Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006683
CDS Infomation

pacid=37462795 polypeptide=PGSC0003DMP400004641 locus=PGSC0003DMG400002598 ID=PGSC0003DMT400006683.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTTCTGGTGAGTCTGTTGTCAAAGCTATTGATGCGTCGGTTGGGGGGCTGGTG
TGGGTCCGTAGGCGAAATGGGTCGTGGTGGCCTGGTCGGATTTTGGGCTCAGATGAGTTA
CCTCAGAGTTGCTCTGTTTCACCAAGATTAGGGACTCCCGTTAAGCTACTTGGAAGAGAG
GATGCAAGTGTGGACTGGTACAATCTTGAAAAATCTAAGCGGGTGAAAGCCTTCCGTTGT
GGGGAATATGATGAATGTATTGAGAAAGCTAAGGCTGCTGCTTCTAACTCCTCAAAAAAG
GCTGTCAAATATGCTCGAAGAGAGGATGCCATTATTCATGCTCTAGAGATTGAAAGTGCT
CGTCTCGGGAAAGACCATCCAGATTTTTTCTCAAGAATAGATAAAGAAGGTGGAGAGCAT
CATACCATGGAAGAATCACATACTTCTTCTAATCCTCTTGAAGATGGTAAAGAGTTAGAT
GAGGAACTGAATAGTTCCGAAAATAATTCCAATTCTGCTCAAGAATTGTCTCAATCTGGT
GTATCATTTGAGGCACCAAATCTTACAATTGCGTCTGAGGAGCAACCTGTGTGTGGGACA
CGGAGGAGAACACCAAACGACTCAGAGGATGATGGAACCGAGGGAAGTAAACGCATGAAA
GGACTTGATGACCTGGGAATGGGTGTCGTGTCATCTCTGAAAAGGAAGCGATCTCAGGTG
GCACATGTTCATGATTTCTTAAAGAAGAAGAACCGTCGCCGTCCCTTGACAAAGGTTTTG
GAGAGTACAGCAATGGTGTCTGTTCCTATCACGTGTGAACAACTTCCCAGTCCAACTGGC
TCTACTCTTGCAGGGGTATCTGAAAGCAAAGTTTTTGCGTTACAATCTAACGAGTCTGGG
AATTTTTTTCCTACAGTACTAAATAATGACACAGATATTATCTCAGAGAATGGGAAGCCA
TTGGATGCATTTGGCCACCCTCGTGATTCTTCCCTTGTTAAGCATGAACAGAAAGAGAAT
GGAATTTCCAGTATTTCGGGGTTGCCTGAGAGTGGTTCTTCTGACAGGTTGTTTGATGTG
CCCTTAGTTGCAGAAGAGAAGCAATCTGCAGGCTTGTCTCCTATAGTATCTCAGAAAGCT
CAAGGTGGTGTAGGGGCACAGTCTAGCCAGAGCAGCCAAGTTGAAGCTATGTCGTTTGGA
AGTGAGGAGCTTAATGACTCTGGCTCCACTAGTTCTGGTAGTGAAGATTTTCATTGTTTC
AGCCAGGGGATGGTGAAAGGAACTTCAAAATGGCAGTTGAAAGGAAAGAGGAATTTGAGG
CACACATGTCGGAAAGTAGACAACTATCGTTCGAAGTCAAGACCAGTTACGGAAATTCAA
GTGGATGAGTTGCGAGGTTGGAGCAGGAATGTTTCTCTTAGAGAAGCTCAAATGAAGGGG
CCAACTGCAGACCTGCTTACTCCACAGAGGTTGCTACCCTATCGTCAGTCTAGATTTACA
GTTAACCCCAAATATGAGTCATCAGATTTCTCTCTTAGGCACCACATTGCTGATTCTTCA
TTGTATGATGTTAATCTTGAGGTCAAAGCCAGCTATCGTCCACAGCATGTTCCATATATC
TCCTTAATGAGCAAATTGAATGGTCAGCCTATCATAGGTCACCCCCTCACAGTTGAAGTC
TTGGATGATGGCTTTTGTGATAATCTGCTAGTCAGTGGATCCGAGTACTATAGTAGCAGC
TATGACTTAGATGAGGATCATGGTGAGAACAGCTCAGTTTTGCATAGTGCGGATATTGTT
TATGAATCCAAGCCGAGTTCTGCGGGCAGGACTTCGACTAAGCATCGCATGGTGAAACCT
CGTAGTTCACCAACAAAGTCACCCAAGACACGGAAAAATGGCCTCCTTTCAAAGAAGATT
AGAAAATTGTCTTCTTTAACCGGTTCTCACCAGCAAAATAGAGAGAAGAAACCTGTAGTA
GAGAAGGTTAAAGGACCTGCGGTAGCTTGTGTCCCCTTGAAAATAGTGTTCAGTAGGATA
AGTGAAGCATTAAATAACTCAATACGACCTGCCCACCGTTCTCTTGTACCAAGCATTGGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400004641
PEP Infomation

pacid=37462795 transcript=PGSC0003DMT400006683 locus=PGSC0003DMG400002598 ID=PGSC0003DMT400006683.v4.03 annot-version=v4.03
Sequence

MGSSGESVVKAIDASVGGLVWVRRRNGSWWPGRILGSDELPQSCSVSPRLGTPVKLLGRE
DASVDWYNLEKSKRVKAFRCGEYDECIEKAKAAASNSSKKAVKYARREDAIIHALEIESA
RLGKDHPDFFSRIDKEGGEHHTMEESHTSSNPLEDGKELDEELNSSENNSNSAQELSQSG
VSFEAPNLTIASEEQPVCGTRRRTPNDSEDDGTEGSKRMKGLDDLGMGVVSSLKRKRSQV
AHVHDFLKKKNRRRPLTKVLESTAMVSVPITCEQLPSPTGSTLAGVSESKVFALQSNESG
NFFPTVLNNDTDIISENGKPLDAFGHPRDSSLVKHEQKENGISSISGLPESGSSDRLFDV
PLVAEEKQSAGLSPIVSQKAQGGVGAQSSQSSQVEAMSFGSEELNDSGSTSSGSEDFHCF
SQGMVKGTSKWQLKGKRNLRHTCRKVDNYRSKSRPVTEIQVDELRGWSRNVSLREAQMKG
PTADLLTPQRLLPYRQSRFTVNPKYESSDFSLRHHIADSSLYDVNLEVKASYRPQHVPYI
SLMSKLNGQPIIGHPLTVEVLDDGFCDNLLVSGSEYYSSSYDLDEDHGENSSVLHSADIV
YESKPSSAGRTSTKHRMVKPRSSPTKSPKTRKNGLLSKKIRKLSSLTGSHQQNREKKPVV
EKVKGPAVACVPLKIVFSRISEALNNSIRPAHRSLVPSIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400006683
Transcript Infomation

pacid=37462795 locus=PGSC0003DMG400002598 ID=PGSC0003DMT400006683.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTTCTGGTGAGTCTGTTGTCAAAGCTATTGATGCGTCGGTTGGGGGGCTGGTG
TGGGTCCGTAGGCGAAATGGGTCGTGGTGGCCTGGTCGGATTTTGGGCTCAGATGAGTTA
CCTCAGAGTTGCTCTGTTTCACCAAGATTAGGGACTCCCGTTAAGCTACTTGGAAGAGAG
GATGCAAGTGTGGACTGGTACAATCTTGAAAAATCTAAGCGGGTGAAAGCCTTCCGTTGT
GGGGAATATGATGAATGTATTGAGAAAGCTAAGGCTGCTGCTTCTAACTCCTCAAAAAAG
GCTGTCAAATATGCTCGAAGAGAGGATGCCATTATTCATGCTCTAGAGATTGAAAGTGCT
CGTCTCGGGAAAGACCATCCAGATTTTTTCTCAAGAATAGATAAAGAAGGTGGAGAGCAT
CATACCATGGAAGAATCACATACTTCTTCTAATCCTCTTGAAGATGGTAAAGAGTTAGAT
GAGGAACTGAATAGTTCCGAAAATAATTCCAATTCTGCTCAAGAATTGTCTCAATCTGGT
GTATCATTTGAGGCACCAAATCTTACAATTGCGTCTGAGGAGCAACCTGTGTGTGGGACA
CGGAGGAGAACACCAAACGACTCAGAGGATGATGGAACCGAGGGAAGTAAACGCATGAAA
GGACTTGATGACCTGGGAATGGGTGTCGTGTCATCTCTGAAAAGGAAGCGATCTCAGGTG
GCACATGTTCATGATTTCTTAAAGAAGAAGAACCGTCGCCGTCCCTTGACAAAGGTTTTG
GAGAGTACAGCAATGGTGTCTGTTCCTATCACGTGTGAACAACTTCCCAGTCCAACTGGC
TCTACTCTTGCAGGGGTATCTGAAAGCAAAGTTTTTGCGTTACAATCTAACGAGTCTGGG
AATTTTTTTCCTACAGTACTAAATAATGACACAGATATTATCTCAGAGAATGGGAAGCCA
TTGGATGCATTTGGCCACCCTCGTGATTCTTCCCTTGTTAAGCATGAACAGAAAGAGAAT
GGAATTTCCAGTATTTCGGGGTTGCCTGAGAGTGGTTCTTCTGACAGGTTGTTTGATGTG
CCCTTAGTTGCAGAAGAGAAGCAATCTGCAGGCTTGTCTCCTATAGTATCTCAGAAAGCT
CAAGGTGGTGTAGGGGCACAGTCTAGCCAGAGCAGCCAAGTTGAAGCTATGTCGTTTGGA
AGTGAGGAGCTTAATGACTCTGGCTCCACTAGTTCTGGTAGTGAAGATTTTCATTGTTTC
AGCCAGGGGATGGTGAAAGGAACTTCAAAATGGCAGTTGAAAGGAAAGAGGAATTTGAGG
CACACATGTCGGAAAGTAGACAACTATCGTTCGAAGTCAAGACCAGTTACGGAAATTCAA
GTGGATGAGTTGCGAGGTTGGAGCAGGAATGTTTCTCTTAGAGAAGCTCAAATGAAGGGG
CCAACTGCAGACCTGCTTACTCCACAGAGGTTGCTACCCTATCGTCAGTCTAGATTTACA
GTTAACCCCAAATATGAGTCATCAGATTTCTCTCTTAGGCACCACATTGCTGATTCTTCA
TTGTATGATGTTAATCTTGAGGTCAAAGCCAGCTATCGTCCACAGCATGTTCCATATATC
TCCTTAATGAGCAAATTGAATGGTCAGCCTATCATAGGTCACCCCCTCACAGTTGAAGTC
TTGGATGATGGCTTTTGTGATAATCTGCTAGTCAGTGGATCCGAGTACTATAGTAGCAGC
TATGACTTAGATGAGGATCATGGTGAGAACAGCTCAGTTTTGCATAGTGCGGATATTGTT
TATGAATCCAAGCCGAGTTCTGCGGGCAGGACTTCGACTAAGCATCGCATGGTGAAACCT
CGTAGTTCACCAACAAAGTCACCCAAGACACGGAAAAATGGCCTCCTTTCAAAGAAGATT
AGAAAATTGTCTTCTTTAACCGGTTCTCACCAGCAAAATAGAGAGAAGAAACCTGTAGTA
GAGAAGGTTAAAGGACCTGCGGTAGCTTGTGTCCCCTTGAAAATAGTGTTCAGTAGGATA
AGTGAAGCATTAAATAACTCAATACGACCTGCCCACCGTTCTCTTGTACCAAGCATTGGT
TGA