTTGATCTTTGCAAGGATAGATGCT
TCCCTAAATGAACATCCGAAATTACAGGTTGATGACTATCCAACTCTTCTCTTCTACTTA
GCAGATGACAAGACTAATCCAATACCACTTCCTACAAAATCAAGCACAAAAGAATTGGCT
GCTCTCATCAACAAGAATTTGAAAGAATACAGCCGTGAAATTAGAGATGAACTATAG