Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005974
CDS Infomation

pacid=37428106 polypeptide=PGSC0003DMP400004143 locus=PGSC0003DMG400002323 ID=PGSC0003DMT400005974.v4.03 annot-version=v4.03
Sequence

ATGTGGAGAAAAAATCATCTGAAATCTATTAGAAAGAAGAAAGATGAAGAATACGCATTA
GGAAAGAAACTAGTTGTCACATCTCTAAAAGATATTCAACTCCATTTGAAAGTCATCGTA
CTTTTCACAACTTCCTTCATGATTTGGTTTCTTTTCCTCTTAGTATTTTCGCCCAAAAGA
GTATCAAATCCAATCCGAGTATTCCTCTCAACTCCTCCAGCAGAATGCAAAGACAATTTC
TCCGTCTACATATACAATCTTCCATCCAAGTACAATTTTGATCTCTTGAGAGATTGTACT
AGTTTGAATATCTACACAGATATGTGCCCTCATGTTACAAATAATGGTCTCGGAAGTCCA
CTCCCTCAAATGGGTTCTAGCTGGTTTACCACTCATCAACTCATCGCTGAATTGATCATT
CATGCTCGAATCCAGAATCATCCTTGTCGTACAGAGGATGCACATAAATCAACTCTGTTT
TATGTTCCTTTTTATGGGGGCCTCCATGCCTCGAGCAAGTTTCGCGAGCCAAATTATACC
ACCCGTGATGCATTGGCTGTCGAATTGGTGGAGTATATACAAGAGCAAAAGTGGTGGAAG
AGGAATAGTGGTAAAGACCATTTCATGGCTTTTGGAAGAACTGCTTGGGATTTCATGAGG
AGTGATGAAGTTCCCGATTTCGGTGCCAACAAGTTGTTGAACATGTCCCCTGTGAAGAAT
ATGTCAGTACTTCTTGTTGAAAGACATCCTTGGGAAGGACATAATCAATATGGAATTCCT
TACCCCTCGTATTTCCATCCATCAACCTCGTCAGAGATGGTTGAATGGCAGAATAATATG
AGTTATATAGATAGGATTCATTTATTTTCATTTGTTGGGGCTCCGCGGACAGGAAAGAAA
AAAGTTGTGACGAGAGACAAAGTCATAAAACAGTGTGAGGAGTCAAGTAAGTGTTTGATT
TTGAAATGTGGACATGGACCAAGTAAATGTCACAACCCGAGAGAAGTTGTTAAAGTGATG
ATGAGATCTAATTTTTGCTTGCAAGTCTTAGGTGATTCATATACTCGACGTTCTACCTTT
GATTCCATGCTAGCTGGATGTATCCCAGTTTTCTTCTCAAATCACACCGCGTATTCACAA
TACAAATGGTTTTTACCTTCTGATCCTACCACATATTCCGTTTACATTGATTTAGAACGA
AATCATAGCATAAGAATTGAGGAGGAGCTTCTCAAAATTCCAATGGATGAGGTAGAAAGA
AAGAGGAGGACTGTCATAGAATTGATCCCAACGTTCACCTATGCACACCCTAATTCTACT
TCATATGGATTTAAGGATGTTGTTGATGTTGCCCTGAAAGCACTCTCCGATCACGTTACC
TCATTGTTAAGATCACCTACCTTGCTAGATCTTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004143
PEP Infomation

pacid=37428106 transcript=PGSC0003DMT400005974 locus=PGSC0003DMG400002323 ID=PGSC0003DMT400005974.v4.03 annot-version=v4.03
Sequence

MWRKNHLKSIRKKKDEEYALGKKLVVTSLKDIQLHLKVIVLFTTSFMIWFLFLLVFSPKR
VSNPIRVFLSTPPAECKDNFSVYIYNLPSKYNFDLLRDCTSLNIYTDMCPHVTNNGLGSP
LPQMGSSWFTTHQLIAELIIHARIQNHPCRTEDAHKSTLFYVPFYGGLHASSKFREPNYT
TRDALAVELVEYIQEQKWWKRNSGKDHFMAFGRTAWDFMRSDEVPDFGANKLLNMSPVKN
MSVLLVERHPWEGHNQYGIPYPSYFHPSTSSEMVEWQNNMSYIDRIHLFSFVGAPRTGKK
KVVTRDKVIKQCEESSKCLILKCGHGPSKCHNPREVVKVMMRSNFCLQVLGDSYTRRSTF
DSMLAGCIPVFFSNHTAYSQYKWFLPSDPTTYSVYIDLERNHSIRIEEELLKIPMDEVER
KRRTVIELIPTFTYAHPNSTSYGFKDVVDVALKALSDHVTSLLRSPTLLDLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400005974
Transcript Infomation

pacid=37428106 locus=PGSC0003DMG400002323 ID=PGSC0003DMT400005974.v4.03 annot-version=v4.03
Sequence

ATGTGGAGAAAAAATCATCTGAAATCTATTAGAAAGAAGAAAGATGAAGAATACGCATTA
GGAAAGAAACTAGTTGTCACATCTCTAAAAGATATTCAACTCCATTTGAAAGTCATCGTA
CTTTTCACAACTTCCTTCATGATTTGGTTTCTTTTCCTCTTAGTATTTTCGCCCAAAAGA
GTATCAAATCCAATCCGAGTATTCCTCTCAACTCCTCCAGCAGAATGCAAAGACAATTTC
TCCGTCTACATATACAATCTTCCATCCAAGTACAATTTTGATCTCTTGAGAGATTGTACT
AGTTTGAATATCTACACAGATATGTGCCCTCATGTTACAAATAATGGTCTCGGAAGTCCA
CTCCCTCAAATGGGTTCTAGCTGGTTTACCACTCATCAACTCATCGCTGAATTGATCATT
CATGCTCGAATCCAGAATCATCCTTGTCGTACAGAGGATGCACATAAATCAACTCTGTTT
TATGTTCCTTTTTATGGGGGCCTCCATGCCTCGAGCAAGTTTCGCGAGCCAAATTATACC
ACCCGTGATGCATTGGCTGTCGAATTGGTGGAGTATATACAAGAGCAAAAGTGGTGGAAG
AGGAATAGTGGTAAAGACCATTTCATGGCTTTTGGAAGAACTGCTTGGGATTTCATGAGG
AGTGATGAAGTTCCCGATTTCGGTGCCAACAAGTTGTTGAACATGTCCCCTGTGAAGAAT
ATGTCAGTACTTCTTGTTGAAAGACATCCTTGGGAAGGACATAATCAATATGGAATTCCT
TACCCCTCGTATTTCCATCCATCAACCTCGTCAGAGATGGTTGAATGGCAGAATAATATG
AGTTATATAGATAGGATTCATTTATTTTCATTTGTTGGGGCTCCGCGGACAGGAAAGAAA
AAAGTTGTGACGAGAGACAAAGTCATAAAACAGTGTGAGGAGTCAAGTAAGTGTTTGATT
TTGAAATGTGGACATGGACCAAGTAAATGTCACAACCCGAGAGAAGTTGTTAAAGTGATG
ATGAGATCTAATTTTTGCTTGCAAGTCTTAGGTGATTCATATACTCGACGTTCTACCTTT
GATTCCATGCTAGCTGGATGTATCCCAGTTTTCTTCTCAAATCACACCGCGTATTCACAA
TACAAATGGTTTTTACCTTCTGATCCTACCACATATTCCGTTTACATTGATTTAGAACGA
AATCATAGCATAAGAATTGAGGAGGAGCTTCTCAAAATTCCAATGGATGAGGTAGAAAGA
AAGAGGAGGACTGTCATAGAATTGATCCCAACGTTCACCTATGCACACCCTAATTCTACT
TCATATGGATTTAAGGATGTTGTTGATGTTGCCCTGAAAGCACTCTCCGATCACGTTACC
TCATTGTTAAGATCACCTACCTTGCTAGATCTTGCTTAG