Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006139
CDS Infomation

pacid=37473302 polypeptide=PGSC0003DMP400004254 locus=PGSC0003DMG400002388 ID=PGSC0003DMT400006139.v4.03 annot-version=v4.03
Sequence

ATGGCTGGGGGAAGTTACTCCCATTCTGGTGGGAGGAAATCATCTGATTTCTGTTCAAAA
CTCACTGTTGTGACTTTTCTCGGAATTTCTTGCGTTGGGATATGGATGTTGATATCATCA
TCATTCAGTATAACTCTTCAAAATTCAGAGATATCTTCGACGAATCTTTTGGGGCAGTAT
TCAGGCAATACTGATGATTTTCTAGTCAATGCAAAGAGAGGAGAAGATGAAACATTCCAG
GGAGAAAAACGGTTCAGAAGGGGAAGGTCTTTAGAGGAGATTGGAGATGAAAAGGGGCTG
GATAGTTTCCAAAATGAGGAAAGGGAAGGAGAAAGCTCTAATTTAAGAAATGAAGAAGAA
AATCAAGAAAATTCTGAATCCAGTTCATCAGGTGATGAATCTCAGTCCGGCGATGAGAGT
TCAAATCGAGAGAGTGAGGAAGTAAATTCGAGAGAGAAAGACTCAACTTCAAGCGATGGC
GAGTCAGATACTGGAGGTGAAGACTCAAATCCAGATGCTTCTGAGACAACAGAGAAAGCA
AAGAAAGGAGAGACGGAGAATGAGGTTTTTCCAGCTGCTGATCAATCAGAGATTTTGAAA
GAAGCTACAACACAAAATGGGCCATGGTCAACTCAGGCTGCTGAGTCTGAAAAGGAGAAT
GAGTCACAGGGTTCTTCATCATCTACGGATGACAAGAAGGGCGATAAGTGGAAGCTATGC
AAAACTGATGCTGGACCAGATTATATTCCCTGTCTGGATAATGTGCAAGCTATAAGGAAA
CTCCGACACACTAGCCACTATGAACATCGTGAAAGGCACTGCCCTGTTGAAGCTTCAACT
TGCCTGGTTCCTCTGCCTTCAGGATACAAGAAGTCAATTGGATGGCCTAGGAGCAGGGAT
CAGATATGGTACTCTAATGTTCCTCATGGAAAGCTAGCCCAGGTCAAGGGGCACCAGAAC
TGGGTCAAAGTAACTGGAGAGTACCTTACTTTCCCCGGTGGAGGTACTCAGTTTAAGCAA
GGCGCTCTTCATTACATTGATTTCCTCCAGAAGACCCTGCCTCAAATTTCATGGGGCAAA
CAAACACGTGTTATTTTGGATGTTGGTTGTGGAGTGGCCAGCTTTGGAGGATACCTCTTT
GAAAGAGATGTACTAGCAATGTCACTTGCCCCCAAGGATGAGCACGAAGCCCAAGTGCAA
TTTGCACTTGAAAGGGGTATCCCTGCTATATCAGCTGTTATGGGAACTAAAAGACTACCA
TTCCCTGGTAAAGTGTTTGATGCTGTCCATTGTGCACGGTGTAGAGTTCCATGGCATATT
GAAGGTGGCAAACTTCTCCTAGAATTGAATCGTGTCTTGCGGCCCGGTGGTCACTTCATT
TGGTCTGCGACACCAGTCTATCGGAAGGATGAGGAAAATGTTGGAATTTGGGAAGCCATG
TCTGAACTAACTAAGTCAATGTGCTGGGAACTATTGGAAATTAATGAAGATAAACTAAAT
GAAGTAGGTGTAGCTATATTCAGAAAGCCAACTACAAATGATTGCTACCAGAGTAGAACA
CAAAATGACCCACCTATGTGTGAAGAAGCTGATGATCCAGATGCTGCCTGGAATATAACA
CTTCAGGCATGTTTACACAAAGCTCCAGCAGATGCATCTGCACGTGGAGCAAAGTGGCCA
GCAAAATGGCCTTTGAGGTCAGAGAAGCTTCCTTATTGGTTGAAAAGTTCTCAAGTTGGA
GTTTATGGAAAAGCAGCCCCAGAAGACTTTGCTGCAGACTATGATCATTGGAAACATGTT
GTGTCAAAATCATATTTAAATGATCTGGGCATTAACTGGTCTTCAGTAAGGAATGTCATG
GATATGAAAGCTATTTATGGAGGATTTGCTGCAGCACTGAAAGACTTGAAAGTCTGGGTT
ATGAATGTAGTTCCAATTGACTCACCCGACACACTTCCAATTATATATGACCGTGGGTTG
TTTGGCATTTACCACGACTGGTGTGAATCCTTCAGCACATACCCCAGATCTTATGATCTT
CTTCATGCAGATCATCTATTCTCCGATATTAAGAAAAGGTTAATCCTACAGCGCCCGTTC
TGTAAGCTTACTGGCAACAAAATTTCGCTTAGTTGTGTAACTCGTGATCCTTCTTTTGCC
AACAGGTGCACAATAGAATCAGTATTTGCAGAAGTTGACAGGATTCTGAGGCCAGAAGGA
AAGTTGATTGTGCGGGACAATGCTGAAACTATTCTTGAAATTGAGAATATGGCTCGGTCA
GTAAAATGGAAAGTGAAGATGTCTTACTCGAAGGACGGTGAAGGATTACTATTTGTTCAA
AAATCATTTTGGCGTCCAAATCAGGAACAGATAGTCAAGTCAGCCATTGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400004254
PEP Infomation

pacid=37473302 transcript=PGSC0003DMT400006139 locus=PGSC0003DMG400002388 ID=PGSC0003DMT400006139.v4.03 annot-version=v4.03
Sequence

MAGGSYSHSGGRKSSDFCSKLTVVTFLGISCVGIWMLISSSFSITLQNSEISSTNLLGQY
SGNTDDFLVNAKRGEDETFQGEKRFRRGRSLEEIGDEKGLDSFQNEEREGESSNLRNEEE
NQENSESSSSGDESQSGDESSNRESEEVNSREKDSTSSDGESDTGGEDSNPDASETTEKA
KKGETENEVFPAADQSEILKEATTQNGPWSTQAAESEKENESQGSSSSTDDKKGDKWKLC
KTDAGPDYIPCLDNVQAIRKLRHTSHYEHRERHCPVEASTCLVPLPSGYKKSIGWPRSRD
QIWYSNVPHGKLAQVKGHQNWVKVTGEYLTFPGGGTQFKQGALHYIDFLQKTLPQISWGK
QTRVILDVGCGVASFGGYLFERDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLP
FPGKVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGHFIWSATPVYRKDEENVGIWEAM
SELTKSMCWELLEINEDKLNEVGVAIFRKPTTNDCYQSRTQNDPPMCEEADDPDAAWNIT
LQACLHKAPADASARGAKWPAKWPLRSEKLPYWLKSSQVGVYGKAAPEDFAADYDHWKHV
VSKSYLNDLGINWSSVRNVMDMKAIYGGFAAALKDLKVWVMNVVPIDSPDTLPIIYDRGL
FGIYHDWCESFSTYPRSYDLLHADHLFSDIKKRLILQRPFCKLTGNKISLSCVTRDPSFA
NRCTIESVFAEVDRILRPEGKLIVRDNAETILEIENMARSVKWKVKMSYSKDGEGLLFVQ
KSFWRPNQEQIVKSAIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400006139
Transcript Infomation

pacid=37473302 locus=PGSC0003DMG400002388 ID=PGSC0003DMT400006139.v4.03 annot-version=v4.03
Sequence

ATGGCTGGGGGAAGTTACTCCCATTCTGGTGGGAGGAAATCATCTGATTTCTGTTCAAAA
CTCACTGTTGTGACTTTTCTCGGAATTTCTTGCGTTGGGATATGGATGTTGATATCATCA
TCATTCAGTATAACTCTTCAAAATTCAGAGATATCTTCGACGAATCTTTTGGGGCAGTAT
TCAGGCAATACTGATGATTTTCTAGTCAATGCAAAGAGAGGAGAAGATGAAACATTCCAG
GGAGAAAAACGGTTCAGAAGGGGAAGGTCTTTAGAGGAGATTGGAGATGAAAAGGGGCTG
GATAGTTTCCAAAATGAGGAAAGGGAAGGAGAAAGCTCTAATTTAAGAAATGAAGAAGAA
AATCAAGAAAATTCTGAATCCAGTTCATCAGGTGATGAATCTCAGTCCGGCGATGAGAGT
TCAAATCGAGAGAGTGAGGAAGTAAATTCGAGAGAGAAAGACTCAACTTCAAGCGATGGC
GAGTCAGATACTGGAGGTGAAGACTCAAATCCAGATGCTTCTGAGACAACAGAGAAAGCA
AAGAAAGGAGAGACGGAGAATGAGGTTTTTCCAGCTGCTGATCAATCAGAGATTTTGAAA
GAAGCTACAACACAAAATGGGCCATGGTCAACTCAGGCTGCTGAGTCTGAAAAGGAGAAT
GAGTCACAGGGTTCTTCATCATCTACGGATGACAAGAAGGGCGATAAGTGGAAGCTATGC
AAAACTGATGCTGGACCAGATTATATTCCCTGTCTGGATAATGTGCAAGCTATAAGGAAA
CTCCGACACACTAGCCACTATGAACATCGTGAAAGGCACTGCCCTGTTGAAGCTTCAACT
TGCCTGGTTCCTCTGCCTTCAGGATACAAGAAGTCAATTGGATGGCCTAGGAGCAGGGAT
CAGATATGGTACTCTAATGTTCCTCATGGAAAGCTAGCCCAGGTCAAGGGGCACCAGAAC
TGGGTCAAAGTAACTGGAGAGTACCTTACTTTCCCCGGTGGAGGTACTCAGTTTAAGCAA
GGCGCTCTTCATTACATTGATTTCCTCCAGAAGACCCTGCCTCAAATTTCATGGGGCAAA
CAAACACGTGTTATTTTGGATGTTGGTTGTGGAGTGGCCAGCTTTGGAGGATACCTCTTT
GAAAGAGATGTACTAGCAATGTCACTTGCCCCCAAGGATGAGCACGAAGCCCAAGTGCAA
TTTGCACTTGAAAGGGGTATCCCTGCTATATCAGCTGTTATGGGAACTAAAAGACTACCA
TTCCCTGGTAAAGTGTTTGATGCTGTCCATTGTGCACGGTGTAGAGTTCCATGGCATATT
GAAGGTGGCAAACTTCTCCTAGAATTGAATCGTGTCTTGCGGCCCGGTGGTCACTTCATT
TGGTCTGCGACACCAGTCTATCGGAAGGATGAGGAAAATGTTGGAATTTGGGAAGCCATG
TCTGAACTAACTAAGTCAATGTGCTGGGAACTATTGGAAATTAATGAAGATAAACTAAAT
GAAGTAGGTGTAGCTATATTCAGAAAGCCAACTACAAATGATTGCTACCAGAGTAGAACA
CAAAATGACCCACCTATGTGTGAAGAAGCTGATGATCCAGATGCTGCCTGGAATATAACA
CTTCAGGCATGTTTACACAAAGCTCCAGCAGATGCATCTGCACGTGGAGCAAAGTGGCCA
GCAAAATGGCCTTTGAGGTCAGAGAAGCTTCCTTATTGGTTGAAAAGTTCTCAAGTTGGA
GTTTATGGAAAAGCAGCCCCAGAAGACTTTGCTGCAGACTATGATCATTGGAAACATGTT
GTGTCAAAATCATATTTAAATGATCTGGGCATTAACTGGTCTTCAGTAAGGAATGTCATG
GATATGAAAGCTATTTATGGAGGATTTGCTGCAGCACTGAAAGACTTGAAAGTCTGGGTT
ATGAATGTAGTTCCAATTGACTCACCCGACACACTTCCAATTATATATGACCGTGGGTTG
TTTGGCATTTACCACGACTGGTGTGAATCCTTCAGCACATACCCCAGATCTTATGATCTT
CTTCATGCAGATCATCTATTCTCCGATATTAAGAAAAGGTTAATCCTACAGCGCCCGTTC
TGTAAGCTTACTGGCAACAAAATTTCGCTTAGTTGTGTAACTCGTGATCCTTCTTTTGCC
AACAGGTGCACAATAGAATCAGTATTTGCAGAAGTTGACAGGATTCTGAGGCCAGAAGGA
AAGTTGATTGTGCGGGACAATGCTGAAACTATTCTTGAAATTGAGAATATGGCTCGGTCA
GTAAAATGGAAAGTGAAGATGTCTTACTCGAAGGACGGTGAAGGATTACTATTTGTTCAA
AAATCATTTTGGCGTCCAAATCAGGAACAGATAGTCAAGTCAGCCATTGCATAA