Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006582
CDS Infomation

pacid=37462323 polypeptide=PGSC0003DMP400004567 locus=PGSC0003DMG400002560 ID=PGSC0003DMT400006582.v4.03 annot-version=v4.03
Sequence

ATGGTGAACGAAGCTCTTATCTCCGATCCGGTGGATCCTCTCCATAGCCTTGCCGGACTT
TCTCTACTCCCAACAACAGTTAGGGTTTCCACCGACGCCTCTGTATCAGTAAACCCCAAA
GACCTAGAGTCAATTCACAATTTCATGAAGTCCATGGAAACCAAGAGTCCTGGGCTCTTG
GAGGAGGCAAGGGAAATTGTGGATAATGGTGCGGAGCTTTTGAATACCAAGTTTACGAGT
TTTATACTATCTAAAGGCATTGATGGGGATCTTGCAATGAAGGGAAAGGAGAAGCTCCAG
GAGAGAAGACCAGGACTGGGGCGTAAAAGGGCTCGATTTTCTCTCAAGCCTAGTACAAGT
CAACCTACTGTCAGCGTAGCTCCTCGTTTAGATATTGATCAACTGTCAGATCCAGTGGAA
TTTTTCTCAGTTGCTGAAAAGCTAGAAGATGCTGAGAAGGAAATAGAAAGACAGAAAGGT
AGCAGTATCCATGATCCAGATGTGAATAATCCACCCGCCAATGCACGGCGTCGTCGACCA
GGCATCTTGGGCAAATCGGTGAAGTATAAGCACCGTTTCTCATCCACCCAGCCTGAGAAT
GATGATGCATTTATATCATCTCAAGAGACATTGGAAGATGATATTCTGGTGGAACATGGT
TCTCAGTTGCCAGAAGAGCTTCATGGCCTCAATGTTGAACTACAAGAAGCAGAACTCACA
GGGTCAATAAAGAAAACAGAAAACAGAATAAACAAGATTCTGGGTGAATTACTGTCCTGT
AGTGATGAAGATCTAGACCGGGACATGGCAGTATCCAAATTGCAAGAGCGGTTGCAGATC
AAGCCCATTGAACTAGGCACTTTATGTATTCCCGAGTTCCCTGTGACTGGAAAGCTTGAT
GGTAAGGCTTTTGGAGAGAGGATTCAGAAGCCTAGGAAGTTTTCATTGGAGGTACGGGAG
TTGGTTAAAAGTGCAACCGAGGGAACACCTTCCTCTCACAAACAGCATGAGGAAAGTCCT
GCCAGTAAATTAGCATCACCCACTCCACCAAAAAGTCCATTTGGTTCATTGTCTTTGTTG
AAAAAGAAACTTATGCAGTCAAATCCACTGAGAGATCCTTTTTCGCCTCTCAACATTGAT
CTGCAATCAGAGCATCCAGATTGGTCCGTGAAGAAGAAATCACAATGTGTAAATAATAAT
GTTGGACCTACTGAATCTCGTGGTTGTGAAAATACGAATATTATGGTCCCTTTAAGAGGT
TCAGACTTAGTGCATGAGCAACTGATGGAAAAGAATCCAGGCAGAGATAGTGTAAGAACT
GGGCCAAATGAATCTCGATCTGGTATGGAGCAACATAATGGTTATGATGATATTGATGTC
AATACTAACGTCAACTTAAATATGAGAAATGTGGATTCCCGCCATGAGTCTGATGGGCTT
GACAAAGTGAAAGATGATTCAGCTATAAACAATGTTTTGAAGGATCTACAAAGTCTTGAG
ACCAAATCCTACATTAACTGTCAAAAGCTGCAGGATAGCGAAGTTCTTGCTGAAACACTA
CCTTCTCTTCAAGCCCAAGGAAAAGCTGTCGATACAGCCAATTATACCATTGAAACAGTT
GTTGAGGATTTTGGATCAACTGAAATTGATCAGCTGGTGGACAATATGCTACCAGAAACA
GCGCCTTCTGTAGAACAAGATCATTACTTTGAGGATTCTGTCAAAGACTTAAATAGTGAT
CAATTGAACTCAGTTGCAGTTGAAGTTCCTTCTAGAGACGTGAGATCTAAATTTCCTGAG
ATGAGCCCTCAGCATCACACCCAGACAAAAGATAAGCAACAGAAAGCAAAGAAACTTGCT
GTTGGAAGGCGTGAAAGAAAACATCTTTCTTCTAGGCCAAGTCTAGCAGATGCTGGTACA
TCATTTGAAAGTGGGGTTAGACGAAGCAAACGAATGAAGACAAGACCTTTGGAATATTGG
AAAGGCGAAAGATTATTATATGGACGGGTTGATGAGGGTTTGAAGCTTGTTGGCTTGAAA
TACATCTCTCCAGGAAAGGGATCATTTAAGGTGAAGTCTTACATCCCTGATGACTACAAA
GACCTAGTTGATTTAGCAGCTCGCTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004567
PEP Infomation

pacid=37462323 transcript=PGSC0003DMT400006582 locus=PGSC0003DMG400002560 ID=PGSC0003DMT400006582.v4.03 annot-version=v4.03
Sequence

MVNEALISDPVDPLHSLAGLSLLPTTVRVSTDASVSVNPKDLESIHNFMKSMETKSPGLL
EEAREIVDNGAELLNTKFTSFILSKGIDGDLAMKGKEKLQERRPGLGRKRARFSLKPSTS
QPTVSVAPRLDIDQLSDPVEFFSVAEKLEDAEKEIERQKGSSIHDPDVNNPPANARRRRP
GILGKSVKYKHRFSSTQPENDDAFISSQETLEDDILVEHGSQLPEELHGLNVELQEAELT
GSIKKTENRINKILGELLSCSDEDLDRDMAVSKLQERLQIKPIELGTLCIPEFPVTGKLD
GKAFGERIQKPRKFSLEVRELVKSATEGTPSSHKQHEESPASKLASPTPPKSPFGSLSLL
KKKLMQSNPLRDPFSPLNIDLQSEHPDWSVKKKSQCVNNNVGPTESRGCENTNIMVPLRG
SDLVHEQLMEKNPGRDSVRTGPNESRSGMEQHNGYDDIDVNTNVNLNMRNVDSRHESDGL
DKVKDDSAINNVLKDLQSLETKSYINCQKLQDSEVLAETLPSLQAQGKAVDTANYTIETV
VEDFGSTEIDQLVDNMLPETAPSVEQDHYFEDSVKDLNSDQLNSVAVEVPSRDVRSKFPE
MSPQHHTQTKDKQQKAKKLAVGRRERKHLSSRPSLADAGTSFESGVRRSKRMKTRPLEYW
KGERLLYGRVDEGLKLVGLKYISPGKGSFKVKSYIPDDYKDLVDLAARY*

Transcript Sequence

Transcript ID

PGSC0003DMT400006582
Transcript Infomation

pacid=37462323 locus=PGSC0003DMG400002560 ID=PGSC0003DMT400006582.v4.03 annot-version=v4.03
Sequence

ATGGTGAACGAAGCTCTTATCTCCGATCCGGTGGATCCTCTCCATAGCCTTGCCGGACTT
TCTCTACTCCCAACAACAGTTAGGGTTTCCACCGACGCCTCTGTATCAGTAAACCCCAAA
GACCTAGAGTCAATTCACAATTTCATGAAGTCCATGGAAACCAAGAGTCCTGGGCTCTTG
GAGGAGGCAAGGGAAATTGTGGATAATGGTGCGGAGCTTTTGAATACCAAGTTTACGAGT
TTTATACTATCTAAAGGCATTGATGGGGATCTTGCAATGAAGGGAAAGGAGAAGCTCCAG
GAGAGAAGACCAGGACTGGGGCGTAAAAGGGCTCGATTTTCTCTCAAGCCTAGTACAAGT
CAACCTACTGTCAGCGTAGCTCCTCGTTTAGATATTGATCAACTGTCAGATCCAGTGGAA
TTTTTCTCAGTTGCTGAAAAGCTAGAAGATGCTGAGAAGGAAATAGAAAGACAGAAAGGT
AGCAGTATCCATGATCCAGATGTGAATAATCCACCCGCCAATGCACGGCGTCGTCGACCA
GGCATCTTGGGCAAATCGGTGAAGTATAAGCACCGTTTCTCATCCACCCAGCCTGAGAAT
GATGATGCATTTATATCATCTCAAGAGACATTGGAAGATGATATTCTGGTGGAACATGGT
TCTCAGTTGCCAGAAGAGCTTCATGGCCTCAATGTTGAACTACAAGAAGCAGAACTCACA
GGGTCAATAAAGAAAACAGAAAACAGAATAAACAAGATTCTGGGTGAATTACTGTCCTGT
AGTGATGAAGATCTAGACCGGGACATGGCAGTATCCAAATTGCAAGAGCGGTTGCAGATC
AAGCCCATTGAACTAGGCACTTTATGTATTCCCGAGTTCCCTGTGACTGGAAAGCTTGAT
GGTAAGGCTTTTGGAGAGAGGATTCAGAAGCCTAGGAAGTTTTCATTGGAGGTACGGGAG
TTGGTTAAAAGTGCAACCGAGGGAACACCTTCCTCTCACAAACAGCATGAGGAAAGTCCT
GCCAGTAAATTAGCATCACCCACTCCACCAAAAAGTCCATTTGGTTCATTGTCTTTGTTG
AAAAAGAAACTTATGCAGTCAAATCCACTGAGAGATCCTTTTTCGCCTCTCAACATTGAT
CTGCAATCAGAGCATCCAGATTGGTCCGTGAAGAAGAAATCACAATGTGTAAATAATAAT
GTTGGACCTACTGAATCTCGTGGTTGTGAAAATACGAATATTATGGTCCCTTTAAGAGGT
TCAGACTTAGTGCATGAGCAACTGATGGAAAAGAATCCAGGCAGAGATAGTGTAAGAACT
GGGCCAAATGAATCTCGATCTGGTATGGAGCAACATAATGGTTATGATGATATTGATGTC
AATACTAACGTCAACTTAAATATGAGAAATGTGGATTCCCGCCATGAGTCTGATGGGCTT
GACAAAGTGAAAGATGATTCAGCTATAAACAATGTTTTGAAGGATCTACAAAGTCTTGAG
ACCAAATCCTACATTAACTGTCAAAAGCTGCAGGATAGCGAAGTTCTTGCTGAAACACTA
CCTTCTCTTCAAGCCCAAGGAAAAGCTGTCGATACAGCCAATTATACCATTGAAACAGTT
GTTGAGGATTTTGGATCAACTGAAATTGATCAGCTGGTGGACAATATGCTACCAGAAACA
GCGCCTTCTGTAGAACAAGATCATTACTTTGAGGATTCTGTCAAAGACTTAAATAGTGAT
CAATTGAACTCAGTTGCAGTTGAAGTTCCTTCTAGAGACGTGAGATCTAAATTTCCTGAG
ATGAGCCCTCAGCATCACACCCAGACAAAAGATAAGCAACAGAAAGCAAAGAAACTTGCT
GTTGGAAGGCGTGAAAGAAAACATCTTTCTTCTAGGCCAAGTCTAGCAGATGCTGGTACA
TCATTTGAAAGTGGGGTTAGACGAAGCAAACGAATGAAGACAAGACCTTTGGAATATTGG
AAAGGCGAAAGATTATTATATGGACGGGTTGATGAGGGTTTGAAGCTTGTTGGCTTGAAA
TACATCTCTCCAGGAAAGGGATCATTTAAGGTGAAGTCTTACATCCCTGATGACTACAAA
GACCTAGTTGATTTAGCAGCTCGCTATTGA