Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005959
CDS Infomation

pacid=37446496 polypeptide=PGSC0003DMP400004132 locus=PGSC0003DMG400002313 ID=PGSC0003DMT400005959.v4.03 annot-version=v4.03
Sequence

ATGCATGCCAGATATCGTGGTCCGGTAAATGGAAATAGGTCTAGTTCAATGGGTGTTGGG
GGTGTGGGAGCTTCACCTGAGCGATTTGCGAGAGGTCGTGGTGAGTATAGAAACTTTAGT
CGGGTTGATTTTGGGCGTGGTCAATCAAAGCAGTTTGGATTGCCACATGGAAATGAAATT
TTCATGGAAGCTGGACGGCTAGCGGCTGAGTACCTTGTTTCCAAGGGAGCGTTGCATCCA
AGTGCTCTTTCAGGGAAATATCAAAATGGTAGCTTAAGGAATCCAGTTGGAGAATTTCAG
GGGTTTAGGTCACAGGAGGCTGATTTTATGGGGGTCCCTGTGGAAGGTCGAATATCAGCT
CTTACTCATTTTGGGAGTGCTGCAGGTGATGTAGGTCATGGTAGGAAAAGGTTTCCGGAG
GAATATAACTCAATGGGTTCAAGAAACTTTGTGAGAGAAAGTAGAAGAAATGAAACTTTT
AAAAATTATGGCTCTGAGTTCAATCGAGAATTAGGAAGAGTTGGGTCATGGAATAGAGTC
AGGAACTCTCCTGATGTGGATGCTCAAGATAATGCTTTTTCAGGGAATAGAGATGAACAG
AAAGTAGCTAAGAATAGTGATGCGGTGTTGCAAAATTCCCCTCCCAGGAAAATAGATCCT
GAGATTGAGAGTTCAGGGGACTCGCTGATTGATTCAGAGCCTGCAGGCCAAAACAAGGCA
GGGGATGATGCAGGTAAAAAGGCAAGTCCTATTAGCACTGAAACTAATCTTCCATCAGAG
GATGAACTACAACATACTGAGAAGTGTATTGAAATGGAAGCCTCAAAAATAGAAGTTGAT
CAGGTTGATGTTTCCAATGATAATGGTGATTTGGAGACAAAAGCTGCCAAGGAGAACATA
GAAGTTAAACCTTGTACTGAAGAACATACGCATACAATCAAGAGTAGTAATAATTTACTT
AGTGTCTGGAGGTTTGAGCATGTTCCCAAGAAAACTCGCTCTTCATTGGCAAATAGAGTT
CTGAAGGTTTTTGATAATGCAGTCATCAAAGATGAGAACACCCGTGAGATGGAGCTTCCT
AAGGATACTCAAATGCATTCAGAACTGAACCATGTGGATGTTTCTGCTGGTGTAATTTCA
TCTCCTCATAGTCATGATGCAAGAAACCTTGATTCTGGCAAGTCGGAACCTCTTGATTTG
GAGGAAGAATCACGTTGTTCTCAAGTCATTAAGCAAGTAAATGAGACGGATTCCTCATCT
CTTGGAGACAGCATGGTAATAAAGGAGGACGAAACAATTGTGGAGTTACCTGGATTTGAA
AGTTGCAGTTCTATTAACTTGGAAAGAGGAGAGAAACGAGCATTAGAGCATGATGATGAT
TGTACAGGGAGAACTAAGAAACCTAGAGAATTGGTTTCATCTACATGTTCTCTCTCAGAT
GGTATTCTGTACCATTCTAATTCCATGGAAGACTGGCCGAATTCACAGGAACCAGGGACT
TCGCACGGAGAGGGAGTGATGTTGTCATTAGATGAGAAGAAGTTGGTTGACATTCCTCTG
ATTACCAAGAGTGATGTGGAGCCAGGCACTGACTTTACAGGAAAACAACTTTTTCCAGGC
TCCTTGAAAACTTGTGACCCCAATCTTTTGGAAGCTTCTGTTGTGAATGAGACTCAAAAT
GCTGATCCTGTTGATATATTCCCAGGGATAACTGGAAGTGTAAAAGAAGAAGCACCAGTC
GATATTGATCTGACCATGAGTAGTAACTGCAATACAGCTCGTCAATATGCTAAATCTTCC
TTTGATCATATTGACATTGAGGTGATTGATTTGGATAATGATTCTGAACAAGAAGACAAG
GCTTTGAATAATCTAGAGACGAGGTCTGAAGTTGTATTTACTGGATCAGATGATTTTTCA
AATAACCCCCATGGTACCGACGATACTCCTGATGTTCAGGATGGTTATGGACTGATGATA
TCAGAATTGCTTGGGAATGATATACCAAGCTGTTCTTCTGTACCAGAAAATATGAATTCT
TTTCACAATGATATGGGCCTGCATAATGGAGAGGCAGTGCTTGGAGATGATGATTCAATA
TATATGTCTTTGGGAGAAATACCGATAAGCTTTCTGACGGCCTGGGAGCAGCAGACACAA
GAATTCGGGAAGCCATTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400004132
PEP Infomation

pacid=37446496 transcript=PGSC0003DMT400005959 locus=PGSC0003DMG400002313 ID=PGSC0003DMT400005959.v4.03 annot-version=v4.03
Sequence

MHARYRGPVNGNRSSSMGVGGVGASPERFARGRGEYRNFSRVDFGRGQSKQFGLPHGNEI
FMEAGRLAAEYLVSKGALHPSALSGKYQNGSLRNPVGEFQGFRSQEADFMGVPVEGRISA
LTHFGSAAGDVGHGRKRFPEEYNSMGSRNFVRESRRNETFKNYGSEFNRELGRVGSWNRV
RNSPDVDAQDNAFSGNRDEQKVAKNSDAVLQNSPPRKIDPEIESSGDSLIDSEPAGQNKA
GDDAGKKASPISTETNLPSEDELQHTEKCIEMEASKIEVDQVDVSNDNGDLETKAAKENI
EVKPCTEEHTHTIKSSNNLLSVWRFEHVPKKTRSSLANRVLKVFDNAVIKDENTREMELP
KDTQMHSELNHVDVSAGVISSPHSHDARNLDSGKSEPLDLEEESRCSQVIKQVNETDSSS
LGDSMVIKEDETIVELPGFESCSSINLERGEKRALEHDDDCTGRTKKPRELVSSTCSLSD
GILYHSNSMEDWPNSQEPGTSHGEGVMLSLDEKKLVDIPLITKSDVEPGTDFTGKQLFPG
SLKTCDPNLLEASVVNETQNADPVDIFPGITGSVKEEAPVDIDLTMSSNCNTARQYAKSS
FDHIDIEVIDLDNDSEQEDKALNNLETRSEVVFTGSDDFSNNPHGTDDTPDVQDGYGLMI
SELLGNDIPSCSSVPENMNSFHNDMGLHNGEAVLGDDDSIYMSLGEIPISFLTAWEQQTQ
EFGKPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400005959
Transcript Infomation

pacid=37446496 locus=PGSC0003DMG400002313 ID=PGSC0003DMT400005959.v4.03 annot-version=v4.03
Sequence

ATGCATGCCAGATATCGTGGTCCGGTAAATGGAAATAGGTCTAGTTCAATGGGTGTTGGG
GGTGTGGGAGCTTCACCTGAGCGATTTGCGAGAGGTCGTGGTGAGTATAGAAACTTTAGT
CGGGTTGATTTTGGGCGTGGTCAATCAAAGCAGTTTGGATTGCCACATGGAAATGAAATT
TTCATGGAAGCTGGACGGCTAGCGGCTGAGTACCTTGTTTCCAAGGGAGCGTTGCATCCA
AGTGCTCTTTCAGGGAAATATCAAAATGGTAGCTTAAGGAATCCAGTTGGAGAATTTCAG
GGGTTTAGGTCACAGGAGGCTGATTTTATGGGGGTCCCTGTGGAAGGTCGAATATCAGCT
CTTACTCATTTTGGGAGTGCTGCAGGTGATGTAGGTCATGGTAGGAAAAGGTTTCCGGAG
GAATATAACTCAATGGGTTCAAGAAACTTTGTGAGAGAAAGTAGAAGAAATGAAACTTTT
AAAAATTATGGCTCTGAGTTCAATCGAGAATTAGGAAGAGTTGGGTCATGGAATAGAGTC
AGGAACTCTCCTGATGTGGATGCTCAAGATAATGCTTTTTCAGGGAATAGAGATGAACAG
AAAGTAGCTAAGAATAGTGATGCGGTGTTGCAAAATTCCCCTCCCAGGAAAATAGATCCT
GAGATTGAGAGTTCAGGGGACTCGCTGATTGATTCAGAGCCTGCAGGCCAAAACAAGGCA
GGGGATGATGCAGGTAAAAAGGCAAGTCCTATTAGCACTGAAACTAATCTTCCATCAGAG
GATGAACTACAACATACTGAGAAGTGTATTGAAATGGAAGCCTCAAAAATAGAAGTTGAT
CAGGTTGATGTTTCCAATGATAATGGTGATTTGGAGACAAAAGCTGCCAAGGAGAACATA
GAAGTTAAACCTTGTACTGAAGAACATACGCATACAATCAAGAGTAGTAATAATTTACTT
AGTGTCTGGAGGTTTGAGCATGTTCCCAAGAAAACTCGCTCTTCATTGGCAAATAGAGTT
CTGAAGGTTTTTGATAATGCAGTCATCAAAGATGAGAACACCCGTGAGATGGAGCTTCCT
AAGGATACTCAAATGCATTCAGAACTGAACCATGTGGATGTTTCTGCTGGTGTAATTTCA
TCTCCTCATAGTCATGATGCAAGAAACCTTGATTCTGGCAAGTCGGAACCTCTTGATTTG
GAGGAAGAATCACGTTGTTCTCAAGTCATTAAGCAAGTAAATGAGACGGATTCCTCATCT
CTTGGAGACAGCATGGTAATAAAGGAGGACGAAACAATTGTGGAGTTACCTGGATTTGAA
AGTTGCAGTTCTATTAACTTGGAAAGAGGAGAGAAACGAGCATTAGAGCATGATGATGAT
TGTACAGGGAGAACTAAGAAACCTAGAGAATTGGTTTCATCTACATGTTCTCTCTCAGAT
GGTATTCTGTACCATTCTAATTCCATGGAAGACTGGCCGAATTCACAGGAACCAGGGACT
TCGCACGGAGAGGGAGTGATGTTGTCATTAGATGAGAAGAAGTTGGTTGACATTCCTCTG
ATTACCAAGAGTGATGTGGAGCCAGGCACTGACTTTACAGGAAAACAACTTTTTCCAGGC
TCCTTGAAAACTTGTGACCCCAATCTTTTGGAAGCTTCTGTTGTGAATGAGACTCAAAAT
GCTGATCCTGTTGATATATTCCCAGGGATAACTGGAAGTGTAAAAGAAGAAGCACCAGTC
GATATTGATCTGACCATGAGTAGTAACTGCAATACAGCTCGTCAATATGCTAAATCTTCC
TTTGATCATATTGACATTGAGGTGATTGATTTGGATAATGATTCTGAACAAGAAGACAAG
GCTTTGAATAATCTAGAGACGAGGTCTGAAGTTGTATTTACTGGATCAGATGATTTTTCA
AATAACCCCCATGGTACCGACGATACTCCTGATGTTCAGGATGGTTATGGACTGATGATA
TCAGAATTGCTTGGGAATGATATACCAAGCTGTTCTTCTGTACCAGAAAATATGAATTCT
TTTCACAATGATATGGGCCTGCATAATGGAGAGGCAGTGCTTGGAGATGATGATTCAATA
TATATGTCTTTGGGAGAAATACCGATAAGCTTTCTGACGGCCTGGGAGCAGCAGACACAA
GAATTCGGGAAGCCATTTTAA