Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006531
CDS Infomation

pacid=37461659 polypeptide=PGSC0003DMP400004524 locus=PGSC0003DMG400002546 ID=PGSC0003DMT400006531.v4.03 annot-version=v4.03
Sequence

ATGGTTCGAGCAGTAGAGGAAGAGAAATTAGAGGTTCCTGCTGTTGAATCTCAAAATATT
AATGGGTGGAAACTTACCCGTAAAGAGACCATCAAGGCACGTAATATTAATAAAGCAGAC
GATTCAGCCTCTGCTATCGTCAAAGAGAACAGCCCGCCTTCAGATATGGACATGATGAAG
GAAAAATTTGCCAAGTTGCTCCTTGGTGAGGATATGTCTGGCGGAGGAAAGGGTGTTTCA
TCAGCATTGGCGCTGTCAAATGCAATTACAAACCTTGCAGCTTCGGCGTTTGGGGAACAG
AAGAGATTAGAACCCATGCAACTAGAGACAAAAGCCAAGTGGAGAAAAGAAATTGATTGG
CTTTTATCTGTTACAGATTATATTGTTGAATTTGTTGCTTCTAAACAAAAATCAAAAGAC
GGAACAATTATGGAGATTATGGTGACAAAGCAGAGAACTGATCTTCAAATGAACATTCCA
GCATTGCGTAAGCTAGATACAATGCTTCTGGATTGTTTAGATAGTTTTAAAGACCAAACT
GAAATCTGTTATACATCCAAAGATGATGAAGGTAAAACCGCCAGGAAAGATGATAAATGG
TGGATACCTACCCCTAAGGTTCCTCCTAATGGTTTGTCGGATACTACTAGGAAATGGCTG
CAATTTCAGAAAGATTCAGTGAACCAAGTTCATAAAGCAGCCCTCGCCATAAATGCTCAA
GTTCTTACAGAGATGGAGGTTCCTGAAAATTATATAGAATCCTTACCCAAGAATGGGAGA
GCGAGCCTTGGAGACTCAATATACAGGAGCATCACGGATGAATACTTTGATCCGGACTAC
TTCCTTTCAACTATGGACTTGTCCTCCGAACATAAAATTCTAGACCTCAAGAACAGGATT
GAGGCTTCTGTAATTATTTGGAGAAGAAAGATGACTGCAAAAGATGGGAAGTCAGCCTGG
AGTTCAGCCGTTAGTATGGAGAAAAGAGAATTATTTGAAGACAGAGCAGAAACTATCCTT
CTTATTCTTAAGCATCGGTTCCCTGGAATTCCTCAATCATCACTAGACATAAGCAAAATT
CAGTACAACAGAGATATCGGGCAAGCCATTTTAGAAAGCTATTCAAGAATAATTGAAAGC
AGGGCATTCACAGTCATGTCGCGAATTGAAGATGTAATGCAGGCAGATGATCTGGCCCAT
GATCCTTCAAATGGAGAAGTAAAGAGGTTTCCAATGGGAGATTCGTTGGGAGTATCAGAT
GGAACATTTAATGATAAGGAAGAAGTAGAGAAGCTTAGCTCTGCAGAAACACCAAATTCA
ATGACACTACTGGATTTCATGGGTTGGGGAGAAGGAGATGAAGACACGGAGAAAGATACG
AAGGAAGAAATCCGATCAAAAGAGAGTGATGCAAAGCTTCTAAGCAAACCTCCAAATATA
GTTACTAACAAGAGAGTTTCTTACCTAGAGAATTTGACTGGTTCCAGAAGTCCAACAGCA
CGCCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004524
PEP Infomation

pacid=37461659 transcript=PGSC0003DMT400006531 locus=PGSC0003DMG400002546 ID=PGSC0003DMT400006531.v4.03 annot-version=v4.03
Sequence

MVRAVEEEKLEVPAVESQNINGWKLTRKETIKARNINKADDSASAIVKENSPPSDMDMMK
EKFAKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQKRLEPMQLETKAKWRKEIDW
LLSVTDYIVEFVASKQKSKDGTIMEIMVTKQRTDLQMNIPALRKLDTMLLDCLDSFKDQT
EICYTSKDDEGKTARKDDKWWIPTPKVPPNGLSDTTRKWLQFQKDSVNQVHKAALAINAQ
VLTEMEVPENYIESLPKNGRASLGDSIYRSITDEYFDPDYFLSTMDLSSEHKILDLKNRI
EASVIIWRRKMTAKDGKSAWSSAVSMEKRELFEDRAETILLILKHRFPGIPQSSLDISKI
QYNRDIGQAILESYSRIIESRAFTVMSRIEDVMQADDLAHDPSNGEVKRFPMGDSLGVSD
GTFNDKEEVEKLSSAETPNSMTLLDFMGWGEGDEDTEKDTKEEIRSKESDAKLLSKPPNI
VTNKRVSYLENLTGSRSPTARH*

Transcript Sequence

Transcript ID

PGSC0003DMT400006531
Transcript Infomation

pacid=37461659 locus=PGSC0003DMG400002546 ID=PGSC0003DMT400006531.v4.03 annot-version=v4.03
Sequence

ATGGTTCGAGCAGTAGAGGAAGAGAAATTAGAGGTTCCTGCTGTTGAATCTCAAAATATT
AATGGGTGGAAACTTACCCGTAAAGAGACCATCAAGGCACGTAATATTAATAAAGCAGAC
GATTCAGCCTCTGCTATCGTCAAAGAGAACAGCCCGCCTTCAGATATGGACATGATGAAG
GAAAAATTTGCCAAGTTGCTCCTTGGTGAGGATATGTCTGGCGGAGGAAAGGGTGTTTCA
TCAGCATTGGCGCTGTCAAATGCAATTACAAACCTTGCAGCTTCGGCGTTTGGGGAACAG
AAGAGATTAGAACCCATGCAACTAGAGACAAAAGCCAAGTGGAGAAAAGAAATTGATTGG
CTTTTATCTGTTACAGATTATATTGTTGAATTTGTTGCTTCTAAACAAAAATCAAAAGAC
GGAACAATTATGGAGATTATGGTGACAAAGCAGAGAACTGATCTTCAAATGAACATTCCA
GCATTGCGTAAGCTAGATACAATGCTTCTGGATTGTTTAGATAGTTTTAAAGACCAAACT
GAAATCTGTTATACATCCAAAGATGATGAAGGTAAAACCGCCAGGAAAGATGATAAATGG
TGGATACCTACCCCTAAGGTTCCTCCTAATGGTTTGTCGGATACTACTAGGAAATGGCTG
CAATTTCAGAAAGATTCAGTGAACCAAGTTCATAAAGCAGCCCTCGCCATAAATGCTCAA
GTTCTTACAGAGATGGAGGTTCCTGAAAATTATATAGAATCCTTACCCAAGAATGGGAGA
GCGAGCCTTGGAGACTCAATATACAGGAGCATCACGGATGAATACTTTGATCCGGACTAC
TTCCTTTCAACTATGGACTTGTCCTCCGAACATAAAATTCTAGACCTCAAGAACAGGATT
GAGGCTTCTGTAATTATTTGGAGAAGAAAGATGACTGCAAAAGATGGGAAGTCAGCCTGG
AGTTCAGCCGTTAGTATGGAGAAAAGAGAATTATTTGAAGACAGAGCAGAAACTATCCTT
CTTATTCTTAAGCATCGGTTCCCTGGAATTCCTCAATCATCACTAGACATAAGCAAAATT
CAGTACAACAGAGATATCGGGCAAGCCATTTTAGAAAGCTATTCAAGAATAATTGAAAGC
AGGGCATTCACAGTCATGTCGCGAATTGAAGATGTAATGCAGGCAGATGATCTGGCCCAT
GATCCTTCAAATGGAGAAGTAAAGAGGTTTCCAATGGGAGATTCGTTGGGAGTATCAGAT
GGAACATTTAATGATAAGGAAGAAGTAGAGAAGCTTAGCTCTGCAGAAACACCAAATTCA
ATGACACTACTGGATTTCATGGGTTGGGGAGAAGGAGATGAAGACACGGAGAAAGATACG
AAGGAAGAAATCCGATCAAAAGAGAGTGATGCAAAGCTTCTAAGCAAACCTCCAAATATA
GTTACTAACAAGAGAGTTTCTTACCTAGAGAATTTGACTGGTTCCAGAAGTCCAACAGCA
CGCCACTAA