Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006501
CDS Infomation

pacid=37458844 polypeptide=PGSC0003DMP400004499 locus=PGSC0003DMG400002537 ID=PGSC0003DMT400006501.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTACGTTTACCTCAGTGTGTTCAATTGCTTCCACAAACCAGACAGTTGATAAA
AAATTCATCAATTCTTCTGAAACGTTATCTTCATTCTCTGGGATATCTTTGACTTCATTA
GGGGGCAGGAGAAAGAATAAAGTTTTAAAGAAGAGAAATGATTCCAAGATCCAGGCTATG
GCCAAGAAGTTACACTTCAATCAGGATGGTTCTGCCATCAAGAAGTTGCAAGCAGGTGTT
AACAAGCTTGCAGATCTAGTAGGTGTAACTCTTGGTCCAAAAGGAAGAAATGTAGTTCTT
GAGAGCAAATATGGATCTCCGAAAATTGTAAATGATGGTGTTACTGTGGCCAGAGAGGTT
GAACTAGAAGACCCTGTTGAGAATATTGGCGCAAGTTTGGTGAGACAAGCTGCATCAAAG
ACAAATGACTTGGCTGGGGATGGAACAACTACATCCGTTGTTTTGGCACAGGGGCTCATA
ACTGAGGGTGTTAAGGTTGTTGCAGCTGGTGCAAACCCTATTCAGATTGCCAAGGGCATC
GACAGGACCACCAAAGCCCTGGTTTCTGAGCTAAAAAATATGTCAAAAGAGGTCGAGGAC
AGTGAACTAGCAGATGTAGCTGCGGTTAGTGCAGGAAACAACTATGAAGTAGGAAATATG
ATAGCAGAAGCCTTGAGTAAAGTGGGTAGGAAAGGTGTAGTGACTCTTGAGGAAGGACGG
GGTTCTGAGAACAACTTATTTGTTGTGGAAGGCATGCAATTTGACCGTGGCTATATCTCT
CCATACTTTGTTACAGACAATGAGAAGATGGTAGCTGAATATGAAAACTGCAAGCTGCTT
TTGGTAGACAAAAAGATAACAAATGCAAGGGATTTAGTCAATGTTTTGGAAGAAGCAATC
AAGAACGGATACCCAATATTGGTAATCGCTGAAGACATAGAGCAGGAAGCTCTAGCCACA
CTGGTTGTGAACAAATTAAGAGGAGCATTGAAAATTGCTGCTCTTAAAGCTCCTGGTTTT
GGAGATCGAAAAAGCCAATATCTTGATGACATTGCTATCCTTACTGGAGGTACTGTCATT
CGAGAGGAGGTTGGTTTATACCTAGACCAGGCTGGAAGTGAGGTCTTAGGGAATGCTGCC
AAGGTGGTTTTATCAAAGGATTCGACGACAATTGTTGGTGATGGTAGTACACAGGATGCA
GTGAGCAAAAGAGTCGCGCAAATTAAAAGACTTCTTGAGGAAGCTGAACAAGACTACGAA
AAGGAAAAATTGAATGAGAGAATTGCAAAACTCTCTGGGGGTGTTGCCGTTATTCAGGTT
GGTGCACAAACTGAAACAGAACTCAAAGAAAAGAAATTGAGAGTAGAGGATGCACTCAAT
GCGACAAAGGCAGCTGTTGACGAAGGTATTGTAGTTGGTGGTGGATGCACCTTATTGCGG
CTTGCTGCCAAAGTTGAAGACATTAAAGGAACTCTTGATAATGATGAACAAAAGATTGGA
GCTGATATTGTCAAGAGAGCTTTGCGCTACCCTATGAAGTTAATAGCCAAGAATGCTGGT
GTTAATGGAAGTGTTGTGATTGAGAAGGTGTTGTCCAATGACAATCCAAACTATGGTTAT
AACGCGGCCACCGGAAACTATGAAGATTTAATGGCTGCTGGTATAATTGATCCTACAAAA
GTGGTAAGATGTTGCTTGGAGCATGCTGCTTCAGTTGCAAGGACCTTTTTGACATCAGAT
GCTGTGGTCACTGAGATCAAGGTGCCTGAACCTGCAGTTGCTGGGAACCCAATGGACAAT
TCAGGCTATGGACCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004499
PEP Infomation

pacid=37458844 transcript=PGSC0003DMT400006501 locus=PGSC0003DMG400002537 ID=PGSC0003DMT400006501.v4.03 annot-version=v4.03
Sequence

MAATFTSVCSIASTNQTVDKKFINSSETLSSFSGISLTSLGGRRKNKVLKKRNDSKIQAM
AKKLHFNQDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREV
ELEDPVENIGASLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPIQIAKGI
DRTTKALVSELKNMSKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGR
GSENNLFVVEGMQFDRGYISPYFVTDNEKMVAEYENCKLLLVDKKITNARDLVNVLEEAI
KNGYPILVIAEDIEQEALATLVVNKLRGALKIAALKAPGFGDRKSQYLDDIAILTGGTVI
REEVGLYLDQAGSEVLGNAAKVVLSKDSTTIVGDGSTQDAVSKRVAQIKRLLEEAEQDYE
KEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVDEGIVVGGGCTLLR
LAAKVEDIKGTLDNDEQKIGADIVKRALRYPMKLIAKNAGVNGSVVIEKVLSNDNPNYGY
NAATGNYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVTEIKVPEPAVAGNPMDN
SGYGP*

Transcript Sequence

Transcript ID

PGSC0003DMT400006501
Transcript Infomation

pacid=37458844 locus=PGSC0003DMG400002537 ID=PGSC0003DMT400006501.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTACGTTTACCTCAGTGTGTTCAATTGCTTCCACAAACCAGACAGTTGATAAA
AAATTCATCAATTCTTCTGAAACGTTATCTTCATTCTCTGGGATATCTTTGACTTCATTA
GGGGGCAGGAGAAAGAATAAAGTTTTAAAGAAGAGAAATGATTCCAAGATCCAGGCTATG
GCCAAGAAGTTACACTTCAATCAGGATGGTTCTGCCATCAAGAAGTTGCAAGCAGGTGTT
AACAAGCTTGCAGATCTAGTAGGTGTAACTCTTGGTCCAAAAGGAAGAAATGTAGTTCTT
GAGAGCAAATATGGATCTCCGAAAATTGTAAATGATGGTGTTACTGTGGCCAGAGAGGTT
GAACTAGAAGACCCTGTTGAGAATATTGGCGCAAGTTTGGTGAGACAAGCTGCATCAAAG
ACAAATGACTTGGCTGGGGATGGAACAACTACATCCGTTGTTTTGGCACAGGGGCTCATA
ACTGAGGGTGTTAAGGTTGTTGCAGCTGGTGCAAACCCTATTCAGATTGCCAAGGGCATC
GACAGGACCACCAAAGCCCTGGTTTCTGAGCTAAAAAATATGTCAAAAGAGGTCGAGGAC
AGTGAACTAGCAGATGTAGCTGCGGTTAGTGCAGGAAACAACTATGAAGTAGGAAATATG
ATAGCAGAAGCCTTGAGTAAAGTGGGTAGGAAAGGTGTAGTGACTCTTGAGGAAGGACGG
GGTTCTGAGAACAACTTATTTGTTGTGGAAGGCATGCAATTTGACCGTGGCTATATCTCT
CCATACTTTGTTACAGACAATGAGAAGATGGTAGCTGAATATGAAAACTGCAAGCTGCTT
TTGGTAGACAAAAAGATAACAAATGCAAGGGATTTAGTCAATGTTTTGGAAGAAGCAATC
AAGAACGGATACCCAATATTGGTAATCGCTGAAGACATAGAGCAGGAAGCTCTAGCCACA
CTGGTTGTGAACAAATTAAGAGGAGCATTGAAAATTGCTGCTCTTAAAGCTCCTGGTTTT
GGAGATCGAAAAAGCCAATATCTTGATGACATTGCTATCCTTACTGGAGGTACTGTCATT
CGAGAGGAGGTTGGTTTATACCTAGACCAGGCTGGAAGTGAGGTCTTAGGGAATGCTGCC
AAGGTGGTTTTATCAAAGGATTCGACGACAATTGTTGGTGATGGTAGTACACAGGATGCA
GTGAGCAAAAGAGTCGCGCAAATTAAAAGACTTCTTGAGGAAGCTGAACAAGACTACGAA
AAGGAAAAATTGAATGAGAGAATTGCAAAACTCTCTGGGGGTGTTGCCGTTATTCAGGTT
GGTGCACAAACTGAAACAGAACTCAAAGAAAAGAAATTGAGAGTAGAGGATGCACTCAAT
GCGACAAAGGCAGCTGTTGACGAAGGTATTGTAGTTGGTGGTGGATGCACCTTATTGCGG
CTTGCTGCCAAAGTTGAAGACATTAAAGGAACTCTTGATAATGATGAACAAAAGATTGGA
GCTGATATTGTCAAGAGAGCTTTGCGCTACCCTATGAAGTTAATAGCCAAGAATGCTGGT
GTTAATGGAAGTGTTGTGATTGAGAAGGTGTTGTCCAATGACAATCCAAACTATGGTTAT
AACGCGGCCACCGGAAACTATGAAGATTTAATGGCTGCTGGTATAATTGATCCTACAAAA
GTGGTAAGATGTTGCTTGGAGCATGCTGCTTCAGTTGCAAGGACCTTTTTGACATCAGAT
GCTGTGGTCACTGAGATCAAGGTGCCTGAACCTGCAGTTGCTGGGAACCCAATGGACAAT
TCAGGCTATGGACCCTAG