Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006154
CDS Infomation

pacid=37434459 polypeptide=PGSC0003DMP400004265 locus=PGSC0003DMG401002393 ID=PGSC0003DMT400006154.v4.03 annot-version=v4.03
Sequence

ATGGAGTTAAACCTTAACAAGAAGAAAAAGCAAAAGACTGAGAACAGCTCAACCGGCAAT
TCTGAGGTTTTCGCTTCTTGCTCTTTCGAAAGTCTCGGTCTTCACACTACCTTATGCGAA
CAGCTCAAAGAGAGGCTTGGATTCGAGGCTCCAACTCTTGTTCAAGCTCAAGCAATTCCT
GTTATACTCTCTGGTCGACATGTGCTAGTGAATGCGGCTACCGGAACGGGGAAAACTGTG
GCTTATTTGGCTCCAGTTATTCATCAGTTGCAGAAGTGTGATCCCAGGATTCAGCGGTCT
GATGGTACTTTTGCGTTGGTTCTTGTGCCAACGCATGAATTATGCATGCAGGTATATGAG
ATCTTGCAAAAGTTGTTGCATCGTTTTCACTGGATTGTTCCTGGATATATTATGGGAGGG
GAAAGCAGGAACAAAGAGAAAGCTAGATTGCGAAAAGGTATATCTATTCTTGTTGCAACT
CCTGGACGTCTTTTGGATCACCTAAAAAACACATCATCATTCTCGTACACAAACCTGCGC
TGGATAATTTTTGATGAAGCAGACAGAATTCTGGAGCTTGGATATGGTAAAGAGATTGAA
GACATACTTAATATTCTGGGCTCAAAACAACAAAAATCTGTTGGCAAGGGTAACACAACT
TCACAGATTTCTGAGGTTCAGAGGCAAAATGTGTTGTTATCTGCTACATTAAATGAGAAA
GTAAATCATCTCGCGGAAATTAGTTTAGATAACCCAGTGATGGTTGGGCTTGACAAGAAA
ATAGAGCTACAATTAACTCATCAAGACTCCAAACCAATGGAATTTAATGGGAATGATATA
TTAGAAAAAGATGGCAAACCACTGAGCTCTTCAACTGAAGAATATAAACTTCCAGCTCAG
TTACTTCAGAGATATATTAAAGTCCCCTGTGGTTCACGGCTTGTAGTGCTTCTTGCAATT
CTAAAACATCTGTTTGAGAAGGAACCTTCCCAGAAGGTTGTGGTGTTCTTTTCAACATGT
GATGCTGTAGATTTTCATTATTCATTGGTGAGTGGATTTCAGTGGCTCTCTCGTCAGCAA
TCAGATACAGATGTCAAACAACTGTTTCTGAAATGCAACACACTTCGGTTACATGGGAAT
ATGAATCACGAAGACAGAAGAACTACATTCCATGCTTTTAAAACAGAAAAATCAGCACTT
CTGCTATCCACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAGGTGTATTATA
CAGTATGATCCTCCAGGAGAGGCAACTGAATATGTGCATCGGGTAGGAAGAACCGCTCGT
ATCGGTGAAAAGGGAGATTCTTTATTGTTCCTACAGCCAGTTGAAACTGATTACTTGCCT
GGCTTAGAGAAACACGGGGTGATGCTAACAGAGTATCCCCTTCAGAAACTTTTGGATAGC
TTTCCATTGTTTGGTATGAGGTACCACCCGAAGAATTTTGTTTCAGTAGACACACATCCC
TGGGTTGTTTCTCTGCAGAAAGCATTGGAATCCTTTACTTCATCAGAGTTAAAGATGAAG
AAAATGGCGCAGAATGCATTTTGCTCATGGGTTCGTGCTTACACTGCCCATCGTGGTGAA
CTTAAAGGAATTTTTATGGTGAAGAAACTTCACTTGGGGCATGTGGCAAGAAGTTTTGCA
TTGAAGGAGCAGCCATCTTTGGTTAATAAATCCCTCCAAAAACAAACAAAGAAAAGGATG
AGAGACCAGAAACAGAAAAACGTATCAAAAAAGAGGAAAGTCGGAAAAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400004265
PEP Infomation

pacid=37434459 transcript=PGSC0003DMT400006154 locus=PGSC0003DMG401002393 ID=PGSC0003DMT400006154.v4.03 annot-version=v4.03
Sequence

MELNLNKKKKQKTENSSTGNSEVFASCSFESLGLHTTLCEQLKERLGFEAPTLVQAQAIP
VILSGRHVLVNAATGTGKTVAYLAPVIHQLQKCDPRIQRSDGTFALVLVPTHELCMQVYE
ILQKLLHRFHWIVPGYIMGGESRNKEKARLRKGISILVATPGRLLDHLKNTSSFSYTNLR
WIIFDEADRILELGYGKEIEDILNILGSKQQKSVGKGNTTSQISEVQRQNVLLSATLNEK
VNHLAEISLDNPVMVGLDKKIELQLTHQDSKPMEFNGNDILEKDGKPLSSSTEEYKLPAQ
LLQRYIKVPCGSRLVVLLAILKHLFEKEPSQKVVVFFSTCDAVDFHYSLVSGFQWLSRQQ
SDTDVKQLFLKCNTLRLHGNMNHEDRRTTFHAFKTEKSALLLSTDVAARGLDFPKVRCII
QYDPPGEATEYVHRVGRTARIGEKGDSLLFLQPVETDYLPGLEKHGVMLTEYPLQKLLDS
FPLFGMRYHPKNFVSVDTHPWVVSLQKALESFTSSELKMKKMAQNAFCSWVRAYTAHRGE
LKGIFMVKKLHLGHVARSFALKEQPSLVNKSLQKQTKKRMRDQKQKNVSKKRKVGKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400006154
Transcript Infomation

pacid=37434459 locus=PGSC0003DMG401002393 ID=PGSC0003DMT400006154.v4.03 annot-version=v4.03
Sequence

ATGGAGTTAAACCTTAACAAGAAGAAAAAGCAAAAGACTGAGAACAGCTCAACCGGCAAT
TCTGAGGTTTTCGCTTCTTGCTCTTTCGAAAGTCTCGGTCTTCACACTACCTTATGCGAA
CAGCTCAAAGAGAGGCTTGGATTCGAGGCTCCAACTCTTGTTCAAGCTCAAGCAATTCCT
GTTATACTCTCTGGTCGACATGTGCTAGTGAATGCGGCTACCGGAACGGGGAAAACTGTG
GCTTATTTGGCTCCAGTTATTCATCAGTTGCAGAAGTGTGATCCCAGGATTCAGCGGTCT
GATGGTACTTTTGCGTTGGTTCTTGTGCCAACGCATGAATTATGCATGCAGGTATATGAG
ATCTTGCAAAAGTTGTTGCATCGTTTTCACTGGATTGTTCCTGGATATATTATGGGAGGG
GAAAGCAGGAACAAAGAGAAAGCTAGATTGCGAAAAGGTATATCTATTCTTGTTGCAACT
CCTGGACGTCTTTTGGATCACCTAAAAAACACATCATCATTCTCGTACACAAACCTGCGC
TGGATAATTTTTGATGAAGCAGACAGAATTCTGGAGCTTGGATATGGTAAAGAGATTGAA
GACATACTTAATATTCTGGGCTCAAAACAACAAAAATCTGTTGGCAAGGGTAACACAACT
TCACAGATTTCTGAGGTTCAGAGGCAAAATGTGTTGTTATCTGCTACATTAAATGAGAAA
GTAAATCATCTCGCGGAAATTAGTTTAGATAACCCAGTGATGGTTGGGCTTGACAAGAAA
ATAGAGCTACAATTAACTCATCAAGACTCCAAACCAATGGAATTTAATGGGAATGATATA
TTAGAAAAAGATGGCAAACCACTGAGCTCTTCAACTGAAGAATATAAACTTCCAGCTCAG
TTACTTCAGAGATATATTAAAGTCCCCTGTGGTTCACGGCTTGTAGTGCTTCTTGCAATT
CTAAAACATCTGTTTGAGAAGGAACCTTCCCAGAAGGTTGTGGTGTTCTTTTCAACATGT
GATGCTGTAGATTTTCATTATTCATTGGTGAGTGGATTTCAGTGGCTCTCTCGTCAGCAA
TCAGATACAGATGTCAAACAACTGTTTCTGAAATGCAACACACTTCGGTTACATGGGAAT
ATGAATCACGAAGACAGAAGAACTACATTCCATGCTTTTAAAACAGAAAAATCAGCACTT
CTGCTATCCACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAGGTGTATTATA
CAGTATGATCCTCCAGGAGAGGCAACTGAATATGTGCATCGGGTAGGAAGAACCGCTCGT
ATCGGTGAAAAGGGAGATTCTTTATTGTTCCTACAGCCAGTTGAAACTGATTACTTGCCT
GGCTTAGAGAAACACGGGGTGATGCTAACAGAGTATCCCCTTCAGAAACTTTTGGATAGC
TTTCCATTGTTTGGTATGAGGTACCACCCGAAGAATTTTGTTTCAGTAGACACACATCCC
TGGGTTGTTTCTCTGCAGAAAGCATTGGAATCCTTTACTTCATCAGAGTTAAAGATGAAG
AAAATGGCGCAGAATGCATTTTGCTCATGGGTTCGTGCTTACACTGCCCATCGTGGTGAA
CTTAAAGGAATTTTTATGGTGAAGAAACTTCACTTGGGGCATGTGGCAAGAAGTTTTGCA
TTGAAGGAGCAGCCATCTTTGGTTAATAAATCCCTCCAAAAACAAACAAAGAAAAGGATG
AGAGACCAGAAACAGAAAAACGTATCAAAAAAGAGGAAAGTCGGAAAAAGATGA