Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006639
CDS Infomation

pacid=37461536 polypeptide=PGSC0003DMP400004610 locus=PGSC0003DMG400002583 ID=PGSC0003DMT400006639.v4.03 annot-version=v4.03
Sequence

ATGGGATATGCTAGTAGTGTTTGGCTTGGAGTTTTGGTATTCATTTCAATTCATGGCTAT
GGCAATATTAGACTATTTGAGGCTTCTTCTCGTGTCATACAGACACCCGATCAGATATAC
CGCACTGGTTATCATTTTCAACCTGCCAAGTATTGGATGAACGATCCTAATGGACCAATG
ATATACATGGGGATTTACCATTTCTTCTATCAGTACAATCCTTACGATGCACAAGCAGGT
AACATAGTATGGGGCCATTCCACATCGACCGATCTCGTCAACTGGACGCCTCAGCCGCCG
GCGCTTCTCCGATCAGAGCCTTACGATTTCAAAGGCTGTTTTTCCGGTTCTACAACTCTT
CTCTCCGGCGGAAAACCGGCGATTCTCTACACCGGCGTAGATTTCTCCGATAACCAGGTA
CAAAATCTAGCAGTCCCCAAAAATTTAGCTGACCCGTACCTTACCGAATGGGTAAAATCG
CCTTACAATCCATTAATCGCACCGAATTCGGTAAACAAAATTGATGGACAAAATTTCAGA
GATCCAACTACTGCTTGGCTAAATCCTGACGGAAATTGGAGAATGGTAGTTGGAAATCAA
CAAGACGGAAACGGAATTGGCTTATTGTATAGAAGCAAAAACTTCATTGATTGGATTCAA
GCTGAAAATCCACTGCATTTTATGAACTATTCTGGAATGTGGGAATGCCCTGATTTTTTC
CCTGTTTCAACAATCAGTCAAAATGGTCTAGAAACTTCTACAATGGGTCCAAATGTGAAA
CATGTATTCAAGGCAAGTAAAGCAAGCACTGATTTCTACACAGTTGGTACATATAATCCG
AATAAAGATATTTTTATCCCGGATAACAAATCACTTGATATTGGATTAGGATTTCGTTAC
GATTATGGTAAATTTTATGCATCGAAAAGTTTTTTCGAGAGTTCTACTAGTAGGAGGATT
TTGTTTGGATGGGTTAATGAATCAGTAAATAATCTTGAGATGAATAGTATTAGAGGATGG
GCTGGTCTTCAAGGAATTCCTAGAAGGATTTGGCTTCATAAATCTGGAAATCAGCTGCTT
CAATGGCCGATAGTTGAAATTGAAAAGCTTCGAATGAATCCAGTTATTGAAGATACTTCT
GTGCTTATGCCAGGATCCATACGTGAAATTTCTGGAGTCAATGCTACGCAGGCAGATATA
GAAATGTCATTTTCAGCTAAAACGTTGGAAAAGGCAGAGAAATGGGAAGCAAATTGGACA
AATCCACAACAAGTGTGTAGCACAAAAGGTGCATCAGTAAAAGGTGGGATTGGGCCATTT
GGGTTACTAGTCTTGGCATCTAAAGACATGCAAGAATATACTGCAATTTTCTTCAGAATT
TTCAGAGGAGATAACAACAATTTTATAGTCCTCATGTGTAGTGACCAGACCAGGTCTTCC
TTACACTTGCCTTCTAGTGATTATGACAAAACAACTTATGGGGCCTTGTTGAATGTGGAT
CCTCTTCAAGAAAAATTGTCTCTCAGGACTTTGATTGATCACTCAATAGTGGAGAGCTTT
GGTGGAGAAGGAAAAGCTTGCATTACAGCTAGGGTTTACCCAACTAATTTAGCAGTGGAT
GGTGCAACCCATTTATATGTCTTCAATAATGGTTCACAGAGTGTTGACATCTCAAAATTG
ACTGCTTGGAGCATGAAAACAGCTCAAATCAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004610
PEP Infomation

pacid=37461536 transcript=PGSC0003DMT400006639 locus=PGSC0003DMG400002583 ID=PGSC0003DMT400006639.v4.03 annot-version=v4.03
Sequence

MGYASSVWLGVLVFISIHGYGNIRLFEASSRVIQTPDQIYRTGYHFQPAKYWMNDPNGPM
IYMGIYHFFYQYNPYDAQAGNIVWGHSTSTDLVNWTPQPPALLRSEPYDFKGCFSGSTTL
LSGGKPAILYTGVDFSDNQVQNLAVPKNLADPYLTEWVKSPYNPLIAPNSVNKIDGQNFR
DPTTAWLNPDGNWRMVVGNQQDGNGIGLLYRSKNFIDWIQAENPLHFMNYSGMWECPDFF
PVSTISQNGLETSTMGPNVKHVFKASKASTDFYTVGTYNPNKDIFIPDNKSLDIGLGFRY
DYGKFYASKSFFESSTSRRILFGWVNESVNNLEMNSIRGWAGLQGIPRRIWLHKSGNQLL
QWPIVEIEKLRMNPVIEDTSVLMPGSIREISGVNATQADIEMSFSAKTLEKAEKWEANWT
NPQQVCSTKGASVKGGIGPFGLLVLASKDMQEYTAIFFRIFRGDNNNFIVLMCSDQTRSS
LHLPSSDYDKTTYGALLNVDPLQEKLSLRTLIDHSIVESFGGEGKACITARVYPTNLAVD
GATHLYVFNNGSQSVDISKLTAWSMKTAQIN*

Transcript Sequence

Transcript ID

PGSC0003DMT400006639
Transcript Infomation

pacid=37461536 locus=PGSC0003DMG400002583 ID=PGSC0003DMT400006639.v4.03 annot-version=v4.03
Sequence

ATGGGATATGCTAGTAGTGTTTGGCTTGGAGTTTTGGTATTCATTTCAATTCATGGCTAT
GGCAATATTAGACTATTTGAGGCTTCTTCTCGTGTCATACAGACACCCGATCAGATATAC
CGCACTGGTTATCATTTTCAACCTGCCAAGTATTGGATGAACGATCCTAATGGACCAATG
ATATACATGGGGATTTACCATTTCTTCTATCAGTACAATCCTTACGATGCACAAGCAGGT
AACATAGTATGGGGCCATTCCACATCGACCGATCTCGTCAACTGGACGCCTCAGCCGCCG
GCGCTTCTCCGATCAGAGCCTTACGATTTCAAAGGCTGTTTTTCCGGTTCTACAACTCTT
CTCTCCGGCGGAAAACCGGCGATTCTCTACACCGGCGTAGATTTCTCCGATAACCAGGTA
CAAAATCTAGCAGTCCCCAAAAATTTAGCTGACCCGTACCTTACCGAATGGGTAAAATCG
CCTTACAATCCATTAATCGCACCGAATTCGGTAAACAAAATTGATGGACAAAATTTCAGA
GATCCAACTACTGCTTGGCTAAATCCTGACGGAAATTGGAGAATGGTAGTTGGAAATCAA
CAAGACGGAAACGGAATTGGCTTATTGTATAGAAGCAAAAACTTCATTGATTGGATTCAA
GCTGAAAATCCACTGCATTTTATGAACTATTCTGGAATGTGGGAATGCCCTGATTTTTTC
CCTGTTTCAACAATCAGTCAAAATGGTCTAGAAACTTCTACAATGGGTCCAAATGTGAAA
CATGTATTCAAGGCAAGTAAAGCAAGCACTGATTTCTACACAGTTGGTACATATAATCCG
AATAAAGATATTTTTATCCCGGATAACAAATCACTTGATATTGGATTAGGATTTCGTTAC
GATTATGGTAAATTTTATGCATCGAAAAGTTTTTTCGAGAGTTCTACTAGTAGGAGGATT
TTGTTTGGATGGGTTAATGAATCAGTAAATAATCTTGAGATGAATAGTATTAGAGGATGG
GCTGGTCTTCAAGGAATTCCTAGAAGGATTTGGCTTCATAAATCTGGAAATCAGCTGCTT
CAATGGCCGATAGTTGAAATTGAAAAGCTTCGAATGAATCCAGTTATTGAAGATACTTCT
GTGCTTATGCCAGGATCCATACGTGAAATTTCTGGAGTCAATGCTACGCAGGCAGATATA
GAAATGTCATTTTCAGCTAAAACGTTGGAAAAGGCAGAGAAATGGGAAGCAAATTGGACA
AATCCACAACAAGTGTGTAGCACAAAAGGTGCATCAGTAAAAGGTGGGATTGGGCCATTT
GGGTTACTAGTCTTGGCATCTAAAGACATGCAAGAATATACTGCAATTTTCTTCAGAATT
TTCAGAGGAGATAACAACAATTTTATAGTCCTCATGTGTAGTGACCAGACCAGGTCTTCC
TTACACTTGCCTTCTAGTGATTATGACAAAACAACTTATGGGGCCTTGTTGAATGTGGAT
CCTCTTCAAGAAAAATTGTCTCTCAGGACTTTGATTGATCACTCAATAGTGGAGAGCTTT
GGTGGAGAAGGAAAAGCTTGCATTACAGCTAGGGTTTACCCAACTAATTTAGCAGTGGAT
GGTGCAACCCATTTATATGTCTTCAATAATGGTTCACAGAGTGTTGACATCTCAAAATTG
ACTGCTTGGAGCATGAAAACAGCTCAAATCAATTGA