Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006344
CDS Infomation

pacid=37462829 polypeptide=PGSC0003DMP400004383 locus=PGSC0003DMG400002481 ID=PGSC0003DMT400006344.v4.03 annot-version=v4.03
Sequence

ATGGAGGCAAGTGAACCCAAAATTGAGGATTGTGCTGTTCCGGTAACAAGCACAATCAGG
GCTTTGGAGAAGGAGATTGCTCATCCTATTGTTTACCAGCTTGTCCGGGTTGATGGCGAT
GGGAGATTAGTCCCGGCAACTCAGGATGAAATTATGGTGGTTGAGGACTTGCTTGAAGAT
GATAAGTGTGAATCCAAGCTTGTTCCAGATACCAGACAGATTTCAAAATCCTGCATAACT
GAAGGATACCTTCTTGAGAGAAATTCATTTCAAGTTACAGAAGAAAAGTCAAATGTGTTA
GTTGACCCAGTGCCCGACTTGGGAAAAATAGATGCTCCTGAAAAGGTGGCTGTTCATGGA
TTGGCTCCTCTCTCAGAACTCAGCAATGTTGATCAATCTGTGAGGACTGATGTATGCTCC
TATTCCCAGGATGCACCAAATGAGGATACACCATCAACTTCTGCTGCTGGTTCTAGTTGG
AAGCCAGACTTTTCAAAGTTGGAGGGAAAGATATGTTTAGATGACCTACCAGTTAAAGAA
CTTCAGGAAACTTTTAAAGCAACTTTTGGAAGGGAAACTTCCGTCAAGGATAAACAGTGG
CTTAAGAGGAGGATTACCATGGGTCTGACCAATTCATGTGATTTTTCATGCACTACTTTC
ATAATAAGAGATAATGTAGTGGTGAAAAAAGGTGAAGAACAAATATGTCATCGTGTAAAG
AGCAGAATTTCTGCAGATTCTGAAGATGGAGTGGCAAATTCAAACTCTAGAGGGTCATTA
AGTGATCATGATAACAGAATAAATGATGATGCTGATCTTTCTGGGGCAGATGTTTCCAGT
TCAGCCTTTGAAAGTTGTAATGTTACTAAAGATTTGAACACAGAGCAGATAACAGCCAAA
AGAGCTCGCAAACCAACAAAAAGATATATTGAAGAGCTTTCAGAAATAGAATCTAGGGAA
ACCAGTGAAAAGTTAGCATCACCAGATAAAATCTCCAGATACCAATTTGCATGTCCAGAA
ACTCATTTAAGGCCCACCAAAAATGTGAGGTCAAATGCGAGACCTCTGGTCACCAGGCAA
GATTCTCTGGGAGGTTCTGGGGTTCAAATTCCATTTGTTTCCCGGATTCGAAGGAGCCGT
CCGCGTGAGAACTTCATGCCTCTTTTGAAACTTCAGCCCAGTGGTATGGACATGGCGACC
AGACAAGTAAAGAGTGCTTTTGACATATCTGGGCCACAAGAAGATGATAAGAGAAATAAT
GACCTGATCAAGACCAGCTCATCTCCTGGATGGACTCAACAGCCTCTTATTGCTGCTTGT
GAAAAGGATGAGCATTACAGTGGGATGAAAATTGTTGAGCTAGAGAATGACATAGAGGTG
AATGACTGCTCTGAGGACAATTCAGATGATAATGTGGTGACTGTACCCACCCAAAAAGGA
GGAATGAGGAGAAAACATCATCGACCTTGGACTATCAATGAGGTTGTTAAGCTAGTGGAA
GGTGTAGCCAGGTATGGTGCTGGTAGATGGTCTGAGATAAAACGGCTTGCTTTTTCATCT
TGCCCTTATCGAACTTCGGTGGACCTGAAGGACAAGTGGAGAAATCTGCTGAAAGCTAGT
TTTGTGCAGTTGCCTGCAGAAAAAGGGATTCTGAATTCCCGGAAACAAGCTTCAGTTCCG
ATCCCTGCTGCAATTCTCTCGCGTGTGAGAGAGCTTGCTGATATGCAAGGTCAGATCCCA
CCAGTTCTCAGTGCATGCAAGTCAAGTGGACATAGTAGTAGTGATAGAAGTGTACATGAA
GCTAGGTCTGGATTCCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004383
PEP Infomation

pacid=37462829 transcript=PGSC0003DMT400006344 locus=PGSC0003DMG400002481 ID=PGSC0003DMT400006344.v4.03 annot-version=v4.03
Sequence

MEASEPKIEDCAVPVTSTIRALEKEIAHPIVYQLVRVDGDGRLVPATQDEIMVVEDLLED
DKCESKLVPDTRQISKSCITEGYLLERNSFQVTEEKSNVLVDPVPDLGKIDAPEKVAVHG
LAPLSELSNVDQSVRTDVCSYSQDAPNEDTPSTSAAGSSWKPDFSKLEGKICLDDLPVKE
LQETFKATFGRETSVKDKQWLKRRITMGLTNSCDFSCTTFIIRDNVVVKKGEEQICHRVK
SRISADSEDGVANSNSRGSLSDHDNRINDDADLSGADVSSSAFESCNVTKDLNTEQITAK
RARKPTKRYIEELSEIESRETSEKLASPDKISRYQFACPETHLRPTKNVRSNARPLVTRQ
DSLGGSGVQIPFVSRIRRSRPRENFMPLLKLQPSGMDMATRQVKSAFDISGPQEDDKRNN
DLIKTSSSPGWTQQPLIAACEKDEHYSGMKIVELENDIEVNDCSEDNSDDNVVTVPTQKG
GMRRKHHRPWTINEVVKLVEGVARYGAGRWSEIKRLAFSSCPYRTSVDLKDKWRNLLKAS
FVQLPAEKGILNSRKQASVPIPAAILSRVRELADMQGQIPPVLSACKSSGHSSSDRSVHE
ARSGFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400006344
Transcript Infomation

pacid=37462829 locus=PGSC0003DMG400002481 ID=PGSC0003DMT400006344.v4.03 annot-version=v4.03
Sequence

ATGGAGGCAAGTGAACCCAAAATTGAGGATTGTGCTGTTCCGGTAACAAGCACAATCAGG
GCTTTGGAGAAGGAGATTGCTCATCCTATTGTTTACCAGCTTGTCCGGGTTGATGGCGAT
GGGAGATTAGTCCCGGCAACTCAGGATGAAATTATGGTGGTTGAGGACTTGCTTGAAGAT
GATAAGTGTGAATCCAAGCTTGTTCCAGATACCAGACAGATTTCAAAATCCTGCATAACT
GAAGGATACCTTCTTGAGAGAAATTCATTTCAAGTTACAGAAGAAAAGTCAAATGTGTTA
GTTGACCCAGTGCCCGACTTGGGAAAAATAGATGCTCCTGAAAAGGTGGCTGTTCATGGA
TTGGCTCCTCTCTCAGAACTCAGCAATGTTGATCAATCTGTGAGGACTGATGTATGCTCC
TATTCCCAGGATGCACCAAATGAGGATACACCATCAACTTCTGCTGCTGGTTCTAGTTGG
AAGCCAGACTTTTCAAAGTTGGAGGGAAAGATATGTTTAGATGACCTACCAGTTAAAGAA
CTTCAGGAAACTTTTAAAGCAACTTTTGGAAGGGAAACTTCCGTCAAGGATAAACAGTGG
CTTAAGAGGAGGATTACCATGGGTCTGACCAATTCATGTGATTTTTCATGCACTACTTTC
ATAATAAGAGATAATGTAGTGGTGAAAAAAGGTGAAGAACAAATATGTCATCGTGTAAAG
AGCAGAATTTCTGCAGATTCTGAAGATGGAGTGGCAAATTCAAACTCTAGAGGGTCATTA
AGTGATCATGATAACAGAATAAATGATGATGCTGATCTTTCTGGGGCAGATGTTTCCAGT
TCAGCCTTTGAAAGTTGTAATGTTACTAAAGATTTGAACACAGAGCAGATAACAGCCAAA
AGAGCTCGCAAACCAACAAAAAGATATATTGAAGAGCTTTCAGAAATAGAATCTAGGGAA
ACCAGTGAAAAGTTAGCATCACCAGATAAAATCTCCAGATACCAATTTGCATGTCCAGAA
ACTCATTTAAGGCCCACCAAAAATGTGAGGTCAAATGCGAGACCTCTGGTCACCAGGCAA
GATTCTCTGGGAGGTTCTGGGGTTCAAATTCCATTTGTTTCCCGGATTCGAAGGAGCCGT
CCGCGTGAGAACTTCATGCCTCTTTTGAAACTTCAGCCCAGTGGTATGGACATGGCGACC
AGACAAGTAAAGAGTGCTTTTGACATATCTGGGCCACAAGAAGATGATAAGAGAAATAAT
GACCTGATCAAGACCAGCTCATCTCCTGGATGGACTCAACAGCCTCTTATTGCTGCTTGT
GAAAAGGATGAGCATTACAGTGGGATGAAAATTGTTGAGCTAGAGAATGACATAGAGGTG
AATGACTGCTCTGAGGACAATTCAGATGATAATGTGGTGACTGTACCCACCCAAAAAGGA
GGAATGAGGAGAAAACATCATCGACCTTGGACTATCAATGAGGTTGTTAAGCTAGTGGAA
GGTGTAGCCAGGTATGGTGCTGGTAGATGGTCTGAGATAAAACGGCTTGCTTTTTCATCT
TGCCCTTATCGAACTTCGGTGGACCTGAAGGACAAGTGGAGAAATCTGCTGAAAGCTAGT
TTTGTGCAGTTGCCTGCAGAAAAAGGGATTCTGAATTCCCGGAAACAAGCTTCAGTTCCG
ATCCCTGCTGCAATTCTCTCGCGTGTGAGAGAGCTTGCTGATATGCAAGGTCAGATCCCA
CCAGTTCTCAGTGCATGCAAGTCAAGTGGACATAGTAGTAGTGATAGAAGTGTACATGAA
GCTAGGTCTGGATTCCTGTAA