Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006508
CDS Infomation

pacid=37461819 polypeptide=PGSC0003DMP400004504 locus=PGSC0003DMG400002539 ID=PGSC0003DMT400006508.v4.03 annot-version=v4.03
Sequence

ATGAATGCAGTTGGCAGGCAAAGATCTGGAACATCGACGGGGCATCACCAGAGGCAATAC
TCTGATAACTTCCTGGAGACTTCATCTAATGGAAGATGGCTTCAATCAGCTGGTCTTCAG
CATCTTCAAACTTCAAATAATAATGTTCCTCAGGCTCCACAGGGACAGGAATATGGATAC
TATGGTGGAGCTCAAGGGTCGAGAATGCTTAGAGGTGCACAGAGGACATATAGTGGAGGA
AGCGATCTCTTTGCGGAGCCTTTGACGCCGCCGGGAAATCATCGACAGTCAAGCCAGAGA
AGGAATGGTGACGAAGAAGTCTATCCCAATGAGTTCAGTCCTGGACTCTTAGATCTACAC
TCATTGGATACTGAGCTTTTACCAGAGATGCCTGTTGCTGGTTTGTATGATGCTCCTTCC
ATGCATCACTTTGCTCGAGCAAAAAGCTTTGATGACTCGGAGCAATTCCTTGCAAACAAC
AAGCAAACTGGTAGAGTTCGGGGATTGCCAGAGAGTAATGTCTCTAAGAGTTTTGCTGTT
GATAAAGACAAGGCCAGCAATGTCGCAAAGATCAAAGTGGTGGTGCGTAAGCGACCACTA
AACAAAAAGGAATTAACGAAGAATGAAGAAGACATCGTTGAAACACGTTTCAACTCTCTA
GTAGTCCATGAAACTAAACTAAAGGTTGATCTGACTCAATATGTTGAGAAGCATGAGTTT
GTCTTTGATGCTGTGCTAAATGAGGAGGTTTCGAATGATGAGGTATACCATGAAACAGTG
GAGCCCATTGTCCCAATAATTTTCCAACGCACAAAAGCTACTTGCTTTGCGTATGGGCAA
ACAGGAAGTGGCAAAACGTATACCATGAAACCACTACCTCTGAGGGCATCTAGGGATCTT
TTGAGGCTCATTCATCATACATACCGGAACCAGGGTTTTCAATTGTTTTTCAGTTTTTTT
GAGATATATGGTGGAAAGCTCTATGACTTGCTTAATGATCGGAAGAAACTTTGCATGAGA
GAGGATGGTAAACAACAAGTATGTATAGTTGGATTGCAAGAATACAGGGTCTCTGATGTG
GAGATGATTAAGGAGCTCATTGACAGAGGAAATGCAACTAGAAGTACTGGCACCACTGGT
GCCAATGAGGAATCATCTAGGTCACATGCTATTCTCCAGCTTTCTGTTAAGAGGTCAGCT
GACGGTAGCGAATCTAAACCTCCCCGTGTTATTGGGAAGCTCTCCTTCATAGACCTTGCA
GGAAGTGAACGTGGTGCAGACACAACTGATAATGATAAGCAAACCAGAATTGAAGGAGCA
GAGATTAATAAAAGTTTGCTGGCACTAAAGGAATGCATTAGAGCCCTTGACAATGATCAA
AACCATATTCCTTTTAGAGGCAGTAAATTAACTGAAGTGCTGAGGGACTCTTTTGTTGGA
AATAGTCGTACTGTTATGATATCTTGCATTTCCCCAAATGCAGGATCTTGTGAGCATACT
TTAAATACATTAAGATATGCTGACAGGGTGAAGAGTCTTTCAAAAGGGAACAACTCAAAG
AAGGACGTCTCATCCTCAACATTGAATCTGAAGGAGTCGACAACATTATCTTTTTCTGCA
GTTGTACCTTCTACATCAACATTTGAAGATGATACCGGTGATTCATGGCCTGAACAAATT
GACAAAGATGAATATGATGAAGATTTCTATGTACAAGAGAAGCCAATGTGGAAGAAGAAT
GAGAAGCTTGATGGTTACACTATCTCCAATTCAGAAGATAAAATGAAGAGAGCAAATGCT
CAGACAAAGTGGAAGGAGCCACCTAGAACAGAGGCAAAGTATTCAAACTCGGATGATGAT
CTGAATGCTCTCCTAAAGGATGAGGAAGATCTTGTGAATGCGCATCGGAAACAAGTGGAG
GAAACAATGGACATTGTTCGAGAGGAGATGAATCTATTAGTTGAGGCAGATCAACCAGGG
AACCAGCTGGACAATTATATTTCTCGATTAAATGCAATCCTTTCACAAAAGGCTGCTGGC
ATCCTAGAGTTGCAGAACCAGTTAGCTCATTTTCAAAAACGTCTAAAGGAGCACAATGTT
CTTGTATCTTCTGGCAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004504
PEP Infomation

pacid=37461819 transcript=PGSC0003DMT400006508 locus=PGSC0003DMG400002539 ID=PGSC0003DMT400006508.v4.03 annot-version=v4.03
Sequence

MNAVGRQRSGTSTGHHQRQYSDNFLETSSNGRWLQSAGLQHLQTSNNNVPQAPQGQEYGY
YGGAQGSRMLRGAQRTYSGGSDLFAEPLTPPGNHRQSSQRRNGDEEVYPNEFSPGLLDLH
SLDTELLPEMPVAGLYDAPSMHHFARAKSFDDSEQFLANNKQTGRVRGLPESNVSKSFAV
DKDKASNVAKIKVVVRKRPLNKKELTKNEEDIVETRFNSLVVHETKLKVDLTQYVEKHEF
VFDAVLNEEVSNDEVYHETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLRASRDL
LRLIHHTYRNQGFQLFFSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDV
EMIKELIDRGNATRSTGTTGANEESSRSHAILQLSVKRSADGSESKPPRVIGKLSFIDLA
GSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQNHIPFRGSKLTEVLRDSFVG
NSRTVMISCISPNAGSCEHTLNTLRYADRVKSLSKGNNSKKDVSSSTLNLKESTTLSFSA
VVPSTSTFEDDTGDSWPEQIDKDEYDEDFYVQEKPMWKKNEKLDGYTISNSEDKMKRANA
QTKWKEPPRTEAKYSNSDDDLNALLKDEEDLVNAHRKQVEETMDIVREEMNLLVEADQPG
NQLDNYISRLNAILSQKAAGILELQNQLAHFQKRLKEHNVLVSSGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400006508
Transcript Infomation

pacid=37461819 locus=PGSC0003DMG400002539 ID=PGSC0003DMT400006508.v4.03 annot-version=v4.03
Sequence

ATGAATGCAGTTGGCAGGCAAAGATCTGGAACATCGACGGGGCATCACCAGAGGCAATAC
TCTGATAACTTCCTGGAGACTTCATCTAATGGAAGATGGCTTCAATCAGCTGGTCTTCAG
CATCTTCAAACTTCAAATAATAATGTTCCTCAGGCTCCACAGGGACAGGAATATGGATAC
TATGGTGGAGCTCAAGGGTCGAGAATGCTTAGAGGTGCACAGAGGACATATAGTGGAGGA
AGCGATCTCTTTGCGGAGCCTTTGACGCCGCCGGGAAATCATCGACAGTCAAGCCAGAGA
AGGAATGGTGACGAAGAAGTCTATCCCAATGAGTTCAGTCCTGGACTCTTAGATCTACAC
TCATTGGATACTGAGCTTTTACCAGAGATGCCTGTTGCTGGTTTGTATGATGCTCCTTCC
ATGCATCACTTTGCTCGAGCAAAAAGCTTTGATGACTCGGAGCAATTCCTTGCAAACAAC
AAGCAAACTGGTAGAGTTCGGGGATTGCCAGAGAGTAATGTCTCTAAGAGTTTTGCTGTT
GATAAAGACAAGGCCAGCAATGTCGCAAAGATCAAAGTGGTGGTGCGTAAGCGACCACTA
AACAAAAAGGAATTAACGAAGAATGAAGAAGACATCGTTGAAACACGTTTCAACTCTCTA
GTAGTCCATGAAACTAAACTAAAGGTTGATCTGACTCAATATGTTGAGAAGCATGAGTTT
GTCTTTGATGCTGTGCTAAATGAGGAGGTTTCGAATGATGAGGTATACCATGAAACAGTG
GAGCCCATTGTCCCAATAATTTTCCAACGCACAAAAGCTACTTGCTTTGCGTATGGGCAA
ACAGGAAGTGGCAAAACGTATACCATGAAACCACTACCTCTGAGGGCATCTAGGGATCTT
TTGAGGCTCATTCATCATACATACCGGAACCAGGGTTTTCAATTGTTTTTCAGTTTTTTT
GAGATATATGGTGGAAAGCTCTATGACTTGCTTAATGATCGGAAGAAACTTTGCATGAGA
GAGGATGGTAAACAACAAGTATGTATAGTTGGATTGCAAGAATACAGGGTCTCTGATGTG
GAGATGATTAAGGAGCTCATTGACAGAGGAAATGCAACTAGAAGTACTGGCACCACTGGT
GCCAATGAGGAATCATCTAGGTCACATGCTATTCTCCAGCTTTCTGTTAAGAGGTCAGCT
GACGGTAGCGAATCTAAACCTCCCCGTGTTATTGGGAAGCTCTCCTTCATAGACCTTGCA
GGAAGTGAACGTGGTGCAGACACAACTGATAATGATAAGCAAACCAGAATTGAAGGAGCA
GAGATTAATAAAAGTTTGCTGGCACTAAAGGAATGCATTAGAGCCCTTGACAATGATCAA
AACCATATTCCTTTTAGAGGCAGTAAATTAACTGAAGTGCTGAGGGACTCTTTTGTTGGA
AATAGTCGTACTGTTATGATATCTTGCATTTCCCCAAATGCAGGATCTTGTGAGCATACT
TTAAATACATTAAGATATGCTGACAGGGTGAAGAGTCTTTCAAAAGGGAACAACTCAAAG
AAGGACGTCTCATCCTCAACATTGAATCTGAAGGAGTCGACAACATTATCTTTTTCTGCA
GTTGTACCTTCTACATCAACATTTGAAGATGATACCGGTGATTCATGGCCTGAACAAATT
GACAAAGATGAATATGATGAAGATTTCTATGTACAAGAGAAGCCAATGTGGAAGAAGAAT
GAGAAGCTTGATGGTTACACTATCTCCAATTCAGAAGATAAAATGAAGAGAGCAAATGCT
CAGACAAAGTGGAAGGAGCCACCTAGAACAGAGGCAAAGTATTCAAACTCGGATGATGAT
CTGAATGCTCTCCTAAAGGATGAGGAAGATCTTGTGAATGCGCATCGGAAACAAGTGGAG
GAAACAATGGACATTGTTCGAGAGGAGATGAATCTATTAGTTGAGGCAGATCAACCAGGG
AACCAGCTGGACAATTATATTTCTCGATTAAATGCAATCCTTTCACAAAAGGCTGCTGGC
ATCCTAGAGTTGCAGAACCAGTTAGCTCATTTTCAAAAACGTCTAAAGGAGCACAATGTT
CTTGTATCTTCTGGCAACTGA