Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005965
CDS Infomation

pacid=37454917 polypeptide=PGSC0003DMP400004136 locus=PGSC0003DMG400002318 ID=PGSC0003DMT400005965.v4.03 annot-version=v4.03
Sequence

ATGAATCGGAGCTTCAGAGATTCTTTGATCACCGGGAAGAATTTCCCTATCTCTTCGCAG
CACCGGCGAGGACTTAGTCTTAATGGAGCTTCTAGGGAGCCCGACGATAATTTGGATCTC
TTCTCCAAAAGTCGCCGGAGTGTTTCTGTTGCCTCCTCCGACGAGACTGATGTTACGGTT
AAGCTGGGAAGGCTTTCAATTGGATCAGTGAAGCAATTAAAGAGTGGATTAGAGGATCTG
TTGGCATCTACGGAAGGAGAGAAACATGATTATGATTGGCTCCTCACTCCTCCAGGAACA
CCTCTTGTTCCTACATCAGATGGAAGTGAATCAAAACCTGCTTCAGTGGGTCCAAGAGGC
AGCTCATTGGGAAGATCTGCTTCCACTACTAAGGCTTCAAGGCTTTCAGTGTCTCAATCA
GAGAGCAATACTCCTGCAAGACCAACTCGGAGTAATTCAGTTACTCGACCTTCCATATCT
AGCTCTCAGTATTGTACTTACTCAAATAAATCAGGCTCTATTCTAAACACAAGCTCTGCA
TCGGTCTCCTCCTATATTAGACCATCTACACCAACCAGCCGTTCATCTTCTTCAGCCAGG
CCTTCCACGCCGACCTCCCGTGCAACAGTGTCCAGACCTTCAACTCCTTCTAAAGCCCGC
CAAGCCCCAAGTACTTCTAGGCCAACCCAGAGCTCTAGACCTTCTACTCCAACATCCCGG
CCCCAAATATCGGGAAACTTGAGTACCCCTTCAAGGCCTACTTCAAGGCCTTCAACACCT
ACTCGTCGGACTATAACACCTTCATTATCTCCAGCATCTAGATCTTCAACTCCAGCAGGG
CGCCCTGTCACCAATGGACGAACTGCAGCTTCTCTTTCTCGTCCAAGCTCCCCTAGTCCC
CAAGTTCGGCGACCATCGCAGCCAATAGTTCCCCCAGATTTTTCACTTGAAACACCACCA
AACCTACGCACAACTCTGCCAGATAGACCTCTGTCTGCTGGCAGGTCCAGGCCAAATCCT
TCTGTCACTACCAAGGGAAATGCAGAAGCCCCAAGTGTTGCAAATCCTCGAAGACAGTCA
TCCCCCATTGTTAGCAGGGGAAGACTAACAGAACCCTCTGGTAGAGGACGAGTGCTTGGC
AGTGGGCAGCTAAGTGATATATCTGATTCCCGCAGGGCTTCACATGTCTCAGAGTTGTCT
ACAAGGAAGCCTGTAAAGACTGCTGCTGATAACATGGGACTTGGAAGGACAATTTCTAAG
AAATCCCTTGACGTGGCAATCAGGCATATGGATATTAGAAATGGCATTAATGGTGTTCGT
CCAAGTTCTGGTTCAACCCTCTTCCCTCACAGTATTCGATCCACAAATGGGAAAGGCCAG
CCTTCTCATGGTTCGACTGGCGCATCCTCTTTCAATGAGAATGCATCTTACCACTACAAT
GGTAATCTTCCAGAAAATGGTAATTACCTTAACAGATCATCTGAGAATGGGAGTGAAGAG
GCCAAGTCTCAGCATTCAGCAAAATTGACAGATATTGATATTTATGAGAGTTCTCGTTAC
GATGTGCTTCTGCTGAAAGAGGATTTGAAAAACACGAATTGGTTGCACAGTATCGACGAC
AAGTCGGACCAAGAAACCATATTTGGTAACGGATTTGAGTCGCTGCCTGAACCTTTTAGC
CCTTTGCAATATTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004136
PEP Infomation

pacid=37454917 transcript=PGSC0003DMT400005965 locus=PGSC0003DMG400002318 ID=PGSC0003DMT400005965.v4.03 annot-version=v4.03
Sequence

MNRSFRDSLITGKNFPISSQHRRGLSLNGASREPDDNLDLFSKSRRSVSVASSDETDVTV
KLGRLSIGSVKQLKSGLEDLLASTEGEKHDYDWLLTPPGTPLVPTSDGSESKPASVGPRG
SSLGRSASTTKASRLSVSQSESNTPARPTRSNSVTRPSISSSQYCTYSNKSGSILNTSSA
SVSSYIRPSTPTSRSSSSARPSTPTSRATVSRPSTPSKARQAPSTSRPTQSSRPSTPTSR
PQISGNLSTPSRPTSRPSTPTRRTITPSLSPASRSSTPAGRPVTNGRTAASLSRPSSPSP
QVRRPSQPIVPPDFSLETPPNLRTTLPDRPLSAGRSRPNPSVTTKGNAEAPSVANPRRQS
SPIVSRGRLTEPSGRGRVLGSGQLSDISDSRRASHVSELSTRKPVKTAADNMGLGRTISK
KSLDVAIRHMDIRNGINGVRPSSGSTLFPHSIRSTNGKGQPSHGSTGASSFNENASYHYN
GNLPENGNYLNRSSENGSEEAKSQHSAKLTDIDIYESSRYDVLLLKEDLKNTNWLHSIDD
KSDQETIFGNGFESLPEPFSPLQYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005965
Transcript Infomation

pacid=37454917 locus=PGSC0003DMG400002318 ID=PGSC0003DMT400005965.v4.03 annot-version=v4.03
Sequence

ATGAATCGGAGCTTCAGAGATTCTTTGATCACCGGGAAGAATTTCCCTATCTCTTCGCAG
CACCGGCGAGGACTTAGTCTTAATGGAGCTTCTAGGGAGCCCGACGATAATTTGGATCTC
TTCTCCAAAAGTCGCCGGAGTGTTTCTGTTGCCTCCTCCGACGAGACTGATGTTACGGTT
AAGCTGGGAAGGCTTTCAATTGGATCAGTGAAGCAATTAAAGAGTGGATTAGAGGATCTG
TTGGCATCTACGGAAGGAGAGAAACATGATTATGATTGGCTCCTCACTCCTCCAGGAACA
CCTCTTGTTCCTACATCAGATGGAAGTGAATCAAAACCTGCTTCAGTGGGTCCAAGAGGC
AGCTCATTGGGAAGATCTGCTTCCACTACTAAGGCTTCAAGGCTTTCAGTGTCTCAATCA
GAGAGCAATACTCCTGCAAGACCAACTCGGAGTAATTCAGTTACTCGACCTTCCATATCT
AGCTCTCAGTATTGTACTTACTCAAATAAATCAGGCTCTATTCTAAACACAAGCTCTGCA
TCGGTCTCCTCCTATATTAGACCATCTACACCAACCAGCCGTTCATCTTCTTCAGCCAGG
CCTTCCACGCCGACCTCCCGTGCAACAGTGTCCAGACCTTCAACTCCTTCTAAAGCCCGC
CAAGCCCCAAGTACTTCTAGGCCAACCCAGAGCTCTAGACCTTCTACTCCAACATCCCGG
CCCCAAATATCGGGAAACTTGAGTACCCCTTCAAGGCCTACTTCAAGGCCTTCAACACCT
ACTCGTCGGACTATAACACCTTCATTATCTCCAGCATCTAGATCTTCAACTCCAGCAGGG
CGCCCTGTCACCAATGGACGAACTGCAGCTTCTCTTTCTCGTCCAAGCTCCCCTAGTCCC
CAAGTTCGGCGACCATCGCAGCCAATAGTTCCCCCAGATTTTTCACTTGAAACACCACCA
AACCTACGCACAACTCTGCCAGATAGACCTCTGTCTGCTGGCAGGTCCAGGCCAAATCCT
TCTGTCACTACCAAGGGAAATGCAGAAGCCCCAAGTGTTGCAAATCCTCGAAGACAGTCA
TCCCCCATTGTTAGCAGGGGAAGACTAACAGAACCCTCTGGTAGAGGACGAGTGCTTGGC
AGTGGGCAGCTAAGTGATATATCTGATTCCCGCAGGGCTTCACATGTCTCAGAGTTGTCT
ACAAGGAAGCCTGTAAAGACTGCTGCTGATAACATGGGACTTGGAAGGACAATTTCTAAG
AAATCCCTTGACGTGGCAATCAGGCATATGGATATTAGAAATGGCATTAATGGTGTTCGT
CCAAGTTCTGGTTCAACCCTCTTCCCTCACAGTATTCGATCCACAAATGGGAAAGGCCAG
CCTTCTCATGGTTCGACTGGCGCATCCTCTTTCAATGAGAATGCATCTTACCACTACAAT
GGTAATCTTCCAGAAAATGGTAATTACCTTAACAGATCATCTGAGAATGGGAGTGAAGAG
GCCAAGTCTCAGCATTCAGCAAAATTGACAGATATTGATATTTATGAGAGTTCTCGTTAC
GATGTGCTTCTGCTGAAAGAGGATTTGAAAAACACGAATTGGTTGCACAGTATCGACGAC
AAGTCGGACCAAGAAACCATATTTGGTAACGGATTTGAGTCGCTGCCTGAACCTTTTAGC
CCTTTGCAATATTTGTGA