Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006440
CDS Infomation

pacid=37461705 polypeptide=PGSC0003DMP400004450 locus=PGSC0003DMG400002513 ID=PGSC0003DMT400006440.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGCGGTGGCTACTTTCGGCATTCGCTCCGTTCCTTCTAACATATGGCTCCAC
AAATTCGGTGCTCGAACGGCAGCTGCATCAATACGTTCACGTTCATTCACCACTCTCGCT
TCTCTTTCCCCCGTTGAAGATACTGAAGACATTCAATTGAACGTAATTCCAAAAGAAAAT
GCACGGGAATCGGTTTCTAGTACTAGCAACAACAACAATTACAAGTCTAATAAGTCTTAT
TATCCGAAGCGAGGGCAAACACTGGAGCTAGTATGCGAATCCCTTGCTTTCAAAGGAAAA
GGCGTCTGTAAGGTTGCTGACAGTGGTTTTGTACTCATGTGTGATCGTGCACTCCCTGGA
GAACGATTCATTGGCCGTGTCACTCGCAAAAAAGATAATTACGCTGAGGTAAAGAAGTTG
AAAACAATAACACCTCATTCAGACTACGTTGAAGCACCATGTGAATATGCATCACACTGT
GGAGGTTGCAAGACGCAGAGTTTGTCGTATGAAGCCCAGCTCAAGGCCAAAGAGCAACAA
GTTTGTGACCTGGTTGTTCATGTGGGCAAGTTTTCTGATCAAGAACCAGAATTTGCAGGT
GTCATGAAACCCATTGTTCCCTGTGATATCCAATTTCACTATAGGAACAAGATGGAATTC
TCTTTTGGTCCAAAGGGATGGGTACCTGCTGAACAGCTGCAAGAAAAATCTACTGATGAA
TGTGTCTATGCTTTGGGTCTGCATGCCCCTGGATTTTTTGATAAAGTTTTAAATGTGAAT
AAGTGCTTATTGCAAAGTGATTCAGCAAATGAGGTTCTCGCAACTGTGCAAGAATGCTGG
CGGGATCCAGAGTTGGGGCTTTCTCCGTGGAATGTGCACTCTCACACGGGCTTTCTGAAG
CATCTAATGCTTAGATCAGGCAGGAATATTGAAACTGGTCTTCCTGAACTTATGGTTAAC
TTTGTAACTTCTTCTGACAATCCTGAATGCTTGAGGCCCCTTGTTGAGAAAATCGCAACT
ATTCCTGAAGTGGTAAGCATTGTTAACAATGTGAATACTTCTATCGGCAACACATCTGTT
GGGGAGAAGGAATATACGTTGTATGGAAAATCTACCATCACAGAGATTTTGAGAGGGCTT
ACTTTCCAGATTTCAGCAAACTCTTTCTTTCAGACGAACACACGTCAGGCTGATGTTCTC
TATAAATTAATTGAGGATTGTGCATTTCTTAAAGGAGATGGGTCTGAAATTGTTCTTGAT
TTATTTTGTGGGACAGGAACCATTGGCCTTACACTGGCCAAAAGGGTGAAGCATGTTTAT
GGTTTTGAAGTAGTAGCTCAAGCTGTATCAGATGCACGTCAAAATGCCACTCTAAATTTC
ATCAATAATGCAACCTTTATCGAAGGTGATTTGAATAAAATTGATTCGACCTTCGCCAGC
AACTTGCCCAAGCCTGACATTGTTATCACAGATCCTAATCGCCCAGGAATGCACATAAAG
TTGATCAAATTTTTGCTAAGATTGAGAGCATCACGCATCATTTATGTATCGTGTAATCCT
GCCACGTGTGCTCGTGATCTTAATTATCTCTGCTATGGTGTGCCGGAGCAGAATATAGAG
GGACGTTATAGACTGAGTAGCTTACAACCAGTCGACATGTTTCCACACACACCTCATATT
GAATGTGTTTGCTCGCTTGAGCTTCGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004450
PEP Infomation

pacid=37461705 transcript=PGSC0003DMT400006440 locus=PGSC0003DMG400002513 ID=PGSC0003DMT400006440.v4.03 annot-version=v4.03
Sequence

MAAAVATFGIRSVPSNIWLHKFGARTAAASIRSRSFTTLASLSPVEDTEDIQLNVIPKEN
ARESVSSTSNNNNYKSNKSYYPKRGQTLELVCESLAFKGKGVCKVADSGFVLMCDRALPG
ERFIGRVTRKKDNYAEVKKLKTITPHSDYVEAPCEYASHCGGCKTQSLSYEAQLKAKEQQ
VCDLVVHVGKFSDQEPEFAGVMKPIVPCDIQFHYRNKMEFSFGPKGWVPAEQLQEKSTDE
CVYALGLHAPGFFDKVLNVNKCLLQSDSANEVLATVQECWRDPELGLSPWNVHSHTGFLK
HLMLRSGRNIETGLPELMVNFVTSSDNPECLRPLVEKIATIPEVVSIVNNVNTSIGNTSV
GEKEYTLYGKSTITEILRGLTFQISANSFFQTNTRQADVLYKLIEDCAFLKGDGSEIVLD
LFCGTGTIGLTLAKRVKHVYGFEVVAQAVSDARQNATLNFINNATFIEGDLNKIDSTFAS
NLPKPDIVITDPNRPGMHIKLIKFLLRLRASRIIYVSCNPATCARDLNYLCYGVPEQNIE
GRYRLSSLQPVDMFPHTPHIECVCSLELR*

Transcript Sequence

Transcript ID

PGSC0003DMT400006440
Transcript Infomation

pacid=37461705 locus=PGSC0003DMG400002513 ID=PGSC0003DMT400006440.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGCGGTGGCTACTTTCGGCATTCGCTCCGTTCCTTCTAACATATGGCTCCAC
AAATTCGGTGCTCGAACGGCAGCTGCATCAATACGTTCACGTTCATTCACCACTCTCGCT
TCTCTTTCCCCCGTTGAAGATACTGAAGACATTCAATTGAACGTAATTCCAAAAGAAAAT
GCACGGGAATCGGTTTCTAGTACTAGCAACAACAACAATTACAAGTCTAATAAGTCTTAT
TATCCGAAGCGAGGGCAAACACTGGAGCTAGTATGCGAATCCCTTGCTTTCAAAGGAAAA
GGCGTCTGTAAGGTTGCTGACAGTGGTTTTGTACTCATGTGTGATCGTGCACTCCCTGGA
GAACGATTCATTGGCCGTGTCACTCGCAAAAAAGATAATTACGCTGAGGTAAAGAAGTTG
AAAACAATAACACCTCATTCAGACTACGTTGAAGCACCATGTGAATATGCATCACACTGT
GGAGGTTGCAAGACGCAGAGTTTGTCGTATGAAGCCCAGCTCAAGGCCAAAGAGCAACAA
GTTTGTGACCTGGTTGTTCATGTGGGCAAGTTTTCTGATCAAGAACCAGAATTTGCAGGT
GTCATGAAACCCATTGTTCCCTGTGATATCCAATTTCACTATAGGAACAAGATGGAATTC
TCTTTTGGTCCAAAGGGATGGGTACCTGCTGAACAGCTGCAAGAAAAATCTACTGATGAA
TGTGTCTATGCTTTGGGTCTGCATGCCCCTGGATTTTTTGATAAAGTTTTAAATGTGAAT
AAGTGCTTATTGCAAAGTGATTCAGCAAATGAGGTTCTCGCAACTGTGCAAGAATGCTGG
CGGGATCCAGAGTTGGGGCTTTCTCCGTGGAATGTGCACTCTCACACGGGCTTTCTGAAG
CATCTAATGCTTAGATCAGGCAGGAATATTGAAACTGGTCTTCCTGAACTTATGGTTAAC
TTTGTAACTTCTTCTGACAATCCTGAATGCTTGAGGCCCCTTGTTGAGAAAATCGCAACT
ATTCCTGAAGTGGTAAGCATTGTTAACAATGTGAATACTTCTATCGGCAACACATCTGTT
GGGGAGAAGGAATATACGTTGTATGGAAAATCTACCATCACAGAGATTTTGAGAGGGCTT
ACTTTCCAGATTTCAGCAAACTCTTTCTTTCAGACGAACACACGTCAGGCTGATGTTCTC
TATAAATTAATTGAGGATTGTGCATTTCTTAAAGGAGATGGGTCTGAAATTGTTCTTGAT
TTATTTTGTGGGACAGGAACCATTGGCCTTACACTGGCCAAAAGGGTGAAGCATGTTTAT
GGTTTTGAAGTAGTAGCTCAAGCTGTATCAGATGCACGTCAAAATGCCACTCTAAATTTC
ATCAATAATGCAACCTTTATCGAAGGTGATTTGAATAAAATTGATTCGACCTTCGCCAGC
AACTTGCCCAAGCCTGACATTGTTATCACAGATCCTAATCGCCCAGGAATGCACATAAAG
TTGATCAAATTTTTGCTAAGATTGAGAGCATCACGCATCATTTATGTATCGTGTAATCCT
GCCACGTGTGCTCGTGATCTTAATTATCTCTGCTATGGTGTGCCGGAGCAGAATATAGAG
GGACGTTATAGACTGAGTAGCTTACAACCAGTCGACATGTTTCCACACACACCTCATATT
GAATGTGTTTGCTCGCTTGAGCTTCGGTGA