Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006102
CDS Infomation

pacid=37448763 polypeptide=PGSC0003DMP400004228 locus=PGSC0003DMG402002368 ID=PGSC0003DMT400006102.v4.03 annot-version=v4.03
Sequence

ATGGATTTCTGGCAAAAAGCTCGGAGTTTCGCTGAAGAAGCAGCAAAGCGTACCCAAGAA
TTCACTAAAGAAGCCGCTAATCGTTCACAGGACCTAACCATTGGTTCCTCCAAACTCTCT
GACGTTGTTCTAGAAGCATCCAAACGATCCAAAGAATTCGCTGCTGAGGCATCCAAGAGA
TCCAAAGAAATTGCCGTTGAGGCTTCCAAACGATCCAAAGAAATTGCTGCTGAAGCTTCT
AAACGCGCCGATGTTATTGTTTCCGAAGCTTCTAAACGTGCCGATCAGATCAAAGTTGAT
GCTCTCAAACGCGCTGAACAGATCAAGTTTCAAATTCCTTCCGCTGCGCTTTCTCACATT
GTAGATTCCTCGCCTTCTCCGACGACTCAAACAGCGTCGCCTGCACCTACGCCTGCCGAT
CTCCTGAAATTTGGAGTTACCGATGACTTGAGAGAATTCGTAAAGGGGATTACCATTAAT
ACGTTTCAGGATTTTCCACTTGAAGATGATTCAGTGATCTCTGATATTCCTACAGTCTCA
AATGTTCGGCAGGATCTTACAGAATTTCAGGAAAAACACGCAAAATTTGTTCTTTCATCT
GTCAAGGAAATTTCAAAGCTAAGATATGAGTTATGCCCACGCATAATGAAGGAAAGGAAG
TTCTGGAGAATCTACTTTATTTTAGTTAACAGTCATGTGGCCCCGTATGAAAAGAAATAC
ACGGAAGAGGCCGAGGCTGAAATAAAATCTGTTGAAAAGGCTCAAGTTGAGAGTGAAAAG
GAGGTTTCATTAGCTGGAACAATTTCTAAACCAGTGGCTGAGGCAACTGCCCAGAAAAAT
AAGAAGGCAACCTCATCAACATCAGACCAGGATTTGGATGTTTTTCTCCTTGGAGAAGAC
AGCGATGATGGGCCAGATGATGGAGATGATGCCTTTGATGATGATTTTGACAAGATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400004228
PEP Infomation

pacid=37448763 transcript=PGSC0003DMT400006102 locus=PGSC0003DMG402002368 ID=PGSC0003DMT400006102.v4.03 annot-version=v4.03
Sequence

MDFWQKARSFAEEAAKRTQEFTKEAANRSQDLTIGSSKLSDVVLEASKRSKEFAAEASKR
SKEIAVEASKRSKEIAAEASKRADVIVSEASKRADQIKVDALKRAEQIKFQIPSAALSHI
VDSSPSPTTQTASPAPTPADLLKFGVTDDLREFVKGITINTFQDFPLEDDSVISDIPTVS
NVRQDLTEFQEKHAKFVLSSVKEISKLRYELCPRIMKERKFWRIYFILVNSHVAPYEKKY
TEEAEAEIKSVEKAQVESEKEVSLAGTISKPVAEATAQKNKKATSSTSDQDLDVFLLGED
SDDGPDDGDDAFDDDFDKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400006102
Transcript Infomation

pacid=37448763 locus=PGSC0003DMG402002368 ID=PGSC0003DMT400006102.v4.03 annot-version=v4.03
Sequence

ATGGATTTCTGGCAAAAAGCTCGGAGTTTCGCTGAAGAAGCAGCAAAGCGTACCCAAGAA
TTCACTAAAGAAGCCGCTAATCGTTCACAGGACCTAACCATTGGTTCCTCCAAACTCTCT
GACGTTGTTCTAGAAGCATCCAAACGATCCAAAGAATTCGCTGCTGAGGCATCCAAGAGA
TCCAAAGAAATTGCCGTTGAGGCTTCCAAACGATCCAAAGAAATTGCTGCTGAAGCTTCT
AAACGCGCCGATGTTATTGTTTCCGAAGCTTCTAAACGTGCCGATCAGATCAAAGTTGAT
GCTCTCAAACGCGCTGAACAGATCAAGTTTCAAATTCCTTCCGCTGCGCTTTCTCACATT
GTAGATTCCTCGCCTTCTCCGACGACTCAAACAGCGTCGCCTGCACCTACGCCTGCCGAT
CTCCTGAAATTTGGAGTTACCGATGACTTGAGAGAATTCGTAAAGGGGATTACCATTAAT
ACGTTTCAGGATTTTCCACTTGAAGATGATTCAGTGATCTCTGATATTCCTACAGTCTCA
AATGTTCGGCAGGATCTTACAGAATTTCAGGAAAAACACGCAAAATTTGTTCTTTCATCT
GTCAAGGAAATTTCAAAGCTAAGATATGAGTTATGCCCACGCATAATGAAGGAAAGGAAG
TTCTGGAGAATCTACTTTATTTTAGTTAACAGTCATGTGGCCCCGTATGAAAAGAAATAC
ACGGAAGAGGCCGAGGCTGAAATAAAATCTGTTGAAAAGGCTCAAGTTGAGAGTGAAAAG
GAGGTTTCATTAGCTGGAACAATTTCTAAACCAGTGGCTGAGGCAACTGCCCAGAAAAAT
AAGAAGGCAACCTCATCAACATCAGACCAGGATTTGGATGTTTTTCTCCTTGGAGAAGAC
AGCGATGATGGGCCAGATGATGGAGATGATGCCTTTGATGATGATTTTGACAAGATATAG