Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006347
CDS Infomation

pacid=37460404 polypeptide=PGSC0003DMP400004386 locus=PGSC0003DMG400002483 ID=PGSC0003DMT400006347.v4.03 annot-version=v4.03
Sequence

ATGTCGTTATTACGAAGAAGAAAAGCACCTGAAAATGAAATTCAATCGAATGTGGAGCCA
AAGCTTGATGCGGAAGAAGACGATAAGAAGAGTAAGAAGAAGAATGTAAAGTCTGGAAAG
AAGAAGAAATGGTCGTGTATCGATAATTGCTGTTGGTTCGTAGGATGCATATGTTGTGTG
TGGTGGATTTTGTTGTTTTTATACAATGCTATGCCGGCGTCGTTCCCGCAGTATGTGGCG
GAGGCGATTACAGGGCCGTTACCTGACCCGCCGGGTATCAAGTTGCAGAAGGAAGGGTTG
AAGGCTAAGCATCCGGTGGTTTTTATTCCTGGAATTGTCACGTGTGGACTTGAACTGTGG
GAAGGACATCAGTGTGCTGAAGGATTGTTTCGGAAGCGGCTTTGGGGCGGGACATTTGGA
GAAGTGTACAAAAGACCACTATGCTGGGTGAACCACATGACATTAGATAATGAAACTGGG
ATGGATCCTCCTGGTATTAGAGTTAGGCCAGTTAGTGGACTTGTTGCTGCAGATTACTTT
GCTCCAGGATACTTTGTCTGGGCAGTTTTGATTGCTAACTTGGCTCGAATAGGATACGAG
GAGAAAACCATGTATATGGCTGCATATGATTGGAGGCTTGCCTTTCAGAACACCGAGGTG
CGCGACCAGACCCTAAGCCGGATAAAAAGCAATATAGAACTGATGGTTGCAACCAGTGGC
AAGAAGGCAGTAATTGTTCCACATTCCATGGGGGTTGTATACTTTTTGCATTTTATGAAG
TGGGTGGAGGCACCAGCTCCTGTGGGTGGTGGTGGTGGACCCGATTGGTGCGCCAAGCAC
ATTAAAGCAGTGATGAATATTGGTGGGCCGTTGCTTGGTGTTCCAAAATCTATAGCTGGC
CTTTTCTCAGCTGAAGCACGGGATATTGCTGTTGCCAGGGCTCTGGCCCCAGGTGTTCTG
GACACGGATATATTCCATTTTCAAACATTAGAGCACATAATGAAGATGTCACGAACCTGG
GATGCAACCATGTCAATGATACCAAGAGGAGGGGACACGATCTGGGGCGGTCTTGACTGG
TCACCCGAGGAAGGCTATTCTCCTTGCAAAAGTAAGTCCAGAGACGATGCTGCTCAGAAT
TCAGGACATCACGAGAATCAAACTACAGATTCTAAAGCAAAATATTACAGTTATGGAAGG
ATGATGTCCTTTGGAAAAGATGCAACAGAGGCTCATCCATCAGATCTTAAGAGGATTGAC
TTTAGGGATGCTGTTAAGGGCAGTAATGTTGCAAATAACACCTGTGATGTGTGGAACGAG
TACCAAGACATGGGTGTTAGTGGTACTAAAGCAGTGGAAGAGTACAAGGTTTATACAGCT
GGAGAGATTGTGGATTTGCTCAACTTTGTTGCTCCGAAAATGATGGCCCGTGGTAATGCT
CATTTTTCATATGGGATAGCTGATGATTTGGATGATCCTAAGTATTCACACTACAAATAT
TGGTCAAATCCATTGGAGACAAAGTTACCAAATGCTCCTGACATGGAGATCTATTCAATG
TATGGAGTTGGCATTGAAACTGAAAGAGCATATGTTTACAAGCGGATACCTACAGCAGGA
TGCAATATTCCATTCCAGATTGATACTTCAGCTGATGATGGTGATGAAGGTAGCTGCTTG
AAATCTGGTGTTTACACGATAGATGGTGATGAGACTGTGCCTGCATTAAGTGCCGGATTC
ATGTGTGCAAAAGGATGGCGAGGAAGAACTAGATTTAATCCCTCTGGTATCAAAACTTAT
ATAAGGGAGTATTTTCATTCTCCCCCTGCAAACCTTCTCGAGGGTCGTGGTACACAGAGT
GGTGCACATGTTGATATAATGGGAAATTTCGCTTTGATAGAGGATATAATGAGAGTTGCT
GCTGGTGGTACAAGTGAAAACTTGGGAGGTGACCAAGTTTACTCAGATATCTTCAAGTGG
TCTGAGAAGATCAATTTACGTTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004386
PEP Infomation

pacid=37460404 transcript=PGSC0003DMT400006347 locus=PGSC0003DMG400002483 ID=PGSC0003DMT400006347.v4.03 annot-version=v4.03
Sequence

MSLLRRRKAPENEIQSNVEPKLDAEEDDKKSKKKNVKSGKKKKWSCIDNCCWFVGCICCV
WWILLFLYNAMPASFPQYVAEAITGPLPDPPGIKLQKEGLKAKHPVVFIPGIVTCGLELW
EGHQCAEGLFRKRLWGGTFGEVYKRPLCWVNHMTLDNETGMDPPGIRVRPVSGLVAADYF
APGYFVWAVLIANLARIGYEEKTMYMAAYDWRLAFQNTEVRDQTLSRIKSNIELMVATSG
KKAVIVPHSMGVVYFLHFMKWVEAPAPVGGGGGPDWCAKHIKAVMNIGGPLLGVPKSIAG
LFSAEARDIAVARALAPGVLDTDIFHFQTLEHIMKMSRTWDATMSMIPRGGDTIWGGLDW
SPEEGYSPCKSKSRDDAAQNSGHHENQTTDSKAKYYSYGRMMSFGKDATEAHPSDLKRID
FRDAVKGSNVANNTCDVWNEYQDMGVSGTKAVEEYKVYTAGEIVDLLNFVAPKMMARGNA
HFSYGIADDLDDPKYSHYKYWSNPLETKLPNAPDMEIYSMYGVGIETERAYVYKRIPTAG
CNIPFQIDTSADDGDEGSCLKSGVYTIDGDETVPALSAGFMCAKGWRGRTRFNPSGIKTY
IREYFHSPPANLLEGRGTQSGAHVDIMGNFALIEDIMRVAAGGTSENLGGDQVYSDIFKW
SEKINLRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400006347
Transcript Infomation

pacid=37460404 locus=PGSC0003DMG400002483 ID=PGSC0003DMT400006347.v4.03 annot-version=v4.03
Sequence

ATGTCGTTATTACGAAGAAGAAAAGCACCTGAAAATGAAATTCAATCGAATGTGGAGCCA
AAGCTTGATGCGGAAGAAGACGATAAGAAGAGTAAGAAGAAGAATGTAAAGTCTGGAAAG
AAGAAGAAATGGTCGTGTATCGATAATTGCTGTTGGTTCGTAGGATGCATATGTTGTGTG
TGGTGGATTTTGTTGTTTTTATACAATGCTATGCCGGCGTCGTTCCCGCAGTATGTGGCG
GAGGCGATTACAGGGCCGTTACCTGACCCGCCGGGTATCAAGTTGCAGAAGGAAGGGTTG
AAGGCTAAGCATCCGGTGGTTTTTATTCCTGGAATTGTCACGTGTGGACTTGAACTGTGG
GAAGGACATCAGTGTGCTGAAGGATTGTTTCGGAAGCGGCTTTGGGGCGGGACATTTGGA
GAAGTGTACAAAAGACCACTATGCTGGGTGAACCACATGACATTAGATAATGAAACTGGG
ATGGATCCTCCTGGTATTAGAGTTAGGCCAGTTAGTGGACTTGTTGCTGCAGATTACTTT
GCTCCAGGATACTTTGTCTGGGCAGTTTTGATTGCTAACTTGGCTCGAATAGGATACGAG
GAGAAAACCATGTATATGGCTGCATATGATTGGAGGCTTGCCTTTCAGAACACCGAGGTG
CGCGACCAGACCCTAAGCCGGATAAAAAGCAATATAGAACTGATGGTTGCAACCAGTGGC
AAGAAGGCAGTAATTGTTCCACATTCCATGGGGGTTGTATACTTTTTGCATTTTATGAAG
TGGGTGGAGGCACCAGCTCCTGTGGGTGGTGGTGGTGGACCCGATTGGTGCGCCAAGCAC
ATTAAAGCAGTGATGAATATTGGTGGGCCGTTGCTTGGTGTTCCAAAATCTATAGCTGGC
CTTTTCTCAGCTGAAGCACGGGATATTGCTGTTGCCAGGGCTCTGGCCCCAGGTGTTCTG
GACACGGATATATTCCATTTTCAAACATTAGAGCACATAATGAAGATGTCACGAACCTGG
GATGCAACCATGTCAATGATACCAAGAGGAGGGGACACGATCTGGGGCGGTCTTGACTGG
TCACCCGAGGAAGGCTATTCTCCTTGCAAAAGTAAGTCCAGAGACGATGCTGCTCAGAAT
TCAGGACATCACGAGAATCAAACTACAGATTCTAAAGCAAAATATTACAGTTATGGAAGG
ATGATGTCCTTTGGAAAAGATGCAACAGAGGCTCATCCATCAGATCTTAAGAGGATTGAC
TTTAGGGATGCTGTTAAGGGCAGTAATGTTGCAAATAACACCTGTGATGTGTGGAACGAG
TACCAAGACATGGGTGTTAGTGGTACTAAAGCAGTGGAAGAGTACAAGGTTTATACAGCT
GGAGAGATTGTGGATTTGCTCAACTTTGTTGCTCCGAAAATGATGGCCCGTGGTAATGCT
CATTTTTCATATGGGATAGCTGATGATTTGGATGATCCTAAGTATTCACACTACAAATAT
TGGTCAAATCCATTGGAGACAAAGTTACCAAATGCTCCTGACATGGAGATCTATTCAATG
TATGGAGTTGGCATTGAAACTGAAAGAGCATATGTTTACAAGCGGATACCTACAGCAGGA
TGCAATATTCCATTCCAGATTGATACTTCAGCTGATGATGGTGATGAAGGTAGCTGCTTG
AAATCTGGTGTTTACACGATAGATGGTGATGAGACTGTGCCTGCATTAAGTGCCGGATTC
ATGTGTGCAAAAGGATGGCGAGGAAGAACTAGATTTAATCCCTCTGGTATCAAAACTTAT
ATAAGGGAGTATTTTCATTCTCCCCCTGCAAACCTTCTCGAGGGTCGTGGTACACAGAGT
GGTGCACATGTTGATATAATGGGAAATTTCGCTTTGATAGAGGATATAATGAGAGTTGCT
GCTGGTGGTACAAGTGAAAACTTGGGAGGTGACCAAGTTTACTCAGATATCTTCAAGTGG
TCTGAGAAGATCAATTTACGTTTGTGA