Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006075
CDS Infomation

pacid=37444972 polypeptide=PGSC0003DMP400004212 locus=PGSC0003DMG400002359 ID=PGSC0003DMT400006075.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAGTGGCACTACTCCAATATGTGAAGATATTGATCTAAATCGATTTAAAAAT
ACCGTTTCAACATCTCATGATGATGATGATCCTTCCTCCCAACTCCCTGAAAATGTTGAA
ATTTTTTCAAAAATCATTGAGTCCAGGATTGCGAAATGTAATTCTGGTGAAACTCCGACT
AGATTGGGAAAGATGACTGAGGAAGAATCCTTTTTCCTTGAAGCTGTGATGCATTTATCA
AAATTGACGAATGTAATCGCCAAATCTCCATCAGGATCAACGTTGTTAAGTCGAACCAAT
ATTGTGTTAAAACAAGCCATGACTTTCATGGAGGAAGAATTGCGAACATTATTAGAAGAT
TTTGGAGGTAATTCCAATTCAAAAGTTGATAAAAAATCACAAATCGAGGATTATCCATGG
TATCCTCCAGAGGTTGTGATAAGAATGAATCGAATTGCAACAACCATGATCTCAGCTGGA
TTTGAAACAGCTTGTTGTCAAGTGTATTCAATTTCACGAAGAAATGCATTTTATGAGCAA
ATGAAAATGCTCGAATTCGAGAAGATAAATGTAGATGATGTGCAGAAAATGTCTTGGGAT
TCTCTAGAAGGAGAGATCACTAGATGGATCAATGTTGCGAGGAACTGCTCGAATACTCTG
TTCCTCGCAGAGAGGAGACTCGGAGAATCAGTTTTCTCCGCGTCTCCAATGATCTCTCAA
AGCCTTTTTAACAATCTGGCGCGTTCCATTGTAATACAGATACTTGACTTTGCTGAGGCT
GTCTCATGGACAAAACGCTCTGCCGAAAAGCTCTTCAAATATCTAGACATATACGATACA
ATTCGCGATCTCATTCATGCGATAAGTGAATCTCTCTCAATTAATGACTGTGAACACGAA
TTAAAGTCTGAGATCTTAGCTACAAGAGATAGATTCGGCGATGCTGTCATAAATATATTC
AATGATCTCGAAATCTCCATCAAGAACGATGCAGCCAGAACACCGGTCCCTGGTGGTGCA
GTGCACCCGCTCACACGTTACGTGATGAATTATCTAAAATACGCCTGTGAGTACAAAGAC
GCCCTGGAACACATTTTCAAGGAACATACCGCCACGTCACCATCAAAGTTGAAATCATCT
GTTGATGAAGCTGAGAGCGAAAGCCCACACGAAAATGTAGTAGCAGAGACGACACCGTTA
ACAGTACAGCTTATGACAATAATGGAGCTGTTGGATGCAAATCTAGAAGCCAAGTCAAAC
TTGTATAGAGACACTTCGTTGCGCGACATATTCTTGATGAATAACGGTAGATACATCTTA
CAAAAAGCGAAAGGATCTACAGAGGTCCGTCAAGTGATGGGAGACACGTGGTGTCGAAGA
AGATCTACAACCGTGAGGCAATACCACAAGAATTACCAAAGAGAAACATGGGGAAAACTG
CTACAAATACTAAATCATGATGGAATGCAAGTAAATGGGAAGGTGACAAAGCCAATAGTG
AAAGAGAGGTTCAAGAATTTCAGCACTATGCTAGATGAAATTCATCGTACACAGAGCACT
TGGGTAGTGAGTGACGAGCAGCTTCGATCCGAGCTCAGAGTTTCTATATCAGCCGTGTTA
ATTCCGGCCTATAGATCCTTCTGTGGGAGATTTAGGCAGTATCTAGACAACACAAAGCAT
GCAGACAAGTATATTAAGTATCAGCCAGAAGATATTGAAACGTTAGTTGAGGGCCTCTTT
GACGGAAATCCTACATCTATGGCACGGAGGAAGACGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004212
PEP Infomation

pacid=37444972 transcript=PGSC0003DMT400006075 locus=PGSC0003DMG400002359 ID=PGSC0003DMT400006075.v4.03 annot-version=v4.03
Sequence

MEKSGTTPICEDIDLNRFKNTVSTSHDDDDPSSQLPENVEIFSKIIESRIAKCNSGETPT
RLGKMTEEESFFLEAVMHLSKLTNVIAKSPSGSTLLSRTNIVLKQAMTFMEEELRTLLED
FGGNSNSKVDKKSQIEDYPWYPPEVVIRMNRIATTMISAGFETACCQVYSISRRNAFYEQ
MKMLEFEKINVDDVQKMSWDSLEGEITRWINVARNCSNTLFLAERRLGESVFSASPMISQ
SLFNNLARSIVIQILDFAEAVSWTKRSAEKLFKYLDIYDTIRDLIHAISESLSINDCEHE
LKSEILATRDRFGDAVINIFNDLEISIKNDAARTPVPGGAVHPLTRYVMNYLKYACEYKD
ALEHIFKEHTATSPSKLKSSVDEAESESPHENVVAETTPLTVQLMTIMELLDANLEAKSN
LYRDTSLRDIFLMNNGRYILQKAKGSTEVRQVMGDTWCRRRSTTVRQYHKNYQRETWGKL
LQILNHDGMQVNGKVTKPIVKERFKNFSTMLDEIHRTQSTWVVSDEQLRSELRVSISAVL
IPAYRSFCGRFRQYLDNTKHADKYIKYQPEDIETLVEGLFDGNPTSMARRKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400006075
Transcript Infomation

pacid=37444972 locus=PGSC0003DMG400002359 ID=PGSC0003DMT400006075.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAGTGGCACTACTCCAATATGTGAAGATATTGATCTAAATCGATTTAAAAAT
ACCGTTTCAACATCTCATGATGATGATGATCCTTCCTCCCAACTCCCTGAAAATGTTGAA
ATTTTTTCAAAAATCATTGAGTCCAGGATTGCGAAATGTAATTCTGGTGAAACTCCGACT
AGATTGGGAAAGATGACTGAGGAAGAATCCTTTTTCCTTGAAGCTGTGATGCATTTATCA
AAATTGACGAATGTAATCGCCAAATCTCCATCAGGATCAACGTTGTTAAGTCGAACCAAT
ATTGTGTTAAAACAAGCCATGACTTTCATGGAGGAAGAATTGCGAACATTATTAGAAGAT
TTTGGAGGTAATTCCAATTCAAAAGTTGATAAAAAATCACAAATCGAGGATTATCCATGG
TATCCTCCAGAGGTTGTGATAAGAATGAATCGAATTGCAACAACCATGATCTCAGCTGGA
TTTGAAACAGCTTGTTGTCAAGTGTATTCAATTTCACGAAGAAATGCATTTTATGAGCAA
ATGAAAATGCTCGAATTCGAGAAGATAAATGTAGATGATGTGCAGAAAATGTCTTGGGAT
TCTCTAGAAGGAGAGATCACTAGATGGATCAATGTTGCGAGGAACTGCTCGAATACTCTG
TTCCTCGCAGAGAGGAGACTCGGAGAATCAGTTTTCTCCGCGTCTCCAATGATCTCTCAA
AGCCTTTTTAACAATCTGGCGCGTTCCATTGTAATACAGATACTTGACTTTGCTGAGGCT
GTCTCATGGACAAAACGCTCTGCCGAAAAGCTCTTCAAATATCTAGACATATACGATACA
ATTCGCGATCTCATTCATGCGATAAGTGAATCTCTCTCAATTAATGACTGTGAACACGAA
TTAAAGTCTGAGATCTTAGCTACAAGAGATAGATTCGGCGATGCTGTCATAAATATATTC
AATGATCTCGAAATCTCCATCAAGAACGATGCAGCCAGAACACCGGTCCCTGGTGGTGCA
GTGCACCCGCTCACACGTTACGTGATGAATTATCTAAAATACGCCTGTGAGTACAAAGAC
GCCCTGGAACACATTTTCAAGGAACATACCGCCACGTCACCATCAAAGTTGAAATCATCT
GTTGATGAAGCTGAGAGCGAAAGCCCACACGAAAATGTAGTAGCAGAGACGACACCGTTA
ACAGTACAGCTTATGACAATAATGGAGCTGTTGGATGCAAATCTAGAAGCCAAGTCAAAC
TTGTATAGAGACACTTCGTTGCGCGACATATTCTTGATGAATAACGGTAGATACATCTTA
CAAAAAGCGAAAGGATCTACAGAGGTCCGTCAAGTGATGGGAGACACGTGGTGTCGAAGA
AGATCTACAACCGTGAGGCAATACCACAAGAATTACCAAAGAGAAACATGGGGAAAACTG
CTACAAATACTAAATCATGATGGAATGCAAGTAAATGGGAAGGTGACAAAGCCAATAGTG
AAAGAGAGGTTCAAGAATTTCAGCACTATGCTAGATGAAATTCATCGTACACAGAGCACT
TGGGTAGTGAGTGACGAGCAGCTTCGATCCGAGCTCAGAGTTTCTATATCAGCCGTGTTA
ATTCCGGCCTATAGATCCTTCTGTGGGAGATTTAGGCAGTATCTAGACAACACAAAGCAT
GCAGACAAGTATATTAAGTATCAGCCAGAAGATATTGAAACGTTAGTTGAGGGCCTCTTT
GACGGAAATCCTACATCTATGGCACGGAGGAAGACGTAA