Plant GARDEN
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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006601
CDS Infomation

pacid=37462993 polypeptide=PGSC0003DMP400004581 locus=PGSC0003DMG400002568 ID=PGSC0003DMT400006601.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCCGTCATCTTCACCAAAATTAACTCAACCATCGAACCCTATAATCGAT
ACTACAAACCAAGTATCCGCCGCCGGAGCTGCATCGTCGGCGACGTCGTCTAATCCCGGA
ATTACGATGACTTCTCCGTCTAACAACAATTCAATCGCACAATCGCCTTCAATTGACCTC
CCTCAAATCCCGTTAACCCAATCTCAGCAACAGCAGCAGCAGCATCAAATTCAGATGCAG
CAGCCTCAACAAATGCAGCAGCAGCAGCAACAGCAATTGACACAATCTCAACAACAGCAG
CAAATGCAGCTCCAGCAGCAGCAGAATAATTCGAGTAATCTTAACGGCAGTAACAGCAAC
TTGATGTCCGCCTCTAATTTTCAGATGCAGCAAAACTTGCAGAGATCACCCTCAATGGCG
AGAATGAGTCAATTGCAAATGCAACAGCAGCAACAACAATTTGGTTTGATGAGGCAGCAA
TCAGGAGGACTTTATGGTCAAATGAATTTTGGGGTTGGAGGTACTTCGCTCCAGCAACAG
CAGCAACAACAATTACAACAGCAGCAACAACAATTGCAGCAACAATTTCAACAACAGCAA
CAGCAGCAGCAACAACAGAACCAACAACAGCAGCAAATAGGTGGTCAGATGGGTAGCGGA
AATTTAGCTAGGACAGCTTTAATGGGACAGACGGGCCATCTGCCCATGTTATCTGGACAA
GCGGCTGTTGCAGCAGCGGCTGTTGCCCAGTTCAATTTGCAATCTCAATTTTTGAATTCG
CCACGGCAGAAGGCGGGTCTAATGCAGGGGAATCAATTCCATACAGGGAATTCCCATGGC
CAGTCCTTACAGGCAATGGGGATGATGGGATCTCTCAACATGAGCTCTCAGCTAAGGGCA
AACGGGGCCCTGGCATATGCACAAAGGATGAGTCAAAGTCAGCTGAGGCAACAGCAGTTG
TCCCAGCAAAATCCTCTCACCACTACTCAGAAAATATCGGCTCAGAGTCTTCCAAGGACG
TCATTTGCTAACTCTCAGTTACCTGGGTTGACTCAGAATGGACAATCTGCAATTATGCAG
AACAATTCATCACAGCAGCAGTGGTTGAAGCCAATTCCTGCGATTTCTACTCCTAATTCC
CCTTCCTTTCGTCTTCAACAGCAAAGGCAGCAAATGCTTCTACAACACCAAAACTCAATG
GGTTTGAACCCACAACAACTATCCCAAATTGTACAACAGCAGCAACAGATTGGGCACCCT
CAGATGCAGCAACTGCAACAGCAGCAGCAACAACAACAGCAGCTTTCACATCAGCAGCAA
TCTTCCCCGAGGATGGCTGCTCCAGCTGGCCAAAAATCTTTGAGTTTAACTGGATCACAA
CCAGATGCTACTGGATCCGGAACAACTACTCCGGGGGGAAGTTCAAGTCAGGGGACTGAA
GCAAGCAATCAGCTTCTTGGAAAGAGAAAGATACAGGATTTGGTTTCACAGGTGGATGCG
CAGGGAAAGCTTGATCCTGAAGTTGAAGATCTTCTTCTAGAGATTGCTGATGACTTCATT
GATTCGGTTACTACATTTGCTTGCAATTTGGCGAAGCATCGGAAATCTTCAACTTTGGAG
TCCAAGGATGTACTGCTACATCTAGAGAAAAACTGGCACTTGACTATTCCAGGCTTCTCA
AGTGAAGAGAGGAAACACTATCCAGAAAATTCATCAAGTGATCTCCACAAAAAGCGTTTG
GATGTGATACGTACCTTGATGGAGACCTCACAAACAGAAACAAGTACAAATAGTAGTGCT
AAGGAAACCGTCAGACCAGGGGCGGGTGAATCAAATCACATGATCAGACCTCCAAGTTCA
GACAACATGGTTTCACAGTCTAATGCTTCTCAAATGTTGCATGAGATGACAAGGTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004581
PEP Infomation

pacid=37462993 transcript=PGSC0003DMT400006601 locus=PGSC0003DMG400002568 ID=PGSC0003DMT400006601.v4.03 annot-version=v4.03
Sequence

MAEIPSSSPKLTQPSNPIIDTTNQVSAAGAASSATSSNPGITMTSPSNNNSIAQSPSIDL
PQIPLTQSQQQQQQHQIQMQQPQQMQQQQQQQLTQSQQQQQMQLQQQQNNSSNLNGSNSN
LMSASNFQMQQNLQRSPSMARMSQLQMQQQQQQFGLMRQQSGGLYGQMNFGVGGTSLQQQ
QQQQLQQQQQQLQQQFQQQQQQQQQQNQQQQQIGGQMGSGNLARTALMGQTGHLPMLSGQ
AAVAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAMGMMGSLNMSSQLRA
NGALAYAQRMSQSQLRQQQLSQQNPLTTTQKISAQSLPRTSFANSQLPGLTQNGQSAIMQ
NNSSQQQWLKPIPAISTPNSPSFRLQQQRQQMLLQHQNSMGLNPQQLSQIVQQQQQIGHP
QMQQLQQQQQQQQQLSHQQQSSPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTE
ASNQLLGKRKIQDLVSQVDAQGKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLE
SKDVLLHLEKNWHLTIPGFSSEERKHYPENSSSDLHKKRLDVIRTLMETSQTETSTNSSA
KETVRPGAGESNHMIRPPSSDNMVSQSNASQMLHEMTRF*

Transcript Sequence

Transcript ID

PGSC0003DMT400006601
Transcript Infomation

pacid=37462993 locus=PGSC0003DMG400002568 ID=PGSC0003DMT400006601.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCCGTCATCTTCACCAAAATTAACTCAACCATCGAACCCTATAATCGAT
ACTACAAACCAAGTATCCGCCGCCGGAGCTGCATCGTCGGCGACGTCGTCTAATCCCGGA
ATTACGATGACTTCTCCGTCTAACAACAATTCAATCGCACAATCGCCTTCAATTGACCTC
CCTCAAATCCCGTTAACCCAATCTCAGCAACAGCAGCAGCAGCATCAAATTCAGATGCAG
CAGCCTCAACAAATGCAGCAGCAGCAGCAACAGCAATTGACACAATCTCAACAACAGCAG
CAAATGCAGCTCCAGCAGCAGCAGAATAATTCGAGTAATCTTAACGGCAGTAACAGCAAC
TTGATGTCCGCCTCTAATTTTCAGATGCAGCAAAACTTGCAGAGATCACCCTCAATGGCG
AGAATGAGTCAATTGCAAATGCAACAGCAGCAACAACAATTTGGTTTGATGAGGCAGCAA
TCAGGAGGACTTTATGGTCAAATGAATTTTGGGGTTGGAGGTACTTCGCTCCAGCAACAG
CAGCAACAACAATTACAACAGCAGCAACAACAATTGCAGCAACAATTTCAACAACAGCAA
CAGCAGCAGCAACAACAGAACCAACAACAGCAGCAAATAGGTGGTCAGATGGGTAGCGGA
AATTTAGCTAGGACAGCTTTAATGGGACAGACGGGCCATCTGCCCATGTTATCTGGACAA
GCGGCTGTTGCAGCAGCGGCTGTTGCCCAGTTCAATTTGCAATCTCAATTTTTGAATTCG
CCACGGCAGAAGGCGGGTCTAATGCAGGGGAATCAATTCCATACAGGGAATTCCCATGGC
CAGTCCTTACAGGCAATGGGGATGATGGGATCTCTCAACATGAGCTCTCAGCTAAGGGCA
AACGGGGCCCTGGCATATGCACAAAGGATGAGTCAAAGTCAGCTGAGGCAACAGCAGTTG
TCCCAGCAAAATCCTCTCACCACTACTCAGAAAATATCGGCTCAGAGTCTTCCAAGGACG
TCATTTGCTAACTCTCAGTTACCTGGGTTGACTCAGAATGGACAATCTGCAATTATGCAG
AACAATTCATCACAGCAGCAGTGGTTGAAGCCAATTCCTGCGATTTCTACTCCTAATTCC
CCTTCCTTTCGTCTTCAACAGCAAAGGCAGCAAATGCTTCTACAACACCAAAACTCAATG
GGTTTGAACCCACAACAACTATCCCAAATTGTACAACAGCAGCAACAGATTGGGCACCCT
CAGATGCAGCAACTGCAACAGCAGCAGCAACAACAACAGCAGCTTTCACATCAGCAGCAA
TCTTCCCCGAGGATGGCTGCTCCAGCTGGCCAAAAATCTTTGAGTTTAACTGGATCACAA
CCAGATGCTACTGGATCCGGAACAACTACTCCGGGGGGAAGTTCAAGTCAGGGGACTGAA
GCAAGCAATCAGCTTCTTGGAAAGAGAAAGATACAGGATTTGGTTTCACAGGTGGATGCG
CAGGGAAAGCTTGATCCTGAAGTTGAAGATCTTCTTCTAGAGATTGCTGATGACTTCATT
GATTCGGTTACTACATTTGCTTGCAATTTGGCGAAGCATCGGAAATCTTCAACTTTGGAG
TCCAAGGATGTACTGCTACATCTAGAGAAAAACTGGCACTTGACTATTCCAGGCTTCTCA
AGTGAAGAGAGGAAACACTATCCAGAAAATTCATCAAGTGATCTCCACAAAAAGCGTTTG
GATGTGATACGTACCTTGATGGAGACCTCACAAACAGAAACAAGTACAAATAGTAGTGCT
AAGGAAACCGTCAGACCAGGGGCGGGTGAATCAAATCACATGATCAGACCTCCAAGTTCA
GACAACATGGTTTCACAGTCTAATGCTTCTCAAATGTTGCATGAGATGACAAGGTTTTGA