Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006173
CDS Infomation

pacid=37476568 polypeptide=PGSC0003DMP400004277 locus=PGSC0003DMG400002400 ID=PGSC0003DMT400006173.v4.03 annot-version=v4.03
Sequence

ATGTGGGAATCAGAAAGTGAGTCTGTTAGTGGAAGAGACTATGGAAATGGAGTTCTCAGC
AACACCAAACATGGGGTCAAGACTGATGGTTTTGAGCAAAAAGGACAGTCTTGGTATGTA
GAAACTGATATTCCCAGTGACCTTTTAGTTCAAATTGGAGATGTGAGTTTTCACTTACAT
AAGTATCCTTTGCTTTCTAGAAGTGGAAAGATGAACAGAATCATATATGAAGCAAGGGAT
GAAGAATTGAGCAGAATAGCTTTAAATGACTTACCAGGTGGATGGGATGCATTTGAGTTA
GCTGCAAAATTCTGTTATGGAATTGCTGTTGATCTCACAGCAACCAATATCTCCGGTTTA
CGATGTGCAGCAGAGTACTTAGAAATGACTGAGGACTTAGAAGAGGGCAATCTAATATTC
AAGACTGAAGCTTTTCTCAGTTATGTTGTTTTATCATCATGGAGGGACTCCATACTGGTG
TTGAAGAGTTGTGAAAGGTTATCACCATGGGCTGAAAACCTTCAAATTGTTCGAAGATGC
AGCGAGTCAATTGCATGGAAAGCGTGTGCCAATCCGAAAGGAATAAAATGGCAATACACT
GGCAGACTCCCTACTAGTGTTTCCAGCCCTAAATGGAATGAAATGAAGGATTCCAGTCCG
AGCAGAAATAACCAGCAATTAGTACCCCCTGATTGGTGGTTCGAAGATGTCTCTATTCTC
AGGATTGATCACTTTGTCAGAGTGATTACTGCTATTAAGGTGAAGGGCATGAGACATGAA
CTGATTGGTGCTGTTCTTATGCACTATGCTACTAAATGGATCCCGGGGCTAATTAAAGAA
GGAGCGGGATCGTTGGATGATTGTAACAATAGCAGTATTAGTAATAGCAGTAGCAGCAGT
AGTTGGAAAGGAGGTCTTCATATGATAGTCTCAGGATCTAGAGATGAAGTACCACCAACT
GTTCAGGCCAAAGATCAGAGGATGATTATTGAAAGCCTAATTAGCATAATCCCACAACAG
AAGGACAGCGTCTCGTGTAGCTTCCTTCTACGTCTTTTGAGAATGGCAAACTTGCTGAAA
GTGGCTCCTGCACTTGTAACAGAATTGGAGAAACGAGTCGGGATGCAATTTGAGCAGGCA
ATGTTAGCTGATCTACTTATACCGTCCTACAATAAAAGTGAGACATTGTATGATGTTGAT
CTTGTTCAGAGGCTTTTGGAACATTTCTTAGTTCAAGAGCAAACAGAAAGTTCAAGCCCT
AGTAGAAGTTCATTCTCTGAGAAGCATATGCATGATGCAAATCAAAGGGGTACTAATCTC
AACGCCAAGATGAGAGTCGCAAAGCTTGTAGACAGTTATCTCACAGAAGTATCCAGAGAT
CGAAATCTTTCCTTGACAAAATTTCAGGTCTTGGCTGAGGCTTTGCCAGAATCAGCAAGA
ACTTGTGATGATGGATTGTATCGTGCAATTGATTCGTATCTCAAGGCCCATCCAACTCTG
TCAGAACATGAAAGAAAGCGGCTCTGCAGGGTGATGGATTGCCAAAAACTGTCTATTGAT
GCTTGCATGCACGCTGCTCAGAACGAAAGGCTTCCACTACGAGTAGTGGTGCAAGTCCTC
TTTTCTGAGCAGGTAAAGATCAGCAATGCAATATCCAGCAGCTCACTGAAAGATGCAGGA
GAATCTCATTATCAACCCCTAGTATCAAACCGCAAAACATTGCTCGAAGCAACACCACAA
TCATTTCAAGAGGGATGGACTACAGCCAAAAAAGACATCAACACTCTTAAGTTTGAACTC
GATAGTGTGAAAGCTAAGTATCTACAACTACAAAATGACATGGAGAACTTGCAAAAACAG
TTTGATAAGATCACAAAACCAAAGCAAGGATCGGGTTGGACTGCAGGGTGGAAAAAGTTA
AGCAAGCTCACAAAGATGACACATTTAGAATCGCAAGAAAACAGTCCACACGCCCCAAAT
GCAGAACCGACAAGGAAGACCCCAAGAAGATGGAGAAATTCCATTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004277
PEP Infomation

pacid=37476568 transcript=PGSC0003DMT400006173 locus=PGSC0003DMG400002400 ID=PGSC0003DMT400006173.v4.03 annot-version=v4.03
Sequence

MWESESESVSGRDYGNGVLSNTKHGVKTDGFEQKGQSWYVETDIPSDLLVQIGDVSFHLH
KYPLLSRSGKMNRIIYEARDEELSRIALNDLPGGWDAFELAAKFCYGIAVDLTATNISGL
RCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCERLSPWAENLQIVRRC
SESIAWKACANPKGIKWQYTGRLPTSVSSPKWNEMKDSSPSRNNQQLVPPDWWFEDVSIL
RIDHFVRVITAIKVKGMRHELIGAVLMHYATKWIPGLIKEGAGSLDDCNNSSISNSSSSS
SWKGGLHMIVSGSRDEVPPTVQAKDQRMIIESLISIIPQQKDSVSCSFLLRLLRMANLLK
VAPALVTELEKRVGMQFEQAMLADLLIPSYNKSETLYDVDLVQRLLEHFLVQEQTESSSP
SRSSFSEKHMHDANQRGTNLNAKMRVAKLVDSYLTEVSRDRNLSLTKFQVLAEALPESAR
TCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSIDACMHAAQNERLPLRVVVQVL
FSEQVKISNAISSSSLKDAGESHYQPLVSNRKTLLEATPQSFQEGWTTAKKDINTLKFEL
DSVKAKYLQLQNDMENLQKQFDKITKPKQGSGWTAGWKKLSKLTKMTHLESQENSPHAPN
AEPTRKTPRRWRNSIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400006173
Transcript Infomation

pacid=37476568 locus=PGSC0003DMG400002400 ID=PGSC0003DMT400006173.v4.03 annot-version=v4.03
Sequence

ATGTGGGAATCAGAAAGTGAGTCTGTTAGTGGAAGAGACTATGGAAATGGAGTTCTCAGC
AACACCAAACATGGGGTCAAGACTGATGGTTTTGAGCAAAAAGGACAGTCTTGGTATGTA
GAAACTGATATTCCCAGTGACCTTTTAGTTCAAATTGGAGATGTGAGTTTTCACTTACAT
AAGTATCCTTTGCTTTCTAGAAGTGGAAAGATGAACAGAATCATATATGAAGCAAGGGAT
GAAGAATTGAGCAGAATAGCTTTAAATGACTTACCAGGTGGATGGGATGCATTTGAGTTA
GCTGCAAAATTCTGTTATGGAATTGCTGTTGATCTCACAGCAACCAATATCTCCGGTTTA
CGATGTGCAGCAGAGTACTTAGAAATGACTGAGGACTTAGAAGAGGGCAATCTAATATTC
AAGACTGAAGCTTTTCTCAGTTATGTTGTTTTATCATCATGGAGGGACTCCATACTGGTG
TTGAAGAGTTGTGAAAGGTTATCACCATGGGCTGAAAACCTTCAAATTGTTCGAAGATGC
AGCGAGTCAATTGCATGGAAAGCGTGTGCCAATCCGAAAGGAATAAAATGGCAATACACT
GGCAGACTCCCTACTAGTGTTTCCAGCCCTAAATGGAATGAAATGAAGGATTCCAGTCCG
AGCAGAAATAACCAGCAATTAGTACCCCCTGATTGGTGGTTCGAAGATGTCTCTATTCTC
AGGATTGATCACTTTGTCAGAGTGATTACTGCTATTAAGGTGAAGGGCATGAGACATGAA
CTGATTGGTGCTGTTCTTATGCACTATGCTACTAAATGGATCCCGGGGCTAATTAAAGAA
GGAGCGGGATCGTTGGATGATTGTAACAATAGCAGTATTAGTAATAGCAGTAGCAGCAGT
AGTTGGAAAGGAGGTCTTCATATGATAGTCTCAGGATCTAGAGATGAAGTACCACCAACT
GTTCAGGCCAAAGATCAGAGGATGATTATTGAAAGCCTAATTAGCATAATCCCACAACAG
AAGGACAGCGTCTCGTGTAGCTTCCTTCTACGTCTTTTGAGAATGGCAAACTTGCTGAAA
GTGGCTCCTGCACTTGTAACAGAATTGGAGAAACGAGTCGGGATGCAATTTGAGCAGGCA
ATGTTAGCTGATCTACTTATACCGTCCTACAATAAAAGTGAGACATTGTATGATGTTGAT
CTTGTTCAGAGGCTTTTGGAACATTTCTTAGTTCAAGAGCAAACAGAAAGTTCAAGCCCT
AGTAGAAGTTCATTCTCTGAGAAGCATATGCATGATGCAAATCAAAGGGGTACTAATCTC
AACGCCAAGATGAGAGTCGCAAAGCTTGTAGACAGTTATCTCACAGAAGTATCCAGAGAT
CGAAATCTTTCCTTGACAAAATTTCAGGTCTTGGCTGAGGCTTTGCCAGAATCAGCAAGA
ACTTGTGATGATGGATTGTATCGTGCAATTGATTCGTATCTCAAGGCCCATCCAACTCTG
TCAGAACATGAAAGAAAGCGGCTCTGCAGGGTGATGGATTGCCAAAAACTGTCTATTGAT
GCTTGCATGCACGCTGCTCAGAACGAAAGGCTTCCACTACGAGTAGTGGTGCAAGTCCTC
TTTTCTGAGCAGGTAAAGATCAGCAATGCAATATCCAGCAGCTCACTGAAAGATGCAGGA
GAATCTCATTATCAACCCCTAGTATCAAACCGCAAAACATTGCTCGAAGCAACACCACAA
TCATTTCAAGAGGGATGGACTACAGCCAAAAAAGACATCAACACTCTTAAGTTTGAACTC
GATAGTGTGAAAGCTAAGTATCTACAACTACAAAATGACATGGAGAACTTGCAAAAACAG
TTTGATAAGATCACAAAACCAAAGCAAGGATCGGGTTGGACTGCAGGGTGGAAAAAGTTA
AGCAAGCTCACAAAGATGACACATTTAGAATCGCAAGAAAACAGTCCACACGCCCCAAAT
GCAGAACCGACAAGGAAGACCCCAAGAAGATGGAGAAATTCCATTTCCTGA