Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006407
CDS Infomation

pacid=37460015 polypeptide=PGSC0003DMP400004429 locus=PGSC0003DMG400002502 ID=PGSC0003DMT400006407.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAAGAAATCGCATTCCTCGGGAAGCATTTGATAACCGCCGGGGCTTTCCTGCA
GAAGGGCATATTGCCCGGGGTCCTATGCCTCGACCCACTCCTCATCCTGCCTTGTTAGAG
GAGGAACTTGAAATACAACATCTTGAGATACGCAGACTTCTGGGTGAAAACAGGAGATTA
GTTGAAGATCGAATAGCTCTTCAACGGGAATCAACTGCTGCAAAGGAGGAGGTATATCGA
ATGAACCTTGCCATAGGTGATATGCAAGCGGAGCATGAAATTCGCTCCAGGGAACTTATT
GAAAGAGGTTTGAAGCTTGAAGGAGATCTTCGAGCTACAGAACCTCTGAAAAATGAGGCT
AAACAGCTCCATGTTGAAGTTCAGAAGCTTAATATTATGAAGCAGGATCTAACTGGCCAG
GTACAGACCCTCACCAAGGACCTTGCCAAGCTACAAGCTGATAGCCAACAGATTCCTCAT
TTCAGGGGTGAGATTGATGGGCTGCATCAAGAGCTTTTGCGTGCTAGGTCTGCCATTGAG
TACGAAAAGAAGGCAAAAGTTGAACTCATGGATCAGAGACAGGCAATGGAGACAAATTTG
GTTACTATGGCACGTGAAGTTGAGAAGCTACGAGCTGAGCTTTCTAATTCTGATGGTAGA
GCATGGGCTGCAGGTGGATCATATGGGATGAGATATGGAAGACATGATGCAAGTTTCCCT
GCACCTTATGGCGAGGGATATGGGGTTCATATGGGTGCTGCTGACAAGGGTCCTTTGTAT
GGTGCTGCTTCAGCTTCACGGGGAGGACTTGAGAAACCTCAAATGAATCGTCGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004429
PEP Infomation

pacid=37460015 transcript=PGSC0003DMT400006407 locus=PGSC0003DMG400002502 ID=PGSC0003DMT400006407.v4.03 annot-version=v4.03
Sequence

MAGRNRIPREAFDNRRGFPAEGHIARGPMPRPTPHPALLEEELEIQHLEIRRLLGENRRL
VEDRIALQRESTAAKEEVYRMNLAIGDMQAEHEIRSRELIERGLKLEGDLRATEPLKNEA
KQLHVEVQKLNIMKQDLTGQVQTLTKDLAKLQADSQQIPHFRGEIDGLHQELLRARSAIE
YEKKAKVELMDQRQAMETNLVTMAREVEKLRAELSNSDGRAWAAGGSYGMRYGRHDASFP
APYGEGYGVHMGAADKGPLYGAASASRGGLEKPQMNRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400006407
Transcript Infomation

pacid=37460015 locus=PGSC0003DMG400002502 ID=PGSC0003DMT400006407.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAAGAAATCGCATTCCTCGGGAAGCATTTGATAACCGCCGGGGCTTTCCTGCA
GAAGGGCATATTGCCCGGGGTCCTATGCCTCGACCCACTCCTCATCCTGCCTTGTTAGAG
GAGGAACTTGAAATACAACATCTTGAGATACGCAGACTTCTGGGTGAAAACAGGAGATTA
GTTGAAGATCGAATAGCTCTTCAACGGGAATCAACTGCTGCAAAGGAGGAGGTATATCGA
ATGAACCTTGCCATAGGTGATATGCAAGCGGAGCATGAAATTCGCTCCAGGGAACTTATT
GAAAGAGGTTTGAAGCTTGAAGGAGATCTTCGAGCTACAGAACCTCTGAAAAATGAGGCT
AAACAGCTCCATGTTGAAGTTCAGAAGCTTAATATTATGAAGCAGGATCTAACTGGCCAG
GTACAGACCCTCACCAAGGACCTTGCCAAGCTACAAGCTGATAGCCAACAGATTCCTCAT
TTCAGGGGTGAGATTGATGGGCTGCATCAAGAGCTTTTGCGTGCTAGGTCTGCCATTGAG
TACGAAAAGAAGGCAAAAGTTGAACTCATGGATCAGAGACAGGCAATGGAGACAAATTTG
GTTACTATGGCACGTGAAGTTGAGAAGCTACGAGCTGAGCTTTCTAATTCTGATGGTAGA
GCATGGGCTGCAGGTGGATCATATGGGATGAGATATGGAAGACATGATGCAAGTTTCCCT
GCACCTTATGGCGAGGGATATGGGGTTCATATGGGTGCTGCTGACAAGGGTCCTTTGTAT
GGTGCTGCTTCAGCTTCACGGGGAGGACTTGAGAAACCTCAAATGAATCGTCGCTGA