Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006041
CDS Infomation

pacid=37451135 polypeptide=PGSC0003DMP400004193 locus=PGSC0003DMG400002350 ID=PGSC0003DMT400006041.v4.03 annot-version=v4.03
Sequence

ATGGATCATCACAATATGCTTTGTCCGGTCAAATATACCGAACACAAGAGAACAATCAGA
AAAGTTACTAATATAAAGCCGCTTAAGAAGGTAGCGGATGTCCGGAAATCCTCGGAGTAT
AATCCTACTATTCCGAGGACTGTACGGATATCTGTTACTGATCCAGATGCAACTGACTCT
TCAAGTGATGAAGAAGAGCTTTTTGGGCGGAAACGTGTGAAAAGATACATTAGTGAAATC
AGTATTGAGATGCAATCAATTAATGATGTTAAAACTGTGAGTACTAGTAATGGCAAGAAG
CGAGTAGCTGAAGCTTCACAAGCGAAGCAGAAGGCGTTGAAAGGGAAGGAAGTGGTGCAG
CTACCGGCTGATGGAACTGTTAGGAAGTTCAGGGGAGTGCGTCAACGGCCGTGGGGGAAA
TGGGCTGCTGAAATCAGAGACCCAGCGCGTCGCGTTAGGCTCTGGTTAGGTACTTATGAT
ACTGCTGAAGAAGCTGCTATGGTTTATGACAATGCAGCTATTAAGCTCCGTGGACCAGAT
GCTTTAACAAATTTCATTACTCCTCCAATGAAGGAGAATCCGGAAGTCAATGTGGCTTCG
AATTCGGGCTACGAATCTGGTGATGAATCACACAATCTTTCTTCTCCCACCTCTGTTTTG
CGGTTCAGAACTAGTCAATCCAGTGAAGAAGCAGAGCAACAAAGCGTGTCTGGGTCCGAA
CCAATTCTCGAAGAAACAAAAGTGGAAGAAAATTGCACAATATTGGTGGAACAACCAAAC
AGTGAGCAAAACGTCGAACACCTTGAGTGCCAGGGCGAGACACTTACAGTCATACCAGAC
TATTCAAATGAGTACTTACCAACAGACGTTTCCTTCTTAGACGATTTTTTCAACTTTGCA
GATGCAGAACAAACACTATTTAACGACACAACAAGTTTCACCAATGATGATTTGTTGACG
CCATCCAAATACGTACCGTCTTGGGATTTCACCAATGACTTTGTATTAGATCCTGAGATT
TGCAAATTTGATGATTCATTTCTAGACTTGGGTGCATTAGAAGTGGATAATTATTTCAAA
GACATTGGAGATTTTTCCAGTGTTGATGTTCTAATGGCATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400004193
PEP Infomation

pacid=37451135 transcript=PGSC0003DMT400006041 locus=PGSC0003DMG400002350 ID=PGSC0003DMT400006041.v4.03 annot-version=v4.03
Sequence

MDHHNMLCPVKYTEHKRTIRKVTNIKPLKKVADVRKSSEYNPTIPRTVRISVTDPDATDS
SSDEEELFGRKRVKRYISEISIEMQSINDVKTVSTSNGKKRVAEASQAKQKALKGKEVVQ
LPADGTVRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPD
ALTNFITPPMKENPEVNVASNSGYESGDESHNLSSPTSVLRFRTSQSSEEAEQQSVSGSE
PILEETKVEENCTILVEQPNSEQNVEHLECQGETLTVIPDYSNEYLPTDVSFLDDFFNFA
DAEQTLFNDTTSFTNDDLLTPSKYVPSWDFTNDFVLDPEICKFDDSFLDLGALEVDNYFK
DIGDFSSVDVLMAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400006041
Transcript Infomation

pacid=37451135 locus=PGSC0003DMG400002350 ID=PGSC0003DMT400006041.v4.03 annot-version=v4.03
Sequence

ATGGATCATCACAATATGCTTTGTCCGGTCAAATATACCGAACACAAGAGAACAATCAGA
AAAGTTACTAATATAAAGCCGCTTAAGAAGGTAGCGGATGTCCGGAAATCCTCGGAGTAT
AATCCTACTATTCCGAGGACTGTACGGATATCTGTTACTGATCCAGATGCAACTGACTCT
TCAAGTGATGAAGAAGAGCTTTTTGGGCGGAAACGTGTGAAAAGATACATTAGTGAAATC
AGTATTGAGATGCAATCAATTAATGATGTTAAAACTGTGAGTACTAGTAATGGCAAGAAG
CGAGTAGCTGAAGCTTCACAAGCGAAGCAGAAGGCGTTGAAAGGGAAGGAAGTGGTGCAG
CTACCGGCTGATGGAACTGTTAGGAAGTTCAGGGGAGTGCGTCAACGGCCGTGGGGGAAA
TGGGCTGCTGAAATCAGAGACCCAGCGCGTCGCGTTAGGCTCTGGTTAGGTACTTATGAT
ACTGCTGAAGAAGCTGCTATGGTTTATGACAATGCAGCTATTAAGCTCCGTGGACCAGAT
GCTTTAACAAATTTCATTACTCCTCCAATGAAGGAGAATCCGGAAGTCAATGTGGCTTCG
AATTCGGGCTACGAATCTGGTGATGAATCACACAATCTTTCTTCTCCCACCTCTGTTTTG
CGGTTCAGAACTAGTCAATCCAGTGAAGAAGCAGAGCAACAAAGCGTGTCTGGGTCCGAA
CCAATTCTCGAAGAAACAAAAGTGGAAGAAAATTGCACAATATTGGTGGAACAACCAAAC
AGTGAGCAAAACGTCGAACACCTTGAGTGCCAGGGCGAGACACTTACAGTCATACCAGAC
TATTCAAATGAGTACTTACCAACAGACGTTTCCTTCTTAGACGATTTTTTCAACTTTGCA
GATGCAGAACAAACACTATTTAACGACACAACAAGTTTCACCAATGATGATTTGTTGACG
CCATCCAAATACGTACCGTCTTGGGATTTCACCAATGACTTTGTATTAGATCCTGAGATT
TGCAAATTTGATGATTCATTTCTAGACTTGGGTGCATTAGAAGTGGATAATTATTTCAAA
GACATTGGAGATTTTTCCAGTGTTGATGTTCTAATGGCATTATAA