Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006386
CDS Infomation

pacid=37461387 polypeptide=PGSC0003DMP400004413 locus=PGSC0003DMG400002495 ID=PGSC0003DMT400006386.v4.03 annot-version=v4.03
Sequence

ATGATGATGAAGGATTTAATGAATCAACAAGCTCAAGTACCTGTTGTTGTTATGGAGGAG
AACATGTCCAATTTAACTTCTGCATCTGGTGAAGCAAGTGTATCTTCTTCGAATCGAAAT
GATAATAATAATAATAATAATAATAATATTTATCCTCATCATCAGTATAACTTTGCTCCT
CCAAATCAACAAACTCAACCTGCACAACAAATCAAGAAGAAGAGAAATCAACCTGGGAAT
CCAGACCCAGAAGCTGAAGTGATAGCTTTGTCACCAAAGACACTAATGGCAACCAATAGA
TTTGTTTGTGAAATCTGTAACAAAGGATTTCAAAGAGATCAGAATCTGCAGCTTCACAGA
AGAGGACACAACTTACCATGGAAGCTCAAGCAAAGAACAAGCAAAGAAATAAGAAAAAAA
GTGTATGTTTGCCCAGAAACCAGCTGTGTTCATCATGACCCAGCAAGAGCTCTTGGAGAT
CTCACTGGAATCAAAAAACACTTTTGTAGAAAACATGGAGAGAAGAAGTGGAAATGTGAG
AAATGTTCAAAGCGTTATGCAGTTCAATCTGACTGGAAAGCTCACTCCAAAACTTGTGGT
ACCAAAGAGTATAGATGTGACTGTGGAACGCTTTTTTCAAGGAGGGATAGTTTCATAACT
CACAGAGCATTTTGCGATGCATTAGCGGAAGAAAGTGCAAGAGCGATAACAGGAAATCCA
ATTCTCCCATCTCAAGCTGGTTCTTCGACATCTCAAATGAATTTTCAGTTTCAACCATTT
AACCATGAAATTCCAGTTACATTTTCCTTGAAGAAAGAGCAACAAACTGGTTTCAATTTG
AGGCCTGAGATTCCGCCATGGCTATTGGTTGGAGGTGGTGGTGGTCCTGGACCTGGTCCT
CCACAACCACACCCTATTGACCTAAGTTCATCGATCTTTCAATCATCTAGGTTCAGTGAT
CAGGACTACACGCAGAGCCACCACCACCAACAAGGCGGCTTTATGAACCCTAACCCTAGT
CTATCCGGACCTACATCTGGAGCAATGGCCTCTCCACATATTTCTGCAACTGCGTTGTTG
CAGAAGGCAGCTCAGATGGGTGCGACCATGAGTAACAAAGCGAGTACTGTTTCTGCAGTT
TCATCAGGCCCAGGCCCAGCCATGCTGATGAGACCCCACCAAATTCACGTGTCTGCTACT
GCTACTGCTGCTGTGTCTGTTAGCAACACTACAGATTTTGGACTCAATTTGTCTTCACGT
GAAGACCTCACCACTGGTTTTTTCAATAGCTTGGCTTCATATGGGAATAAAGCTGCTAAT
CCCTCTGCTGTTATTGCTCCTGTTACAATCCCATTATCAACTGCACCTCATCCCACTCCT
TCTCTTCAGGATATGATGAATTCGTACTCATCCGCTAATCCTACAGGATTTGAAGGATCG
AATTTCGACGATCCATTTAGCATTTTGAATCCGAAAAACGAAAATGGCGGTGGTAACGAT
GATATGACCAAAGATTTCTTAGGCTTAAGACCTCTTTCTCATAGCGACATTTTCAACATA
GCTGGTCTAGTTAAGTACACTCCGAACGAAAATCAATCGCAAAATCACAAAACATGGCAA
AGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004413
PEP Infomation

pacid=37461387 transcript=PGSC0003DMT400006386 locus=PGSC0003DMG400002495 ID=PGSC0003DMT400006386.v4.03 annot-version=v4.03
Sequence

MMMKDLMNQQAQVPVVVMEENMSNLTSASGEASVSSSNRNDNNNNNNNNIYPHHQYNFAP
PNQQTQPAQQIKKKRNQPGNPDPEAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHR
RGHNLPWKLKQRTSKEIRKKVYVCPETSCVHHDPARALGDLTGIKKHFCRKHGEKKWKCE
KCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAEESARAITGNP
ILPSQAGSSTSQMNFQFQPFNHEIPVTFSLKKEQQTGFNLRPEIPPWLLVGGGGGPGPGP
PQPHPIDLSSSIFQSSRFSDQDYTQSHHHQQGGFMNPNPSLSGPTSGAMASPHISATALL
QKAAQMGATMSNKASTVSAVSSGPGPAMLMRPHQIHVSATATAAVSVSNTTDFGLNLSSR
EDLTTGFFNSLASYGNKAANPSAVIAPVTIPLSTAPHPTPSLQDMMNSYSSANPTGFEGS
NFDDPFSILNPKNENGGGNDDMTKDFLGLRPLSHSDIFNIAGLVKYTPNENQSQNHKTWQ
S*

Transcript Sequence

Transcript ID

PGSC0003DMT400006386
Transcript Infomation

pacid=37461387 locus=PGSC0003DMG400002495 ID=PGSC0003DMT400006386.v4.03 annot-version=v4.03
Sequence

ATGATGATGAAGGATTTAATGAATCAACAAGCTCAAGTACCTGTTGTTGTTATGGAGGAG
AACATGTCCAATTTAACTTCTGCATCTGGTGAAGCAAGTGTATCTTCTTCGAATCGAAAT
GATAATAATAATAATAATAATAATAATATTTATCCTCATCATCAGTATAACTTTGCTCCT
CCAAATCAACAAACTCAACCTGCACAACAAATCAAGAAGAAGAGAAATCAACCTGGGAAT
CCAGACCCAGAAGCTGAAGTGATAGCTTTGTCACCAAAGACACTAATGGCAACCAATAGA
TTTGTTTGTGAAATCTGTAACAAAGGATTTCAAAGAGATCAGAATCTGCAGCTTCACAGA
AGAGGACACAACTTACCATGGAAGCTCAAGCAAAGAACAAGCAAAGAAATAAGAAAAAAA
GTGTATGTTTGCCCAGAAACCAGCTGTGTTCATCATGACCCAGCAAGAGCTCTTGGAGAT
CTCACTGGAATCAAAAAACACTTTTGTAGAAAACATGGAGAGAAGAAGTGGAAATGTGAG
AAATGTTCAAAGCGTTATGCAGTTCAATCTGACTGGAAAGCTCACTCCAAAACTTGTGGT
ACCAAAGAGTATAGATGTGACTGTGGAACGCTTTTTTCAAGGAGGGATAGTTTCATAACT
CACAGAGCATTTTGCGATGCATTAGCGGAAGAAAGTGCAAGAGCGATAACAGGAAATCCA
ATTCTCCCATCTCAAGCTGGTTCTTCGACATCTCAAATGAATTTTCAGTTTCAACCATTT
AACCATGAAATTCCAGTTACATTTTCCTTGAAGAAAGAGCAACAAACTGGTTTCAATTTG
AGGCCTGAGATTCCGCCATGGCTATTGGTTGGAGGTGGTGGTGGTCCTGGACCTGGTCCT
CCACAACCACACCCTATTGACCTAAGTTCATCGATCTTTCAATCATCTAGGTTCAGTGAT
CAGGACTACACGCAGAGCCACCACCACCAACAAGGCGGCTTTATGAACCCTAACCCTAGT
CTATCCGGACCTACATCTGGAGCAATGGCCTCTCCACATATTTCTGCAACTGCGTTGTTG
CAGAAGGCAGCTCAGATGGGTGCGACCATGAGTAACAAAGCGAGTACTGTTTCTGCAGTT
TCATCAGGCCCAGGCCCAGCCATGCTGATGAGACCCCACCAAATTCACGTGTCTGCTACT
GCTACTGCTGCTGTGTCTGTTAGCAACACTACAGATTTTGGACTCAATTTGTCTTCACGT
GAAGACCTCACCACTGGTTTTTTCAATAGCTTGGCTTCATATGGGAATAAAGCTGCTAAT
CCCTCTGCTGTTATTGCTCCTGTTACAATCCCATTATCAACTGCACCTCATCCCACTCCT
TCTCTTCAGGATATGATGAATTCGTACTCATCCGCTAATCCTACAGGATTTGAAGGATCG
AATTTCGACGATCCATTTAGCATTTTGAATCCGAAAAACGAAAATGGCGGTGGTAACGAT
GATATGACCAAAGATTTCTTAGGCTTAAGACCTCTTTCTCATAGCGACATTTTCAACATA
GCTGGTCTAGTTAAGTACACTCCGAACGAAAATCAATCGCAAAATCACAAAACATGGCAA
AGTTAA