Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006469
CDS Infomation

pacid=37463883 polypeptide=PGSC0003DMP400004473 locus=PGSC0003DMG400002522 ID=PGSC0003DMT400006469.v4.03 annot-version=v4.03
Sequence

ATGCAGCTCAGGCATCCCTGTCACCGGCTCCGGCAGCAGTTCCGATGCTTCGCCACCAAG
TACAGTGGCAGAGTGGTGGTGGAAGCTGAAGATGGCCGTTCATTCGCCGTCGAAGTCGAT
GCCCCTACTCTTCACACCGACTCCAGAGGCTATGCTCTTCCCCGCCGTGACCTAATCTGT
AAGGTCTCCCAGATTCTGAAGTCACCTCCTTCCCCTTCTTCTGATCCTTTCCTTGACTTA
TCTGATTACCTCGATACATTGACAATAACCCTAACTCCCTCTGAAGCTTCTGAAGTTCTC
AAATCCCTCAAGTCTCCAAACCTCGCTCTTCGCTTCTTCCGATTTTGCCCCTCTGAAATC
CCTAAATTCCGCCATGACTGCTTCACTTACAACCGTATCCTTCTCATCCTCTCCAAATCT
TCTCTTCCGAACCGGCTGGATTGCGTCCGCGAGATTGTTGATGAAATGGAACGTACTGGT
ATTCAGGGAAACATATCCACTGTCAATCTTCTTATTGGAACATTTGGTGACGGCCAAGGG
AATGGTGTTAATGAGCTAACGAGGTGTTTGGGGTTGGTTCAAAAATGGGATTTGAAGTTG
AATTGCTATAGTTATAAGTGTCTTTTACAAGCCTATATCAGACTGTGCAATCCGGACAAG
GCTTTGAAAGTTTACCAAGAAATGAGGAGACGTGGGTACAGATTGGATATATTTGCATAC
AACATGCTTCTTGATGCTCTTGCTAGGGACCAAAAGGTTGATCAGGTCCACAAGGTTTTC
GAGGACATGAAGAAGTGGCACTGCGAACCTGATGAATATACGTATACCATTCTGATTAGA
ATGACTGGGAAATTAGGGAAGCCCGGTGAATCACTTTCTTTCTTTCAGGAAATGCTGTCA
AAGGGTATTTCACCAAATTTAATTGCTTATAATACTATGATCGAAGCTCTTGCGAAAGGC
CGCATGGTTGATAAGAGTATCTTTGTCTTTTCTAAGATGGTGGAGAATAGTTGCCGTCCC
AATGAATTTACTTACAGTATTATTTTAAATGTATTGGCCGCAGAAGGGCAACTTGGAAGA
CTTGATGAAGTTGTGGAAATATCTAAGAGATACATGAATAAATCGATATACGCATATCTT
GTTAGAACGTTGAGTAAAATAGGCCATGCAAGCGAAGCTCATAGGCTGTTTTGCAATATG
TGGAGCTTCCATGATAGAGGAGATCGTGATGCCTACTTATCCATGTTAGAGAGCTTATGC
AACTCTAAGAAAGTAACTGAGGCTATTGATCTGCTGAATAAGATGAATGAAAAGGGAGTA
AAAGCAGATAGCTTCATGTATAATACCGTCTTCTCTGCACTTGGGAAGCTAAAGCAGATT
CCTCATCTTCATGATCTCTATGAAAAGATGAAACAGGATGGCCCCTCACCAGACATATTT
ACTTATAACATTTTGATCTCTAGCTTTGGTAGAGCGGGGGAGGTTGGGGAAGCTCTCAAG
ATTTTTGAAGAACTTGAGAATAGCAATTGTAAACCTGATATTGTCTCCTACAACTCTTTA
ATAAATTGTCTGGGAAAGAATGGAGACATTGATGAAGCGCACATGAAATTCATCGAGATG
CAGGAGAAGGGCTTGAATCCTGATGTTGTAACATACAGCACTCTCATTGAGTGCTTTGGG
AAGACTGAAAAAGTTGAGACAGCACGTCGGCTATTTGATGAAATGCTTGCAGCTGGCTGT
TATCCTAATATAGTGACATACAATATCCTACTTGACTGTCTCGAGAGAAGTGGGAGAACT
TCAGAAGCTGTTAGTTTATATGCGAAATTGAAGGAACAAGGTTTGGCAGCTGATTCAATC
ACATACACCATCCTTGAACGTTTACAAAGTGGTTCTCATAGAACATCGAGAATTCGCAGG
AAAAATCCAATCACTGGTTGGGTGGTTAGCCCATTAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004473
PEP Infomation

pacid=37463883 transcript=PGSC0003DMT400006469 locus=PGSC0003DMG400002522 ID=PGSC0003DMT400006469.v4.03 annot-version=v4.03
Sequence

MQLRHPCHRLRQQFRCFATKYSGRVVVEAEDGRSFAVEVDAPTLHTDSRGYALPRRDLIC
KVSQILKSPPSPSSDPFLDLSDYLDTLTITLTPSEASEVLKSLKSPNLALRFFRFCPSEI
PKFRHDCFTYNRILLILSKSSLPNRLDCVREIVDEMERTGIQGNISTVNLLIGTFGDGQG
NGVNELTRCLGLVQKWDLKLNCYSYKCLLQAYIRLCNPDKALKVYQEMRRRGYRLDIFAY
NMLLDALARDQKVDQVHKVFEDMKKWHCEPDEYTYTILIRMTGKLGKPGESLSFFQEMLS
KGISPNLIAYNTMIEALAKGRMVDKSIFVFSKMVENSCRPNEFTYSIILNVLAAEGQLGR
LDEVVEISKRYMNKSIYAYLVRTLSKIGHASEAHRLFCNMWSFHDRGDRDAYLSMLESLC
NSKKVTEAIDLLNKMNEKGVKADSFMYNTVFSALGKLKQIPHLHDLYEKMKQDGPSPDIF
TYNILISSFGRAGEVGEALKIFEELENSNCKPDIVSYNSLINCLGKNGDIDEAHMKFIEM
QEKGLNPDVVTYSTLIECFGKTEKVETARRLFDEMLAAGCYPNIVTYNILLDCLERSGRT
SEAVSLYAKLKEQGLAADSITYTILERLQSGSHRTSRIRRKNPITGWVVSPLR*

Transcript Sequence

Transcript ID

PGSC0003DMT400006469
Transcript Infomation

pacid=37463883 locus=PGSC0003DMG400002522 ID=PGSC0003DMT400006469.v4.03 annot-version=v4.03
Sequence

ATGCAGCTCAGGCATCCCTGTCACCGGCTCCGGCAGCAGTTCCGATGCTTCGCCACCAAG
TACAGTGGCAGAGTGGTGGTGGAAGCTGAAGATGGCCGTTCATTCGCCGTCGAAGTCGAT
GCCCCTACTCTTCACACCGACTCCAGAGGCTATGCTCTTCCCCGCCGTGACCTAATCTGT
AAGGTCTCCCAGATTCTGAAGTCACCTCCTTCCCCTTCTTCTGATCCTTTCCTTGACTTA
TCTGATTACCTCGATACATTGACAATAACCCTAACTCCCTCTGAAGCTTCTGAAGTTCTC
AAATCCCTCAAGTCTCCAAACCTCGCTCTTCGCTTCTTCCGATTTTGCCCCTCTGAAATC
CCTAAATTCCGCCATGACTGCTTCACTTACAACCGTATCCTTCTCATCCTCTCCAAATCT
TCTCTTCCGAACCGGCTGGATTGCGTCCGCGAGATTGTTGATGAAATGGAACGTACTGGT
ATTCAGGGAAACATATCCACTGTCAATCTTCTTATTGGAACATTTGGTGACGGCCAAGGG
AATGGTGTTAATGAGCTAACGAGGTGTTTGGGGTTGGTTCAAAAATGGGATTTGAAGTTG
AATTGCTATAGTTATAAGTGTCTTTTACAAGCCTATATCAGACTGTGCAATCCGGACAAG
GCTTTGAAAGTTTACCAAGAAATGAGGAGACGTGGGTACAGATTGGATATATTTGCATAC
AACATGCTTCTTGATGCTCTTGCTAGGGACCAAAAGGTTGATCAGGTCCACAAGGTTTTC
GAGGACATGAAGAAGTGGCACTGCGAACCTGATGAATATACGTATACCATTCTGATTAGA
ATGACTGGGAAATTAGGGAAGCCCGGTGAATCACTTTCTTTCTTTCAGGAAATGCTGTCA
AAGGGTATTTCACCAAATTTAATTGCTTATAATACTATGATCGAAGCTCTTGCGAAAGGC
CGCATGGTTGATAAGAGTATCTTTGTCTTTTCTAAGATGGTGGAGAATAGTTGCCGTCCC
AATGAATTTACTTACAGTATTATTTTAAATGTATTGGCCGCAGAAGGGCAACTTGGAAGA
CTTGATGAAGTTGTGGAAATATCTAAGAGATACATGAATAAATCGATATACGCATATCTT
GTTAGAACGTTGAGTAAAATAGGCCATGCAAGCGAAGCTCATAGGCTGTTTTGCAATATG
TGGAGCTTCCATGATAGAGGAGATCGTGATGCCTACTTATCCATGTTAGAGAGCTTATGC
AACTCTAAGAAAGTAACTGAGGCTATTGATCTGCTGAATAAGATGAATGAAAAGGGAGTA
AAAGCAGATAGCTTCATGTATAATACCGTCTTCTCTGCACTTGGGAAGCTAAAGCAGATT
CCTCATCTTCATGATCTCTATGAAAAGATGAAACAGGATGGCCCCTCACCAGACATATTT
ACTTATAACATTTTGATCTCTAGCTTTGGTAGAGCGGGGGAGGTTGGGGAAGCTCTCAAG
ATTTTTGAAGAACTTGAGAATAGCAATTGTAAACCTGATATTGTCTCCTACAACTCTTTA
ATAAATTGTCTGGGAAAGAATGGAGACATTGATGAAGCGCACATGAAATTCATCGAGATG
CAGGAGAAGGGCTTGAATCCTGATGTTGTAACATACAGCACTCTCATTGAGTGCTTTGGG
AAGACTGAAAAAGTTGAGACAGCACGTCGGCTATTTGATGAAATGCTTGCAGCTGGCTGT
TATCCTAATATAGTGACATACAATATCCTACTTGACTGTCTCGAGAGAAGTGGGAGAACT
TCAGAAGCTGTTAGTTTATATGCGAAATTGAAGGAACAAGGTTTGGCAGCTGATTCAATC
ACATACACCATCCTTGAACGTTTACAAAGTGGTTCTCATAGAACATCGAGAATTCGCAGG
AAAAATCCAATCACTGGTTGGGTGGTTAGCCCATTAAGGTGA