Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006647
CDS Infomation

pacid=37461774 polypeptide=PGSC0003DMP400004617 locus=PGSC0003DMG400002587 ID=PGSC0003DMT400006647.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGGTTGGTCCTCTCTCTGTGATTTTCAACCTTCTTCTCTCTTTACTTGTATGC
CATCTCCACTTCACCATTCTCATTCAAGCAGGAGAAGGGAGATGGGAAGATAAGTATCCA
TTTATAAGAGAAGCAAGTACATTTTCATCATTTTCAGATTTTGGTAATTATAAAAATTCA
TATGACTATATAATAGTTGGAGGTGGAACAGCTGGTTGTCCTTTAGCAGCAACATTGTCA
ACAAAATTTAGAGTTTTATTAGTTGAAAGAGGTGGAGTTCCATTTACAAATGCAAATGTG
TCATTCATGCAAAATTTTCACATCTCTCTTGCTGACACTTCATCTACTTCCGCTTCACAA
TTCTTCGTTTCTACCGATGGCGTTTTTAATTCTAGAGCTAGAATTTTGGGCGGAGCCACT
TGCATTAACGCCGGCTTTTATACTCGCGCTGGTCCAAGTTACATTGAGAAAGCAGGATGG
GATTCTAAATTGGTGAATGAATCATATCCTTGGGTTGAGAAACAAATTGTTCAGAGACCA
AACTTGGCTCCATGGCAAGAAGCAGTAAGAGAAAGTCTACTTGAAATTGGTATCTCACCT
TTTAATGGATTCACTTATGATCACATCTATGGAACCAAGGTTGGTGGGACCATATTCGAC
CACTACGGACGTCGTCACTCTGCTGCTGAACTACTTGCCTCTGCTAATCCTAACAAGTTG
GATGTTCTGGTGCATGCCACAGTTCAAAAGATTGATTTTGATACATCAGGAAAGAAGCCA
CGGGCAGTGGGAGTCATTTTCAAAGATGAAAATGGGAAAGTACACAAGGCATTTCTTTCG
ACAAGGAAGGGAAGTGAGATTATAGTGTCATCTGGTGCAATTGGGAGCCCTCATATTCTG
ATGCTTAGTGGAATCGGACCAAAGGCCGAGTTGGAAAAGTTCAACATCACAGTGGTGCTT
GACAATAAGTTTGTTGGTCAAGGCATGTCAGATAACCCCTTGAACACGATCTTCGTCCCC
ACAAATAGGCCTGTTGAACAGTCACTGATTCAGACTGTAGGGATTACTAAAAAGGGAGTC
TATATTGAAGCTAGCAGTGGATTTGGGCAGTCCGGAGATAGCATCAGTTGCCATCATGGA
GTTGCTTCAGCTGAGATTGGGCAACTGTCCACCATTCCTCCAAAGCAGAGAACAGTAGAA
GCAATCGAAGCATATCGAAGAAGCAAGAAAAACATACCACACGAGGCGTTCAGGGGAGGT
TTCATCTTAGAAAAGATAGCATTACCTTTGTCAAGAGGGAACATTAGCCTGGTGACTACC
AATCCTGACGACAACCCTTCCATCACCTTCAACTACTTCAGCCATCCACGTGATCTAAAA
CGATGTGTAGATGGTATACGCATTATGGAGAAGATCGCGAAATCTAAACACTTCACCAAC
TTCACACAGTGTAACAAAGAGACACTAGATAGGCTGCTTAACATGAGTGTCCAAGCTAAT
GTTAATCTAATACCAAAACACACTCATAACACCGAGTCCTTAGAGCAGTTCTGCAAAGAC
ACTGTGATCACAATATGGCATTACCATGGTGGATGTCAAGTTGGAAAGGTGATCGCCCCC
GATCACAAGGTTCTTGGTGTCCATAGGCTCCGTGTCATCGATGGTTCAACATTCAAAGAG
TCGCCAGGCACAAATCCTCAAGCCACAGTGATGATGATGGGCAGGTACATGGGAGTGAAG
ATTCTAAGAGAGAGATTAGGAAAAGCAGCTGGTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004617
PEP Infomation

pacid=37461774 transcript=PGSC0003DMT400006647 locus=PGSC0003DMG400002587 ID=PGSC0003DMT400006647.v4.03 annot-version=v4.03
Sequence

MAVVGPLSVIFNLLLSLLVCHLHFTILIQAGEGRWEDKYPFIREASTFSSFSDFGNYKNS
YDYIIVGGGTAGCPLAATLSTKFRVLLVERGGVPFTNANVSFMQNFHISLADTSSTSASQ
FFVSTDGVFNSRARILGGATCINAGFYTRAGPSYIEKAGWDSKLVNESYPWVEKQIVQRP
NLAPWQEAVRESLLEIGISPFNGFTYDHIYGTKVGGTIFDHYGRRHSAAELLASANPNKL
DVLVHATVQKIDFDTSGKKPRAVGVIFKDENGKVHKAFLSTRKGSEIIVSSGAIGSPHIL
MLSGIGPKAELEKFNITVVLDNKFVGQGMSDNPLNTIFVPTNRPVEQSLIQTVGITKKGV
YIEASSGFGQSGDSISCHHGVASAEIGQLSTIPPKQRTVEAIEAYRRSKKNIPHEAFRGG
FILEKIALPLSRGNISLVTTNPDDNPSITFNYFSHPRDLKRCVDGIRIMEKIAKSKHFTN
FTQCNKETLDRLLNMSVQANVNLIPKHTHNTESLEQFCKDTVITIWHYHGGCQVGKVIAP
DHKVLGVHRLRVIDGSTFKESPGTNPQATVMMMGRYMGVKILRERLGKAAGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400006647
Transcript Infomation

pacid=37461774 locus=PGSC0003DMG400002587 ID=PGSC0003DMT400006647.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGGTTGGTCCTCTCTCTGTGATTTTCAACCTTCTTCTCTCTTTACTTGTATGC
CATCTCCACTTCACCATTCTCATTCAAGCAGGAGAAGGGAGATGGGAAGATAAGTATCCA
TTTATAAGAGAAGCAAGTACATTTTCATCATTTTCAGATTTTGGTAATTATAAAAATTCA
TATGACTATATAATAGTTGGAGGTGGAACAGCTGGTTGTCCTTTAGCAGCAACATTGTCA
ACAAAATTTAGAGTTTTATTAGTTGAAAGAGGTGGAGTTCCATTTACAAATGCAAATGTG
TCATTCATGCAAAATTTTCACATCTCTCTTGCTGACACTTCATCTACTTCCGCTTCACAA
TTCTTCGTTTCTACCGATGGCGTTTTTAATTCTAGAGCTAGAATTTTGGGCGGAGCCACT
TGCATTAACGCCGGCTTTTATACTCGCGCTGGTCCAAGTTACATTGAGAAAGCAGGATGG
GATTCTAAATTGGTGAATGAATCATATCCTTGGGTTGAGAAACAAATTGTTCAGAGACCA
AACTTGGCTCCATGGCAAGAAGCAGTAAGAGAAAGTCTACTTGAAATTGGTATCTCACCT
TTTAATGGATTCACTTATGATCACATCTATGGAACCAAGGTTGGTGGGACCATATTCGAC
CACTACGGACGTCGTCACTCTGCTGCTGAACTACTTGCCTCTGCTAATCCTAACAAGTTG
GATGTTCTGGTGCATGCCACAGTTCAAAAGATTGATTTTGATACATCAGGAAAGAAGCCA
CGGGCAGTGGGAGTCATTTTCAAAGATGAAAATGGGAAAGTACACAAGGCATTTCTTTCG
ACAAGGAAGGGAAGTGAGATTATAGTGTCATCTGGTGCAATTGGGAGCCCTCATATTCTG
ATGCTTAGTGGAATCGGACCAAAGGCCGAGTTGGAAAAGTTCAACATCACAGTGGTGCTT
GACAATAAGTTTGTTGGTCAAGGCATGTCAGATAACCCCTTGAACACGATCTTCGTCCCC
ACAAATAGGCCTGTTGAACAGTCACTGATTCAGACTGTAGGGATTACTAAAAAGGGAGTC
TATATTGAAGCTAGCAGTGGATTTGGGCAGTCCGGAGATAGCATCAGTTGCCATCATGGA
GTTGCTTCAGCTGAGATTGGGCAACTGTCCACCATTCCTCCAAAGCAGAGAACAGTAGAA
GCAATCGAAGCATATCGAAGAAGCAAGAAAAACATACCACACGAGGCGTTCAGGGGAGGT
TTCATCTTAGAAAAGATAGCATTACCTTTGTCAAGAGGGAACATTAGCCTGGTGACTACC
AATCCTGACGACAACCCTTCCATCACCTTCAACTACTTCAGCCATCCACGTGATCTAAAA
CGATGTGTAGATGGTATACGCATTATGGAGAAGATCGCGAAATCTAAACACTTCACCAAC
TTCACACAGTGTAACAAAGAGACACTAGATAGGCTGCTTAACATGAGTGTCCAAGCTAAT
GTTAATCTAATACCAAAACACACTCATAACACCGAGTCCTTAGAGCAGTTCTGCAAAGAC
ACTGTGATCACAATATGGCATTACCATGGTGGATGTCAAGTTGGAAAGGTGATCGCCCCC
GATCACAAGGTTCTTGGTGTCCATAGGCTCCGTGTCATCGATGGTTCAACATTCAAAGAG
TCGCCAGGCACAAATCCTCAAGCCACAGTGATGATGATGGGCAGGTACATGGGAGTGAAG
ATTCTAAGAGAGAGATTAGGAAAAGCAGCTGGTTTGTAA