Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006454
CDS Infomation

pacid=37461454 polypeptide=PGSC0003DMP400004459 locus=PGSC0003DMG401002516 ID=PGSC0003DMT400006454.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGACGCCGATGATGCCGCCGAACGCCGATGGTAGTGCACCGGCGGCTCCACCG
CTACCTGGGACGGACATGACGAGCATATGCTTCAGAGACCAGCTATGGCTGAATACTTAT
CCGCTCGACAGAAACCTAGTGTTCGACTATTTTGCACTCTCCCCGTTCTACGATTGGACC
TGCAATAATGAACAACTCCGTGCCCGCGCCATCCACCCGCTGGATTTCTCTCATATTTCG
AAAATGACGGGCATGGAATACACTTTGAGTGAAGTAATGGAGCCTAATCTCTTTGTCATC
CGTAAGCAAAAGAGGGATAGCCCTGAGAAGGTCACACCAATGCTGACTTATTACATCTTG
GATGGTTCAATATACCAAGCTCCACAGCTCTGCAATGTGTTTGCAGCTCGACTTGGGCGT
GCTCTATATCATATATCAAAAGCTTTCGGTACTGCATCCTCAAAGCTGGAAAAGATTGGA
TATGTGGAGTCGGAAAATGATAGCCAAGCATCTGAAACTAAGCCCGCCAAAGAGGCCATC
GACTTCAAGGAACTTAAGCGAGTTGATCACATCCTTGCTTCTCTACAACGGAAGCTACCA
CCAGTACCTCCGCCTCCACCTTTCCCAGAAGGCTATGCACCCCCTTCCACTTCAGAACCC
TCTGAAAACCAGCAACCAGAGACTCAGCCGCCTCCAATTGATCCTATTATTGATCAAGGC
CCGTCCAAGAGAATGAAGGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400004459
PEP Infomation

pacid=37461454 transcript=PGSC0003DMT400006454 locus=PGSC0003DMG401002516 ID=PGSC0003DMT400006454.v4.03 annot-version=v4.03
Sequence

MASTPMMPPNADGSAPAAPPLPGTDMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDWT
CNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPMLTYYIL
DGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENDSQASETKPAKEAI
DFKELKRVDHILASLQRKLPPVPPPPPFPEGYAPPSTSEPSENQQPETQPPPIDPIIDQG
PSKRMKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400006454
Transcript Infomation

pacid=37461454 locus=PGSC0003DMG401002516 ID=PGSC0003DMT400006454.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGACGCCGATGATGCCGCCGAACGCCGATGGTAGTGCACCGGCGGCTCCACCG
CTACCTGGGACGGACATGACGAGCATATGCTTCAGAGACCAGCTATGGCTGAATACTTAT
CCGCTCGACAGAAACCTAGTGTTCGACTATTTTGCACTCTCCCCGTTCTACGATTGGACC
TGCAATAATGAACAACTCCGTGCCCGCGCCATCCACCCGCTGGATTTCTCTCATATTTCG
AAAATGACGGGCATGGAATACACTTTGAGTGAAGTAATGGAGCCTAATCTCTTTGTCATC
CGTAAGCAAAAGAGGGATAGCCCTGAGAAGGTCACACCAATGCTGACTTATTACATCTTG
GATGGTTCAATATACCAAGCTCCACAGCTCTGCAATGTGTTTGCAGCTCGACTTGGGCGT
GCTCTATATCATATATCAAAAGCTTTCGGTACTGCATCCTCAAAGCTGGAAAAGATTGGA
TATGTGGAGTCGGAAAATGATAGCCAAGCATCTGAAACTAAGCCCGCCAAAGAGGCCATC
GACTTCAAGGAACTTAAGCGAGTTGATCACATCCTTGCTTCTCTACAACGGAAGCTACCA
CCAGTACCTCCGCCTCCACCTTTCCCAGAAGGCTATGCACCCCCTTCCACTTCAGAACCC
TCTGAAAACCAGCAACCAGAGACTCAGCCGCCTCCAATTGATCCTATTATTGATCAAGGC
CCGTCCAAGAGAATGAAGGTATGA