Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006459
CDS Infomation

pacid=37462525 polypeptide=PGSC0003DMP400004464 locus=PGSC0003DMG400002519 ID=PGSC0003DMT400006459.v4.03 annot-version=v4.03
Sequence

ATGAGTATCCACAGACAGCAAATATTGGCATTTTTCTTTGTGGCTTTATTGGGCTTTATT
GACATCCGTCTGAATAATGCTCAAGATTCAACAACACTTGTTCCGGCAATCATTACATTT
GGTGATTCTGCTGTGGATGTAGGAAATAATGACTACATTCATACTCTTTTTAAGGCTAAT
TATCCTCCTTATGGAAGGGATTTTGTCACTCGTCAACCCACCGGTAGATTCTGCAATGGA
AAATTAGCTACTGATATCACTGCTGATACACTTGGGTTCACTACTTACCCGGCTGCATAT
TTGAGCCCTGAAGCATCAGGCAAGAATCTACTTATTGGTACTAATTTCGCTTCTGCTGCT
GCTGGATTTGATGATAAAACCGCCATCCTCAACCATGCAATTCCATTTTCAACACAGATG
CAATACTACAAGGAGTATCAATCCAAGCTAGCAAAAGTTGCAGGCAGCCAAAAAGCGGCA
TCCATCCTAAAGGATGCACTCTACATAATAAGTGCAGGAAGCAGTGATTTCTTACAGAAT
TACTACCTCAATCCGTATCTTAACAAACTCTACACTCCTGATCAGTATGGTTCTTATCTT
GTCGGCATATTCACTAGCTCCGTCAAGGATTTGTATGGCCAAGGAGCAAGAAGAATTGGG
GTAACTTCACTGCCGCCATTGGGCTGTCTCCCAGCTGCTAGAACATTATTCGGATTTCAT
GAAAGTGGATGTGTTTCAAGGATCAATTCAGATGCCCAACAATTCAACAAGAAAATGAAT
TCAGCTGCAGCACAGTTACAAAAGCAACTTCCTGAACTTAAGATTGCTATCTTTGACATT
TTCCAACCCCTATATGACCTCGTCAAATCTCCATCAGACCACGGATTCGCGGAAGCGAAC
AGAGGGTGTTGTGGAACAGGAACAGTGGAGACAACATCATTATTGTGCAACCCAAAATCA
CCAGGAACTTGTAGCAATGCAACACAATATGTGTTTTGGGATAGTGTACATCCATCTCAA
GCAGCTAACCAAGTTCTAGCTGATTCGCTCATTATTCAAGGCATCAACTTAATTGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400004464
PEP Infomation

pacid=37462525 transcript=PGSC0003DMT400006459 locus=PGSC0003DMG400002519 ID=PGSC0003DMT400006459.v4.03 annot-version=v4.03
Sequence

MSIHRQQILAFFFVALLGFIDIRLNNAQDSTTLVPAIITFGDSAVDVGNNDYIHTLFKAN
YPPYGRDFVTRQPTGRFCNGKLATDITADTLGFTTYPAAYLSPEASGKNLLIGTNFASAA
AGFDDKTAILNHAIPFSTQMQYYKEYQSKLAKVAGSQKAASILKDALYIISAGSSDFLQN
YYLNPYLNKLYTPDQYGSYLVGIFTSSVKDLYGQGARRIGVTSLPPLGCLPAARTLFGFH
ESGCVSRINSDAQQFNKKMNSAAAQLQKQLPELKIAIFDIFQPLYDLVKSPSDHGFAEAN
RGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADSLIIQGINLIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400006459
Transcript Infomation

pacid=37462525 locus=PGSC0003DMG400002519 ID=PGSC0003DMT400006459.v4.03 annot-version=v4.03
Sequence

ATGAGTATCCACAGACAGCAAATATTGGCATTTTTCTTTGTGGCTTTATTGGGCTTTATT
GACATCCGTCTGAATAATGCTCAAGATTCAACAACACTTGTTCCGGCAATCATTACATTT
GGTGATTCTGCTGTGGATGTAGGAAATAATGACTACATTCATACTCTTTTTAAGGCTAAT
TATCCTCCTTATGGAAGGGATTTTGTCACTCGTCAACCCACCGGTAGATTCTGCAATGGA
AAATTAGCTACTGATATCACTGCTGATACACTTGGGTTCACTACTTACCCGGCTGCATAT
TTGAGCCCTGAAGCATCAGGCAAGAATCTACTTATTGGTACTAATTTCGCTTCTGCTGCT
GCTGGATTTGATGATAAAACCGCCATCCTCAACCATGCAATTCCATTTTCAACACAGATG
CAATACTACAAGGAGTATCAATCCAAGCTAGCAAAAGTTGCAGGCAGCCAAAAAGCGGCA
TCCATCCTAAAGGATGCACTCTACATAATAAGTGCAGGAAGCAGTGATTTCTTACAGAAT
TACTACCTCAATCCGTATCTTAACAAACTCTACACTCCTGATCAGTATGGTTCTTATCTT
GTCGGCATATTCACTAGCTCCGTCAAGGATTTGTATGGCCAAGGAGCAAGAAGAATTGGG
GTAACTTCACTGCCGCCATTGGGCTGTCTCCCAGCTGCTAGAACATTATTCGGATTTCAT
GAAAGTGGATGTGTTTCAAGGATCAATTCAGATGCCCAACAATTCAACAAGAAAATGAAT
TCAGCTGCAGCACAGTTACAAAAGCAACTTCCTGAACTTAAGATTGCTATCTTTGACATT
TTCCAACCCCTATATGACCTCGTCAAATCTCCATCAGACCACGGATTCGCGGAAGCGAAC
AGAGGGTGTTGTGGAACAGGAACAGTGGAGACAACATCATTATTGTGCAACCCAAAATCA
CCAGGAACTTGTAGCAATGCAACACAATATGTGTTTTGGGATAGTGTACATCCATCTCAA
GCAGCTAACCAAGTTCTAGCTGATTCGCTCATTATTCAAGGCATCAACTTAATTGGATAA