Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006140
CDS Infomation

pacid=37431441 polypeptide=PGSC0003DMP400004255 locus=PGSC0003DMG400002389 ID=PGSC0003DMT400006140.v4.03 annot-version=v4.03
Sequence

ATGGCGACCACTCAGCTAACAGCTTCGTCTATCTCTGGCAATGGTTTTGCATCCTTTGAA
GGGCTCAGGTCCACTTGCATTGTAAAGGCCGTATCTTTTACCCCTTTGAAGCACAACAAC
AGCAGGTCTTTTAGTCGTCTGGTTGTCAAGGCTGCCACCACCGTAGCTCCTAAGTACACT
ACTCTTAAGCCTTTGGGCGACAGAGTGTTGGTGAAGATTAAGACCGCGGAGGAGAAAACT
GTTGGTGGTATCCTACTTCCAGTAACAGCCCAGTCGAAACCTAATGGAGGTGAGGTGGTT
GCTGTTGGGGAGGGTCATTCAGCTGGCAAGATCAAAGTGGACATTAGTGTGAAGACTGGT
GCCCAAGTCATCTACTCAAAGTACGCGGGAACTGAGGTGGAGTTTGATGGATCAAAGCAC
CTCATTCTGAAAGAGGATGATATTGTTGGTATTCTTGAGACAGATGATGTCAAGGATCTG
CAGCCATTAAATGACAGAGTCCTAATCAAGGTTGCCGAAGCTGAAGAAAAAACTGCTGGA
GGCTTACTGTTGACTGAGGCAGCCAAGGAGAAGCCTTCAATTGGCTCGATTATAGCCGTC
GGGCCTGGTCCTATTGATGAAGAAGGGAACAGGAAACCACTTTCAGTATCCCCAGGAAAT
ACAGTTCTCTACTCCAAATATGCAGGCAGTGAATTCAAAGGGGCTGATGGTTCTGATTAC
ATCACACTCAGGGTGTCTGATGTAATGGCTGTGCTATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004255
PEP Infomation

pacid=37431441 transcript=PGSC0003DMT400006140 locus=PGSC0003DMG400002389 ID=PGSC0003DMT400006140.v4.03 annot-version=v4.03
Sequence

MATTQLTASSISGNGFASFEGLRSTCIVKAVSFTPLKHNNSRSFSRLVVKAATTVAPKYT
TLKPLGDRVLVKIKTAEEKTVGGILLPVTAQSKPNGGEVVAVGEGHSAGKIKVDISVKTG
AQVIYSKYAGTEVEFDGSKHLILKEDDIVGILETDDVKDLQPLNDRVLIKVAEAEEKTAG
GLLLTEAAKEKPSIGSIIAVGPGPIDEEGNRKPLSVSPGNTVLYSKYAGSEFKGADGSDY
ITLRVSDVMAVLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400006140
Transcript Infomation

pacid=37431441 locus=PGSC0003DMG400002389 ID=PGSC0003DMT400006140.v4.03 annot-version=v4.03
Sequence

ATGGCGACCACTCAGCTAACAGCTTCGTCTATCTCTGGCAATGGTTTTGCATCCTTTGAA
GGGCTCAGGTCCACTTGCATTGTAAAGGCCGTATCTTTTACCCCTTTGAAGCACAACAAC
AGCAGGTCTTTTAGTCGTCTGGTTGTCAAGGCTGCCACCACCGTAGCTCCTAAGTACACT
ACTCTTAAGCCTTTGGGCGACAGAGTGTTGGTGAAGATTAAGACCGCGGAGGAGAAAACT
GTTGGTGGTATCCTACTTCCAGTAACAGCCCAGTCGAAACCTAATGGAGGTGAGGTGGTT
GCTGTTGGGGAGGGTCATTCAGCTGGCAAGATCAAAGTGGACATTAGTGTGAAGACTGGT
GCCCAAGTCATCTACTCAAAGTACGCGGGAACTGAGGTGGAGTTTGATGGATCAAAGCAC
CTCATTCTGAAAGAGGATGATATTGTTGGTATTCTTGAGACAGATGATGTCAAGGATCTG
CAGCCATTAAATGACAGAGTCCTAATCAAGGTTGCCGAAGCTGAAGAAAAAACTGCTGGA
GGCTTACTGTTGACTGAGGCAGCCAAGGAGAAGCCTTCAATTGGCTCGATTATAGCCGTC
GGGCCTGGTCCTATTGATGAAGAAGGGAACAGGAAACCACTTTCAGTATCCCCAGGAAAT
ACAGTTCTCTACTCCAAATATGCAGGCAGTGAATTCAAAGGGGCTGATGGTTCTGATTAC
ATCACACTCAGGGTGTCTGATGTAATGGCTGTGCTATCTTAG