Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006042
CDS Infomation

pacid=37450872 polypeptide=PGSC0003DMP400004194 locus=PGSC0003DMG400002351 ID=PGSC0003DMT400006042.v4.03 annot-version=v4.03
Sequence

ATGGAGACAATTCAAATGATAGTAACAATATGTTGTTGTGCCATAGCAATTACTCTGTTA
TGGAAAGTACTGAATTGGGTTTGGTTCAATCCAAAGAAGTTGGAGAATTTGTTGAGGAAA
CAAGGGCTAAAAGGGAATTCATACAGACTATTATATGGGGACATGAAAGATGTTACTAGA
ATGATTAAGGAAGCTAATTCAAAGCCTATGAATATGTCTGATCATGATTTAGCACCAAGA
ATGATGCCTTTCTTTCTTGAAACCATCAACAAATATGGGAAAAAATGTTTTACATGGATG
GGTCCAAAACCACAAGTATTGATCATGGACCCTGAGCTTATAAAGGAAGTACTCTCGAAA
ACTTATTTGTATCAAAAGCCTGGTGGAAATCCATTAGGCAGCTTATTTGTACAAGGATTA
GTAAGCTATGAGAAAGACAAATGGGCCAAAAATAGAAAAATCATCAATCCCGCGTTCCAT
CTAGAGAAGTTAAAGCATATGCTTCCAGCTTTTTACTTGAGCTGTAGTGAGATGCTGAGC
AAATGGGAAGACGTTGAAGGCTCTCATGAGATAGATGTATGGCCTCACCTGCAGCAATTG
ACTAGTGATGTGATCTCTCGGACAGCTTTTGGTAGTAGTTATGAAGAAGGTAGAAAGATT
TTTGAACTTCAAAATGAACAAGTTCCGCATTTTATCGAAGCTATGCGCTCAGTTTATATC
CCAGGATGGAGATTTTTGCCAACAAAGAGGAACAGAAGAATGAAGGAAATAAAGAAGGAT
GTTCGGTCCTTAATTAGAGGTATTATTGATAAAAGATTGAAGGCAATGGAAGCTGGGGAC
GCCGATAATGAGGATCTATTGGGCATATTGCTGGAATCAAATTTTAAAGAAATTGAACAG
CAGGGCGGAAACAAGGACTTTGGAATGAGCATCGATGAAATCATTGAAGAATGCAAGCTG
TTCTATTTTGCTGGATCAGAAACTACATCAGTGTGGCTCCTATGGACTCTGGTGCTTTTA
AGCAGGTATCAAGATTGGCAGGCACAGGCCAGAGAAGAAGTCTTGCAAGTGTTTGGGAGT
CGGAAACCAGATTTTAATGGATTAAATCGTCTAAAAGTTGTAACGATGATCTTGTACGAG
TCATTAAGGCTATATTCCCCGGTAACAACACTTACCCGACTAGCTATTGAAGACATTACG
CTAGGAGAAGTATCTTTACCAGCTGGTGTGCTAGTTTCATTGCCAACGGTCATATTGCAT
CATGATAAAGAGATATGGGGTGAAGATGCAAACAAGTTCAATCCAGAGAGATTTAGAGAA
GGAATATCAAGTGCAACAAAGGGTCAAGTTACATATTTTCCATTTAGTTGGGGTCCAAGA
ATATGCATTGGACAAAATTTTGCCATGTTGGAAGCAAAGATGGCTCTGTCTATGATCCTA
CAAACCTTTTCTTTCGAATTGTCTCCATCTTACACACATGCTCCTCAATACTCAGTAACC
GTTCAGCCTCAGTATGGTGCTCCTCTTATTTTCCACAAACTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400004194
PEP Infomation

pacid=37450872 transcript=PGSC0003DMT400006042 locus=PGSC0003DMG400002351 ID=PGSC0003DMT400006042.v4.03 annot-version=v4.03
Sequence

METIQMIVTICCCAIAITLLWKVLNWVWFNPKKLENLLRKQGLKGNSYRLLYGDMKDVTR
MIKEANSKPMNMSDHDLAPRMMPFFLETINKYGKKCFTWMGPKPQVLIMDPELIKEVLSK
TYLYQKPGGNPLGSLFVQGLVSYEKDKWAKNRKIINPAFHLEKLKHMLPAFYLSCSEMLS
KWEDVEGSHEIDVWPHLQQLTSDVISRTAFGSSYEEGRKIFELQNEQVPHFIEAMRSVYI
PGWRFLPTKRNRRMKEIKKDVRSLIRGIIDKRLKAMEAGDADNEDLLGILLESNFKEIEQ
QGGNKDFGMSIDEIIEECKLFYFAGSETTSVWLLWTLVLLSRYQDWQAQAREEVLQVFGS
RKPDFNGLNRLKVVTMILYESLRLYSPVTTLTRLAIEDITLGEVSLPAGVLVSLPTVILH
HDKEIWGEDANKFNPERFREGISSATKGQVTYFPFSWGPRICIGQNFAMLEAKMALSMIL
QTFSFELSPSYTHAPQYSVTVQPQYGAPLIFHKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400006042
Transcript Infomation

pacid=37450872 locus=PGSC0003DMG400002351 ID=PGSC0003DMT400006042.v4.03 annot-version=v4.03
Sequence

ATGGAGACAATTCAAATGATAGTAACAATATGTTGTTGTGCCATAGCAATTACTCTGTTA
TGGAAAGTACTGAATTGGGTTTGGTTCAATCCAAAGAAGTTGGAGAATTTGTTGAGGAAA
CAAGGGCTAAAAGGGAATTCATACAGACTATTATATGGGGACATGAAAGATGTTACTAGA
ATGATTAAGGAAGCTAATTCAAAGCCTATGAATATGTCTGATCATGATTTAGCACCAAGA
ATGATGCCTTTCTTTCTTGAAACCATCAACAAATATGGGAAAAAATGTTTTACATGGATG
GGTCCAAAACCACAAGTATTGATCATGGACCCTGAGCTTATAAAGGAAGTACTCTCGAAA
ACTTATTTGTATCAAAAGCCTGGTGGAAATCCATTAGGCAGCTTATTTGTACAAGGATTA
GTAAGCTATGAGAAAGACAAATGGGCCAAAAATAGAAAAATCATCAATCCCGCGTTCCAT
CTAGAGAAGTTAAAGCATATGCTTCCAGCTTTTTACTTGAGCTGTAGTGAGATGCTGAGC
AAATGGGAAGACGTTGAAGGCTCTCATGAGATAGATGTATGGCCTCACCTGCAGCAATTG
ACTAGTGATGTGATCTCTCGGACAGCTTTTGGTAGTAGTTATGAAGAAGGTAGAAAGATT
TTTGAACTTCAAAATGAACAAGTTCCGCATTTTATCGAAGCTATGCGCTCAGTTTATATC
CCAGGATGGAGATTTTTGCCAACAAAGAGGAACAGAAGAATGAAGGAAATAAAGAAGGAT
GTTCGGTCCTTAATTAGAGGTATTATTGATAAAAGATTGAAGGCAATGGAAGCTGGGGAC
GCCGATAATGAGGATCTATTGGGCATATTGCTGGAATCAAATTTTAAAGAAATTGAACAG
CAGGGCGGAAACAAGGACTTTGGAATGAGCATCGATGAAATCATTGAAGAATGCAAGCTG
TTCTATTTTGCTGGATCAGAAACTACATCAGTGTGGCTCCTATGGACTCTGGTGCTTTTA
AGCAGGTATCAAGATTGGCAGGCACAGGCCAGAGAAGAAGTCTTGCAAGTGTTTGGGAGT
CGGAAACCAGATTTTAATGGATTAAATCGTCTAAAAGTTGTAACGATGATCTTGTACGAG
TCATTAAGGCTATATTCCCCGGTAACAACACTTACCCGACTAGCTATTGAAGACATTACG
CTAGGAGAAGTATCTTTACCAGCTGGTGTGCTAGTTTCATTGCCAACGGTCATATTGCAT
CATGATAAAGAGATATGGGGTGAAGATGCAAACAAGTTCAATCCAGAGAGATTTAGAGAA
GGAATATCAAGTGCAACAAAGGGTCAAGTTACATATTTTCCATTTAGTTGGGGTCCAAGA
ATATGCATTGGACAAAATTTTGCCATGTTGGAAGCAAAGATGGCTCTGTCTATGATCCTA
CAAACCTTTTCTTTCGAATTGTCTCCATCTTACACACATGCTCCTCAATACTCAGTAACC
GTTCAGCCTCAGTATGGTGCTCCTCTTATTTTCCACAAACTATAA