Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006398
CDS Infomation

pacid=37459298 polypeptide=PGSC0003DMP400004422 locus=PGSC0003DMG400002499 ID=PGSC0003DMT400006398.v4.03 annot-version=v4.03
Sequence

ATGGATAGACGAAGATCTTTGTGGCTTACTGTCATCTTCATCTCTTTGTTATCTTCTGCT
CACTCCTTTTATTTACCTGGCGTTGCTCCTCGCAATGTTCAAACTGGTGAACCTCTTAAT
ATCAAAGTGAACAAGCTGTCATCTACAAAAACACAACTTCCCTATGACTACTACTTCTTG
AAGTACTGCAGGCCTACCAAGATTTTGAATAGTGCAGAGAATTTAGGGGAGGTTCTGCGA
GGTGATCGCATAGAGAATTCAGTGTATAGTTTTCAAATGAGACAAGAACAACCATGCCAA
GTGATTTGTAAGCAAAAGCTCAATGCTGAATCTGCAAAGAACTTCAAGGAGATGATTGAT
GATGAATACAGAGTTAATATGATTTTGGATAACCTTCCAGTTGCAGTTCTTAGACAAAGG
CGGGATGGAATTAAATCAATTACTTATGAGCATGGTTTCCGTGTTGGATTCAAGGGGAAT
TATGCTGGGAGCAAAGAGGAGAAATATTTCATCAACAACCACTTGAGCTTCCGAGTCATG
TACCACAAGGATCCTGAAACCGATACTGCTCGTATTGTTGGATTTGAAGTGACACCAAAC
AGCATTAATCATGAGTACAAGGAGTGGGATGAAAAGAACCCTCAGGTGACAACGTGCAAT
GAGAAAACAAAAGATTTGGTTCCAGGTAGCTCTGTTCCCCAAGAAGTAGATGCAGATAAG
GATGTTGTATTCACCTATGATGTTTCTTTCGAGGAAAGCGATGTAAAATGGGCTTCTCGT
TGGGATACATACCTGCTCATGAATGATGATCAGATTCATTGGTTTTCCATCATAAATTCC
CTTATGATTGTCCTATTCCTTTCTGGTATGGTTGCGATGATCATGATGAGAACTTTGTAC
AGAGATATCGCAAACTATAATCAATTGGAAACGCAAGATGAGGCTCAGGAAGAAACAGGA
TGGAAACTTGTTCATGGGGATGTTTTTCGTGTTCCAACTAATTCTGGGTTACTGTGTGTT
TATGTCGGAACTGGTGTCCAAATATTTGGTATGACACTTGTGACAATGATTTTCGCTCTT
CTGGGTTTCTTATCACCTTCAAATCGTGGTGGGCTTATGACTGCTATGGTTCTACTATGG
GTTTTCATGGGCTTGTTAGCTGGCTATTCTTCTGCTCGTTTCTACAAAATGTTCAAAGGA
ACAGAGTGGAAAAGGATTACCTTGAAAACTGCTTTCATGTTCCCCGGAATACTTTTTGCC
ATCTTCTTTGTGCTGAATGCTCTTATCTGGGAAGAGCATTCTTCTGGAGCATTGCCATTT
GGCACTATGTTGGCTCTAGTGTGCTTGTGGTTTGGGATTTCAGTACCTTTAGTATTTGTT
GGCAGCTACCTTGGTTACAAAAAACCAGCCATTGAAGACCCTGTCAAGACGAACAAAATC
CCCAGGCAAGTACCAGAGCAAGCATGGTATATGAAACCGGCCTTTTCGGTACTTATTGGG
GGCATCCTTCCTTTTGGAGCTGTTTTCATCGAGCTATTCTTCATCTTGACGTCCATATGG
CTGAACCAGTTCTACTACATCTTTGGCTTCCTCTTCATTGTTTTCGTGATCTTGATAATC
ACATGTGCAGAGATAACTGTTGTGCTGTGCTACTTCCAGTTGTGCAGTGAAGACTATAAT
TGGTGGTGGAGAGCTTATCTGACTGCTGGATCCTCCGCATTATACTTGTTTCTCTACTCT
ATTTTCTATTTCTTCACCAAGTTGGAGATCAGCAAACTGGTTTCAGGCATATTGTACTTT
GGTTACATGTTGATCGCATCATATGCCTTCTTTGTGTTGACAGGAACAATTGGCTTCTAT
GCTTGCTTCTGGTTTGTTCGGAAGATCTACTCCTCGGTGAAGATTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004422
PEP Infomation

pacid=37459298 transcript=PGSC0003DMT400006398 locus=PGSC0003DMG400002499 ID=PGSC0003DMT400006398.v4.03 annot-version=v4.03
Sequence

MDRRRSLWLTVIFISLLSSAHSFYLPGVAPRNVQTGEPLNIKVNKLSSTKTQLPYDYYFL
KYCRPTKILNSAENLGEVLRGDRIENSVYSFQMRQEQPCQVICKQKLNAESAKNFKEMID
DEYRVNMILDNLPVAVLRQRRDGIKSITYEHGFRVGFKGNYAGSKEEKYFINNHLSFRVM
YHKDPETDTARIVGFEVTPNSINHEYKEWDEKNPQVTTCNEKTKDLVPGSSVPQEVDADK
DVVFTYDVSFEESDVKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLY
RDIANYNQLETQDEAQEETGWKLVHGDVFRVPTNSGLLCVYVGTGVQIFGMTLVTMIFAL
LGFLSPSNRGGLMTAMVLLWVFMGLLAGYSSARFYKMFKGTEWKRITLKTAFMFPGILFA
IFFVLNALIWEEHSSGALPFGTMLALVCLWFGISVPLVFVGSYLGYKKPAIEDPVKTNKI
PRQVPEQAWYMKPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILII
TCAEITVVLCYFQLCSEDYNWWWRAYLTAGSSALYLFLYSIFYFFTKLEISKLVSGILYF
GYMLIASYAFFVLTGTIGFYACFWFVRKIYSSVKID*

Transcript Sequence

Transcript ID

PGSC0003DMT400006398
Transcript Infomation

pacid=37459298 locus=PGSC0003DMG400002499 ID=PGSC0003DMT400006398.v4.03 annot-version=v4.03
Sequence

ATGGATAGACGAAGATCTTTGTGGCTTACTGTCATCTTCATCTCTTTGTTATCTTCTGCT
CACTCCTTTTATTTACCTGGCGTTGCTCCTCGCAATGTTCAAACTGGTGAACCTCTTAAT
ATCAAAGTGAACAAGCTGTCATCTACAAAAACACAACTTCCCTATGACTACTACTTCTTG
AAGTACTGCAGGCCTACCAAGATTTTGAATAGTGCAGAGAATTTAGGGGAGGTTCTGCGA
GGTGATCGCATAGAGAATTCAGTGTATAGTTTTCAAATGAGACAAGAACAACCATGCCAA
GTGATTTGTAAGCAAAAGCTCAATGCTGAATCTGCAAAGAACTTCAAGGAGATGATTGAT
GATGAATACAGAGTTAATATGATTTTGGATAACCTTCCAGTTGCAGTTCTTAGACAAAGG
CGGGATGGAATTAAATCAATTACTTATGAGCATGGTTTCCGTGTTGGATTCAAGGGGAAT
TATGCTGGGAGCAAAGAGGAGAAATATTTCATCAACAACCACTTGAGCTTCCGAGTCATG
TACCACAAGGATCCTGAAACCGATACTGCTCGTATTGTTGGATTTGAAGTGACACCAAAC
AGCATTAATCATGAGTACAAGGAGTGGGATGAAAAGAACCCTCAGGTGACAACGTGCAAT
GAGAAAACAAAAGATTTGGTTCCAGGTAGCTCTGTTCCCCAAGAAGTAGATGCAGATAAG
GATGTTGTATTCACCTATGATGTTTCTTTCGAGGAAAGCGATGTAAAATGGGCTTCTCGT
TGGGATACATACCTGCTCATGAATGATGATCAGATTCATTGGTTTTCCATCATAAATTCC
CTTATGATTGTCCTATTCCTTTCTGGTATGGTTGCGATGATCATGATGAGAACTTTGTAC
AGAGATATCGCAAACTATAATCAATTGGAAACGCAAGATGAGGCTCAGGAAGAAACAGGA
TGGAAACTTGTTCATGGGGATGTTTTTCGTGTTCCAACTAATTCTGGGTTACTGTGTGTT
TATGTCGGAACTGGTGTCCAAATATTTGGTATGACACTTGTGACAATGATTTTCGCTCTT
CTGGGTTTCTTATCACCTTCAAATCGTGGTGGGCTTATGACTGCTATGGTTCTACTATGG
GTTTTCATGGGCTTGTTAGCTGGCTATTCTTCTGCTCGTTTCTACAAAATGTTCAAAGGA
ACAGAGTGGAAAAGGATTACCTTGAAAACTGCTTTCATGTTCCCCGGAATACTTTTTGCC
ATCTTCTTTGTGCTGAATGCTCTTATCTGGGAAGAGCATTCTTCTGGAGCATTGCCATTT
GGCACTATGTTGGCTCTAGTGTGCTTGTGGTTTGGGATTTCAGTACCTTTAGTATTTGTT
GGCAGCTACCTTGGTTACAAAAAACCAGCCATTGAAGACCCTGTCAAGACGAACAAAATC
CCCAGGCAAGTACCAGAGCAAGCATGGTATATGAAACCGGCCTTTTCGGTACTTATTGGG
GGCATCCTTCCTTTTGGAGCTGTTTTCATCGAGCTATTCTTCATCTTGACGTCCATATGG
CTGAACCAGTTCTACTACATCTTTGGCTTCCTCTTCATTGTTTTCGTGATCTTGATAATC
ACATGTGCAGAGATAACTGTTGTGCTGTGCTACTTCCAGTTGTGCAGTGAAGACTATAAT
TGGTGGTGGAGAGCTTATCTGACTGCTGGATCCTCCGCATTATACTTGTTTCTCTACTCT
ATTTTCTATTTCTTCACCAAGTTGGAGATCAGCAAACTGGTTTCAGGCATATTGTACTTT
GGTTACATGTTGATCGCATCATATGCCTTCTTTGTGTTGACAGGAACAATTGGCTTCTAT
GCTTGCTTCTGGTTTGTTCGGAAGATCTACTCCTCGGTGAAGATTGATTGA