Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006641
CDS Infomation

pacid=37463078 polypeptide=PGSC0003DMP400004612 locus=PGSC0003DMG400002584 ID=PGSC0003DMT400006641.v4.03 annot-version=v4.03
Sequence

ATGACGACGACGAAGATGATAATCGAGAAAGTGGAATTAGGAACGGTGAATGCATCAGCA
TCACCGGCTTACAAATCGCCCTTCACCATCGGCGATGAAGTCGAGGTTAGTAGAGAGGAA
GTGGGTTATAGTGGAGCTCGCTACGAAGCTGTCATTGTTGAACCATTGAAGCCAGCGGCT
CCGTCTCCGTACCGTAAAAGCGAAAATAAGAAAAGGGGTTTTTGGGTTCAGTACAAGCAT
TTGTTATCTGACCAAGGTCAATCGGTATCTAAACGCGAGTTCGTCAGAAAACAGTCCCTT
ATACGACCCGCACAACCGGTTGCGAAGTGGGATCAGCGGCGGTCTTTTCGAGTGGGCGAT
GTTGTTGATGCATTTCATCTTGCAGGGTGGTGGACTGGGGTTGTTGTTTCAATTGTTTGG
GATGATGGTAGTAATAATGGTTGTAGGTTCCGGGTTGCTTTCAAGGACCCGGATGAGGAG
ATTGAATTTTCTGAACATGACTTGAGGTTTCATCTGGATTGGGTTGGTGGAAATTGGGTC
CGTCCTGATCCGCCGCATGAAAAGATGTCTCTTCAATTGGGAACTCCAAGTCCTACATTA
AATCATATGATCAAGGGAACAACCTCTTCTAAGATGAAACTGGAAACAGATACTAGGACT
GATGAGGTACGGCCTCCGAAGAAGTTAAGAAGTAGAAAACATATTGTAGAAGCTTTGGAG
AATCAAGAATTACCCAGGCCTTTTGTATCTGGGAAGGCATTTACTAGAAAATCAAGATTA
CTTGATTTTGTAGAAAACCAAGATTACTTTGAAAGTGTGGTTGATGTGGGAATCCTTTCA
CCCTGTGTCCAGTCTCTCCAGCACACCGGAGATGAGGATGCGAACCTAAGTGATTTTGAA
TTTCCAATTATTGAGGGAAGCAGAAAAAGAAGTACCATGGACCTGTCTGCCCATAGATCA
CTTGCTGTGACACAAGGTGTGGAGAAACAAGTACTTGAAAGCACTCTCCATGACTCGTTT
AATGAACAAAATGCAACAAATCAAGCCGAGTTATCTTCAAGAAAAACTGATGGGATAAAT
ACTTCAGCAGGAGCCTCTGCTGCAGCAGTCCAACCATGTGCTGGGACCACTATGCCTGAG
ATTGAGCCGAGGTTGGTACTACCATTTAAGAAGAACTCTGCTCTTTGGAGAGAATTTGAA
TCCATGGAAGTATTTAGAAAAATTCCGCAAAATCCACATTTTTCACCTTTAGCACAATAT
GAGGAGAATAAACGAGAAGAAGTAGCTTTACTGAAGATGACGAAGTATGTTTTTTTTGTT
GAGAGGATACCAAAGTTAACCGTTGCTGAACTTAGTAGTTCAGTTCTCATTAGTGAGATG
CTGGACACTATCAAGGACTTGGAGGAGTATGGATTTGATCTAATACCGATTAAATGTCAT
TTGAATGATTTGATGTTGAACAACGAGAAGCAAACTCAGCTCCGAAGCAAGTTGGAAGAA
GAGGAGGGTAAACTCAAAAAATGCCGCCTTGACAAAGCAGTTGCTAAAAACGAGATTAAC
AAGATTGCTTTGAAGATAAAGGATCTAGAGAAACAACTTATGTCAGCCAAAACCATGATC
GAGACAATGGAGCATCATATCAAGGTATCAGGATCTTTAAAGGGTGACATTTGTGATGAC
ATTCGTCACGCTGAGCGTGATTTTGAAGCAACAGTGGCTTCAGTGAAGCAAATCTTCAGC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400004612
PEP Infomation

pacid=37463078 transcript=PGSC0003DMT400006641 locus=PGSC0003DMG400002584 ID=PGSC0003DMT400006641.v4.03 annot-version=v4.03
Sequence

MTTTKMIIEKVELGTVNASASPAYKSPFTIGDEVEVSREEVGYSGARYEAVIVEPLKPAA
PSPYRKSENKKRGFWVQYKHLLSDQGQSVSKREFVRKQSLIRPAQPVAKWDQRRSFRVGD
VVDAFHLAGWWTGVVVSIVWDDGSNNGCRFRVAFKDPDEEIEFSEHDLRFHLDWVGGNWV
RPDPPHEKMSLQLGTPSPTLNHMIKGTTSSKMKLETDTRTDEVRPPKKLRSRKHIVEALE
NQELPRPFVSGKAFTRKSRLLDFVENQDYFESVVDVGILSPCVQSLQHTGDEDANLSDFE
FPIIEGSRKRSTMDLSAHRSLAVTQGVEKQVLESTLHDSFNEQNATNQAELSSRKTDGIN
TSAGASAAAVQPCAGTTMPEIEPRLVLPFKKNSALWREFESMEVFRKIPQNPHFSPLAQY
EENKREEVALLKMTKYVFFVERIPKLTVAELSSSVLISEMLDTIKDLEEYGFDLIPIKCH
LNDLMLNNEKQTQLRSKLEEEEGKLKKCRLDKAVAKNEINKIALKIKDLEKQLMSAKTMI
ETMEHHIKVSGSLKGDICDDIRHAERDFEATVASVKQIFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400006641
Transcript Infomation

pacid=37463078 locus=PGSC0003DMG400002584 ID=PGSC0003DMT400006641.v4.03 annot-version=v4.03
Sequence

ATGACGACGACGAAGATGATAATCGAGAAAGTGGAATTAGGAACGGTGAATGCATCAGCA
TCACCGGCTTACAAATCGCCCTTCACCATCGGCGATGAAGTCGAGGTTAGTAGAGAGGAA
GTGGGTTATAGTGGAGCTCGCTACGAAGCTGTCATTGTTGAACCATTGAAGCCAGCGGCT
CCGTCTCCGTACCGTAAAAGCGAAAATAAGAAAAGGGGTTTTTGGGTTCAGTACAAGCAT
TTGTTATCTGACCAAGGTCAATCGGTATCTAAACGCGAGTTCGTCAGAAAACAGTCCCTT
ATACGACCCGCACAACCGGTTGCGAAGTGGGATCAGCGGCGGTCTTTTCGAGTGGGCGAT
GTTGTTGATGCATTTCATCTTGCAGGGTGGTGGACTGGGGTTGTTGTTTCAATTGTTTGG
GATGATGGTAGTAATAATGGTTGTAGGTTCCGGGTTGCTTTCAAGGACCCGGATGAGGAG
ATTGAATTTTCTGAACATGACTTGAGGTTTCATCTGGATTGGGTTGGTGGAAATTGGGTC
CGTCCTGATCCGCCGCATGAAAAGATGTCTCTTCAATTGGGAACTCCAAGTCCTACATTA
AATCATATGATCAAGGGAACAACCTCTTCTAAGATGAAACTGGAAACAGATACTAGGACT
GATGAGGTACGGCCTCCGAAGAAGTTAAGAAGTAGAAAACATATTGTAGAAGCTTTGGAG
AATCAAGAATTACCCAGGCCTTTTGTATCTGGGAAGGCATTTACTAGAAAATCAAGATTA
CTTGATTTTGTAGAAAACCAAGATTACTTTGAAAGTGTGGTTGATGTGGGAATCCTTTCA
CCCTGTGTCCAGTCTCTCCAGCACACCGGAGATGAGGATGCGAACCTAAGTGATTTTGAA
TTTCCAATTATTGAGGGAAGCAGAAAAAGAAGTACCATGGACCTGTCTGCCCATAGATCA
CTTGCTGTGACACAAGGTGTGGAGAAACAAGTACTTGAAAGCACTCTCCATGACTCGTTT
AATGAACAAAATGCAACAAATCAAGCCGAGTTATCTTCAAGAAAAACTGATGGGATAAAT
ACTTCAGCAGGAGCCTCTGCTGCAGCAGTCCAACCATGTGCTGGGACCACTATGCCTGAG
ATTGAGCCGAGGTTGGTACTACCATTTAAGAAGAACTCTGCTCTTTGGAGAGAATTTGAA
TCCATGGAAGTATTTAGAAAAATTCCGCAAAATCCACATTTTTCACCTTTAGCACAATAT
GAGGAGAATAAACGAGAAGAAGTAGCTTTACTGAAGATGACGAAGTATGTTTTTTTTGTT
GAGAGGATACCAAAGTTAACCGTTGCTGAACTTAGTAGTTCAGTTCTCATTAGTGAGATG
CTGGACACTATCAAGGACTTGGAGGAGTATGGATTTGATCTAATACCGATTAAATGTCAT
TTGAATGATTTGATGTTGAACAACGAGAAGCAAACTCAGCTCCGAAGCAAGTTGGAAGAA
GAGGAGGGTAAACTCAAAAAATGCCGCCTTGACAAAGCAGTTGCTAAAAACGAGATTAAC
AAGATTGCTTTGAAGATAAAGGATCTAGAGAAACAACTTATGTCAGCCAAAACCATGATC
GAGACAATGGAGCATCATATCAAGGTATCAGGATCTTTAAAGGGTGACATTTGTGATGAC
ATTCGTCACGCTGAGCGTGATTTTGAAGCAACAGTGGCTTCAGTGAAGCAAATCTTCAGC
TGA