Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006281
CDS Infomation

pacid=37448042 polypeptide=PGSC0003DMP400004339 locus=PGSC0003DMG400002452 ID=PGSC0003DMT400006281.v4.03 annot-version=v4.03
Sequence

ATGGGGGGTAGTAGTTCATTTGTTGATGGAGTTCTTCGATGGTTTCATCGTCGTCACACT
AATGAAGATGCGATCTTGACTCAACCCCACAATTCTGCAGATACCCATTTACAAGAAAAA
CAAGAAAATAAACACGAATTTACTATTACTGAAGACTTTGACTTTACCGGTTTAAAGCTC
ATCAAAGTACCCAAGCGTTTTCATTTGCCTATTTCTTCTTCTTCCATGGATCCTATCAAA
AAGAATGCGTTAGAGACGGAATTCTTTACTGAATATGGAGAGGCAAGTAGATACCAAGTT
CAGGAAGTTATTGGCAAAGGAAGCTATGGAGTTGTGGGGTCTGCTGTTGATACCCATACT
GGTGAAAGAGTTGCAATCAAGAAAATTAATGATGTCTTTGACCATGTTTCTGATGCGACA
AGAATCTTGAGAGAAATCAAGCTTCTTCGGCTACTTAGGCATCCAGATATTGTAGAAATA
AAGCACATTATGTTGCCTCCTTCTCGAAGAGAGTTTAAAGATATTTATGTTGTTTTTGAA
TTGATGGAATCAGATCTCCATCAGGTAATTAAGGCCAATAATGATCTTACACATGAGCAT
TATCAGTTTTTCCTTTACCAGCTTCTGCGTGGACTAAAATATATTCATACAGCAAATATC
TTCCACCGGGATTTAAAGCCGAAAAATATCCTTGCTAATGCTGACTGTAAGTTGAAGATA
TGTGACTTTGGGCTTGCTCGTGTATCATTCAATGATGTGCCATCAGCTATTTTCTGGACT
GATTATGTTGCAACTCGATGGTATCGTGCTCCTGAGCTATGTGGCTCCTTCTTCTCTAAG
TATACTCCTGCTATTGATATATGGAGCATCGGATGCATATTTGCAGAGTTGCTTTCTGGA
AAACCATTATTTCCTGGAAAGAATGTGGTGCATCAATTAGACCTAATCACAGATTTGCTT
GGGACACCTCCTCCAGAAACAGTTGCAAAGATTAGAAATGAAAAGGCTAGAAGATACCTC
AGCAGCATGCGGAAGAAACAACCGGTTGGATTTGCAAAAAAGTTTCCAAATGCAGATCCT
TTGGCATTACGCCTACTTGAACGACTGCTTGCATTTGACCCTAAAGATCGGCCATCAGCA
GAAGAGGGATTAGAGGATCCTTATTTCCATGGTTTATCAAATGCTGATCGTGAACCATGT
AGACCACCAATATCAAAGCTTGAGTTTGAATTTGAGAAGAGGAAATTGGCAAAAGATGAT
GTTAGAGAACTCATATATCGCGAGATTTTAGAATATCATCCTCAGATGCTTCAGGAGTAT
CTTTCTGGTGGAGATCAGACTAGTGGCTTTATGTACCCAAGTGGTGTTGATCGGTTCAAG
CGACAATTTGCACATCTTGAGGAGCATGCTGGTAAAGGTGAACATAGTGCTCCGATTCTG
AGGCAGCATGCTTCCTTGCCTAGAGAGCGAGTTCCTGCACCAAAAGATGACACCTCTTCC
CAAAATAATGATTGTGAAAAGAGAACTGTTTCAACAACTCTTCAGAGTCCACCAGCGCAG
TCTGAGGGATCAGAGAACTACAGTGCTCGTAGCTTGCTGAAGAGTGCTAGCATCAGTGGT
TCCAAGTGTGTGGAAGTTAAAAGAAGAAACGCAGAGGAAGAGCCAATCGAAGAACAAAAC
GAAGAAGTTGATGGTTTGTCTCAAGAAGTTGCTTCTCTTCATGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004339
PEP Infomation

pacid=37448042 transcript=PGSC0003DMT400006281 locus=PGSC0003DMG400002452 ID=PGSC0003DMT400006281.v4.03 annot-version=v4.03
Sequence

MGGSSSFVDGVLRWFHRRHTNEDAILTQPHNSADTHLQEKQENKHEFTITEDFDFTGLKL
IKVPKRFHLPISSSSMDPIKKNALETEFFTEYGEASRYQVQEVIGKGSYGVVGSAVDTHT
GERVAIKKINDVFDHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE
LMESDLHQVIKANNDLTHEHYQFFLYQLLRGLKYIHTANIFHRDLKPKNILANADCKLKI
CDFGLARVSFNDVPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLSG
KPLFPGKNVVHQLDLITDLLGTPPPETVAKIRNEKARRYLSSMRKKQPVGFAKKFPNADP
LALRLLERLLAFDPKDRPSAEEGLEDPYFHGLSNADREPCRPPISKLEFEFEKRKLAKDD
VRELIYREILEYHPQMLQEYLSGGDQTSGFMYPSGVDRFKRQFAHLEEHAGKGEHSAPIL
RQHASLPRERVPAPKDDTSSQNNDCEKRTVSTTLQSPPAQSEGSENYSARSLLKSASISG
SKCVEVKRRNAEEEPIEEQNEEVDGLSQEVASLHV*

Transcript Sequence

Transcript ID

PGSC0003DMT400006281
Transcript Infomation

pacid=37448042 locus=PGSC0003DMG400002452 ID=PGSC0003DMT400006281.v4.03 annot-version=v4.03
Sequence

ATGGGGGGTAGTAGTTCATTTGTTGATGGAGTTCTTCGATGGTTTCATCGTCGTCACACT
AATGAAGATGCGATCTTGACTCAACCCCACAATTCTGCAGATACCCATTTACAAGAAAAA
CAAGAAAATAAACACGAATTTACTATTACTGAAGACTTTGACTTTACCGGTTTAAAGCTC
ATCAAAGTACCCAAGCGTTTTCATTTGCCTATTTCTTCTTCTTCCATGGATCCTATCAAA
AAGAATGCGTTAGAGACGGAATTCTTTACTGAATATGGAGAGGCAAGTAGATACCAAGTT
CAGGAAGTTATTGGCAAAGGAAGCTATGGAGTTGTGGGGTCTGCTGTTGATACCCATACT
GGTGAAAGAGTTGCAATCAAGAAAATTAATGATGTCTTTGACCATGTTTCTGATGCGACA
AGAATCTTGAGAGAAATCAAGCTTCTTCGGCTACTTAGGCATCCAGATATTGTAGAAATA
AAGCACATTATGTTGCCTCCTTCTCGAAGAGAGTTTAAAGATATTTATGTTGTTTTTGAA
TTGATGGAATCAGATCTCCATCAGGTAATTAAGGCCAATAATGATCTTACACATGAGCAT
TATCAGTTTTTCCTTTACCAGCTTCTGCGTGGACTAAAATATATTCATACAGCAAATATC
TTCCACCGGGATTTAAAGCCGAAAAATATCCTTGCTAATGCTGACTGTAAGTTGAAGATA
TGTGACTTTGGGCTTGCTCGTGTATCATTCAATGATGTGCCATCAGCTATTTTCTGGACT
GATTATGTTGCAACTCGATGGTATCGTGCTCCTGAGCTATGTGGCTCCTTCTTCTCTAAG
TATACTCCTGCTATTGATATATGGAGCATCGGATGCATATTTGCAGAGTTGCTTTCTGGA
AAACCATTATTTCCTGGAAAGAATGTGGTGCATCAATTAGACCTAATCACAGATTTGCTT
GGGACACCTCCTCCAGAAACAGTTGCAAAGATTAGAAATGAAAAGGCTAGAAGATACCTC
AGCAGCATGCGGAAGAAACAACCGGTTGGATTTGCAAAAAAGTTTCCAAATGCAGATCCT
TTGGCATTACGCCTACTTGAACGACTGCTTGCATTTGACCCTAAAGATCGGCCATCAGCA
GAAGAGGGATTAGAGGATCCTTATTTCCATGGTTTATCAAATGCTGATCGTGAACCATGT
AGACCACCAATATCAAAGCTTGAGTTTGAATTTGAGAAGAGGAAATTGGCAAAAGATGAT
GTTAGAGAACTCATATATCGCGAGATTTTAGAATATCATCCTCAGATGCTTCAGGAGTAT
CTTTCTGGTGGAGATCAGACTAGTGGCTTTATGTACCCAAGTGGTGTTGATCGGTTCAAG
CGACAATTTGCACATCTTGAGGAGCATGCTGGTAAAGGTGAACATAGTGCTCCGATTCTG
AGGCAGCATGCTTCCTTGCCTAGAGAGCGAGTTCCTGCACCAAAAGATGACACCTCTTCC
CAAAATAATGATTGTGAAAAGAGAACTGTTTCAACAACTCTTCAGAGTCCACCAGCGCAG
TCTGAGGGATCAGAGAACTACAGTGCTCGTAGCTTGCTGAAGAGTGCTAGCATCAGTGGT
TCCAAGTGTGTGGAAGTTAAAAGAAGAAACGCAGAGGAAGAGCCAATCGAAGAACAAAAC
GAAGAAGTTGATGGTTTGTCTCAAGAAGTTGCTTCTCTTCATGTTTAA