Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006390
CDS Infomation

pacid=37460940 polypeptide=PGSC0003DMP400004416 locus=PGSC0003DMG400002497 ID=PGSC0003DMT400006390.v4.03 annot-version=v4.03
Sequence

ATGGGGTTGCTGCAGAGTTTCATGTTGTTGAGGTTCTTGGTGATTCTAAGTATTTTTTCA
ATCCAATTATCTGCAGGATTCAACCTACATTCACTGAAAACAGCAGCTTCTGCATTTCTC
AAGGACGGACGAATTGATCTTAGTGTACAGAGAAATGCAGGATCACATAAATCCCTCCTA
CAAGAAGATTTGTTTCCCACTCCAACTTCTCGATGGAAGAGACATGACAGGTTTGCTGCT
GCGCCCCATCTCGAGGCATTTCACAGTGCTCCACACCCATATCATCATCCAACTAAAGCT
ACTTATCAGCACAAGATCTTGGAACCATCTAATTACGCGGATGCACCTTCAACTTCACCC
CATTTTAGGAATTCTGGAGGAAAGCAAGTACACAGTTCTGCATCCGCGCCTTCAATCTCC
TCTATCAGGCATCATCACAGGAGAAACAAACACAGTGACTTTACTAAACCATATGATCAC
CTCCATCCACCCAGTTCAAGCTGGTCAGGTCCTTCGATCTCTCCGTTCACGTCTCCTGTT
CCTTCTTCAATAAGTTGGGCACCTGTATCATCACCGATATTCCAACCTAGTCACACGGGA
ATTCCCATGAGTACACCTACAATATCGCCAACGAGTTCATCTATAAAAGGAAAGAAACTG
AGACCACCACCTTTACCTGTTATGACACTGCCACCACCACCTCCAAATCATGATTGTAGT
TCTTTGACATGCACTGAGCCGTTGACGTACACACCTCCTGGATCACCCTGCGGCTGTGTG
TGGCCCATTCAGGTTGCGATGCGCCTCAATGTCACACTCTATACCTTCTTTCCTTTGGTA
TCTGAGCTAGCCAAGGTAATTGCTGCTGGTGTTTCGCTAAACATGAGTCAAGTGCGCATT
ATGGGAGCAAATGCAGCTGACCAACAGCTTGAGAAAACAATTGTACATATCAACTTGGTT
CCTACAGATGGAAAGTTTGATGCTGCCACAGCTTTTACCATCTATCAGAAGTTCTGGAAG
AGGGCGTTATTCATTAAGACTATGGATTTTGGTGCCTATGAGATGGTTTATGTCCGTTAT
CCAGGGTTACCACCGTCTCCACCTTCACGTCATTCGAGCAGTGCTACTATTGATGATCTA
CCAGCCTATCCTGGCAATGAAAATGATGGAATGACAATCAAACCTCTGGGGGTAGATGTG
TCATCAAGAATGAGAAAGAAGGGTATAGCTAGAAATATGATCATTGTGATCGTCATATCA
TCAATCACAGCCTTTGTTGTGTGCATGGGATTTATTTGGCTTCTGTTGTTTAAGTGCGGA
TGTTATGCTCAATCACCCGAGCAACCTCCACATATTTTAATCTCCTCCCAAGGGAAAACA
TCAGGTGGTACTGGATCTATGATTTTGGCAAGTAAGCCCAGCTCAAAATCCATGTCCTTC
AGTTCTAGTATTTTAGCTTACACAGGAACTGCGAAAATTTTCAGTACAAACGATATAGAG
AGAGCCACTAACAACTTTGACATTTCAAAGGTCCTTGGGGAAGGTGGTTTTGGACTTGTG
TACAGTGGAACCCTTGATGATGGAAGGAAAGTAGCAGTTAAGGTTTTAAAAAGAGATGAT
CGGCAGGGAGGTCGTGAGTTTTTGGCGGAAGTTGAGATGCTTAGTAGGCTGCATCACAGA
AACTTAGTCAAATTGATAGGTATTTGCACCGAGGAAAACTGTCGCTGCCTGGTCTATGAA
CTTGTTCCTAATGGGAGTGTAGAATCACATTTACATGGAATTGATAAAGAGGCTTCTCCT
CTTGATTGGTATGCAAGAATGAAGATTGCATTAGGTGCAGCTCGAGGATTGGCATATCTG
CATGAGGACTCGAGCCCTCGTGTAATACACAGGGACTTCAAGTCTAGTAACATCTTGCTG
GAACATGATTTTACACCAAAAGTTTCAGACTTTGGCTTGGCTAGATCAGCACTGGAGGAG
GGAAACAAACATATCTCCACTCATGTGATGGGCACTTTTGGCTACCTAGCTCCAGAATAT
GCAATGACTGGCCATCTCCTGGTGAAAAGTGATGTTTATAGCTATGGTGTAGTTCTCCTT
GAACTTTTAAGCGGACGAAAACCTGTGGATCTATCACAACCTCCAGGTCAAGAAAATCTT
GTAGCCTGGGCTCGTCCGCTCCTGACAACCAAGGAAGGTTTAGAAATAATAATAGATAAA
GCTATAGAGTCTGATATCCAAATTGATAGTATCAGCAAAGTTGCAGCAATAGCATCAATG
TGTGTACAGCCAGAAGTATCGCATCGTCCTTTCATGGGAGAAGTGGTTCAAGCCTTGAAA
TTAGTATGTGATGAATTTGATGATACACGAGAGCCTATGTCCCGAAGTTGCAGTCACGAG
GACCTTTCTATGACAGACACTTCACTAGTCCATAAATCAATTCCAGGTTTTGATTCTCCT
TTAAATGTCCAAATGGCATTATCAGCTACAGAGTTAAAGAGTGCATCAGCTAGATACGGA
ACACTGGAATCTGAGTCTTTTAGGAGACAATTCAATTCCGCTCCTTTGAAAATGGGAAGA
AAAAGGAATTTCTGGCAAAGGTTGAGAGTTCTTTCAAGTGGCAGCATGAGTGAACATAGT
TTTTCATCAAAAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400004416
PEP Infomation

pacid=37460940 transcript=PGSC0003DMT400006390 locus=PGSC0003DMG400002497 ID=PGSC0003DMT400006390.v4.03 annot-version=v4.03
Sequence

MGLLQSFMLLRFLVILSIFSIQLSAGFNLHSLKTAASAFLKDGRIDLSVQRNAGSHKSLL
QEDLFPTPTSRWKRHDRFAAAPHLEAFHSAPHPYHHPTKATYQHKILEPSNYADAPSTSP
HFRNSGGKQVHSSASAPSISSIRHHHRRNKHSDFTKPYDHLHPPSSSWSGPSISPFTSPV
PSSISWAPVSSPIFQPSHTGIPMSTPTISPTSSSIKGKKLRPPPLPVMTLPPPPPNHDCS
SLTCTEPLTYTPPGSPCGCVWPIQVAMRLNVTLYTFFPLVSELAKVIAAGVSLNMSQVRI
MGANAADQQLEKTIVHINLVPTDGKFDAATAFTIYQKFWKRALFIKTMDFGAYEMVYVRY
PGLPPSPPSRHSSSATIDDLPAYPGNENDGMTIKPLGVDVSSRMRKKGIARNMIIVIVIS
SITAFVVCMGFIWLLLFKCGCYAQSPEQPPHILISSQGKTSGGTGSMILASKPSSKSMSF
SSSILAYTGTAKIFSTNDIERATNNFDISKVLGEGGFGLVYSGTLDDGRKVAVKVLKRDD
RQGGREFLAEVEMLSRLHHRNLVKLIGICTEENCRCLVYELVPNGSVESHLHGIDKEASP
LDWYARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSALEE
GNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPPGQENL
VAWARPLLTTKEGLEIIIDKAIESDIQIDSISKVAAIASMCVQPEVSHRPFMGEVVQALK
LVCDEFDDTREPMSRSCSHEDLSMTDTSLVHKSIPGFDSPLNVQMALSATELKSASARYG
TLESESFRRQFNSAPLKMGRKRNFWQRLRVLSSGSMSEHSFSSKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400006390
Transcript Infomation

pacid=37460940 locus=PGSC0003DMG400002497 ID=PGSC0003DMT400006390.v4.03 annot-version=v4.03
Sequence

ATGGGGTTGCTGCAGAGTTTCATGTTGTTGAGGTTCTTGGTGATTCTAAGTATTTTTTCA
ATCCAATTATCTGCAGGATTCAACCTACATTCACTGAAAACAGCAGCTTCTGCATTTCTC
AAGGACGGACGAATTGATCTTAGTGTACAGAGAAATGCAGGATCACATAAATCCCTCCTA
CAAGAAGATTTGTTTCCCACTCCAACTTCTCGATGGAAGAGACATGACAGGTTTGCTGCT
GCGCCCCATCTCGAGGCATTTCACAGTGCTCCACACCCATATCATCATCCAACTAAAGCT
ACTTATCAGCACAAGATCTTGGAACCATCTAATTACGCGGATGCACCTTCAACTTCACCC
CATTTTAGGAATTCTGGAGGAAAGCAAGTACACAGTTCTGCATCCGCGCCTTCAATCTCC
TCTATCAGGCATCATCACAGGAGAAACAAACACAGTGACTTTACTAAACCATATGATCAC
CTCCATCCACCCAGTTCAAGCTGGTCAGGTCCTTCGATCTCTCCGTTCACGTCTCCTGTT
CCTTCTTCAATAAGTTGGGCACCTGTATCATCACCGATATTCCAACCTAGTCACACGGGA
ATTCCCATGAGTACACCTACAATATCGCCAACGAGTTCATCTATAAAAGGAAAGAAACTG
AGACCACCACCTTTACCTGTTATGACACTGCCACCACCACCTCCAAATCATGATTGTAGT
TCTTTGACATGCACTGAGCCGTTGACGTACACACCTCCTGGATCACCCTGCGGCTGTGTG
TGGCCCATTCAGGTTGCGATGCGCCTCAATGTCACACTCTATACCTTCTTTCCTTTGGTA
TCTGAGCTAGCCAAGGTAATTGCTGCTGGTGTTTCGCTAAACATGAGTCAAGTGCGCATT
ATGGGAGCAAATGCAGCTGACCAACAGCTTGAGAAAACAATTGTACATATCAACTTGGTT
CCTACAGATGGAAAGTTTGATGCTGCCACAGCTTTTACCATCTATCAGAAGTTCTGGAAG
AGGGCGTTATTCATTAAGACTATGGATTTTGGTGCCTATGAGATGGTTTATGTCCGTTAT
CCAGGGTTACCACCGTCTCCACCTTCACGTCATTCGAGCAGTGCTACTATTGATGATCTA
CCAGCCTATCCTGGCAATGAAAATGATGGAATGACAATCAAACCTCTGGGGGTAGATGTG
TCATCAAGAATGAGAAAGAAGGGTATAGCTAGAAATATGATCATTGTGATCGTCATATCA
TCAATCACAGCCTTTGTTGTGTGCATGGGATTTATTTGGCTTCTGTTGTTTAAGTGCGGA
TGTTATGCTCAATCACCCGAGCAACCTCCACATATTTTAATCTCCTCCCAAGGGAAAACA
TCAGGTGGTACTGGATCTATGATTTTGGCAAGTAAGCCCAGCTCAAAATCCATGTCCTTC
AGTTCTAGTATTTTAGCTTACACAGGAACTGCGAAAATTTTCAGTACAAACGATATAGAG
AGAGCCACTAACAACTTTGACATTTCAAAGGTCCTTGGGGAAGGTGGTTTTGGACTTGTG
TACAGTGGAACCCTTGATGATGGAAGGAAAGTAGCAGTTAAGGTTTTAAAAAGAGATGAT
CGGCAGGGAGGTCGTGAGTTTTTGGCGGAAGTTGAGATGCTTAGTAGGCTGCATCACAGA
AACTTAGTCAAATTGATAGGTATTTGCACCGAGGAAAACTGTCGCTGCCTGGTCTATGAA
CTTGTTCCTAATGGGAGTGTAGAATCACATTTACATGGAATTGATAAAGAGGCTTCTCCT
CTTGATTGGTATGCAAGAATGAAGATTGCATTAGGTGCAGCTCGAGGATTGGCATATCTG
CATGAGGACTCGAGCCCTCGTGTAATACACAGGGACTTCAAGTCTAGTAACATCTTGCTG
GAACATGATTTTACACCAAAAGTTTCAGACTTTGGCTTGGCTAGATCAGCACTGGAGGAG
GGAAACAAACATATCTCCACTCATGTGATGGGCACTTTTGGCTACCTAGCTCCAGAATAT
GCAATGACTGGCCATCTCCTGGTGAAAAGTGATGTTTATAGCTATGGTGTAGTTCTCCTT
GAACTTTTAAGCGGACGAAAACCTGTGGATCTATCACAACCTCCAGGTCAAGAAAATCTT
GTAGCCTGGGCTCGTCCGCTCCTGACAACCAAGGAAGGTTTAGAAATAATAATAGATAAA
GCTATAGAGTCTGATATCCAAATTGATAGTATCAGCAAAGTTGCAGCAATAGCATCAATG
TGTGTACAGCCAGAAGTATCGCATCGTCCTTTCATGGGAGAAGTGGTTCAAGCCTTGAAA
TTAGTATGTGATGAATTTGATGATACACGAGAGCCTATGTCCCGAAGTTGCAGTCACGAG
GACCTTTCTATGACAGACACTTCACTAGTCCATAAATCAATTCCAGGTTTTGATTCTCCT
TTAAATGTCCAAATGGCATTATCAGCTACAGAGTTAAAGAGTGCATCAGCTAGATACGGA
ACACTGGAATCTGAGTCTTTTAGGAGACAATTCAATTCCGCTCCTTTGAAAATGGGAAGA
AAAAGGAATTTCTGGCAAAGGTTGAGAGTTCTTTCAAGTGGCAGCATGAGTGAACATAGT
TTTTCATCAAAAACATGA