Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005893
CDS Infomation

pacid=37469602 polypeptide=PGSC0003DMP400004081 locus=PGSC0003DMG400002291 ID=PGSC0003DMT400005893.v4.03 annot-version=v4.03
Sequence

ATGAAATCAATCCACCTCCCCCTCGTCACACATCTCCACCATCACAACCTTGACCTAACT
AAAAATAGGGTTCCCATGGTCTATGCCTACCAAGATGTTGTTAAAACCTCAAAGAAATCA
AATAGGCTTGGTGAAAAATTGTCAAACCTTTTAAACATTCAAAAGAATGATCCTCCTCCT
AGTACTCATTCTACTTTGAACAATATTCATGAAGACAAGGCCAACACACCTACCATGTCA
CCTAAGGAGGACATATCCGATCGATGGCGCGACATTCATGGTGTTCATGAATGGGAAGGA
CTTCTTGATCCACTCCACCCTTTGCTTCGTCGAGAAATTGTAAAATATGGTGAATTTGCT
CAAGCAACTTATGATGCATTAGATATTGACTCATTCTCTGAGTATTGTGGAAGTTGCATG
TACAATAGTCATAAATTGTTTGATAAGTCAGGACTTAACAAGAGTGGCTACAAAGTTACA
AAGTACATCTATGCTATGTCACAAATAGATATGCCCCAATGGCTTGAAAGATCAAAATTG
ACATACACATGGAGCAAAGATTCAAATTGGATTGGTTTTGTGGCAGTTAGTGATGATGAA
GAATCGCGCCGAATTGGGAGGAGAGATATTGTTGTGGCATGGAGAGGCACAGTGACACCT
TCAGAATGGTATGAAAATATGCAGAGGAAATTAGAGTCAATTGGACATATGGACTCAAAA
GTAGAACATGGTTTTCTTAGTATTTACACATCTAAGTGTGATTCAACTAGATACAACATA
TCAAGTGCCTCAGAACAAGTCATGAAAGAATTGAAAACATTGGTAGATTTTTACAAAACA
GAAAGTGCTGAACAAGTTAGCCTCACAATAACAGGACATAGCCTAGGGGGTGCACTTGCT
CTACTAAATGCTTATGAATCAGCAGCAAATTTTCCAAAACTTCCAATTAGTGTTATTTCT
TTTGCAGCCCCAAGAGTTGGAAATATTGCATTTCGCGATGAGCTTTATCAAATGGGAGTC
AAAATTTTACGTGTTACAGTGAAACAGGACTTAGTCCCTCGAATGCCCGGAATAGTTTTG
AATGAAAGTCTACAAAAATTCGATGATCTTACTGGGACATTAGAGTGGATTTACACACAT
GTTGGTGCTGAATTGAAGCTTGATGTTAGGTCTTCACCTTATCTTAAAAGGGGGTTCAAT
TTTATAGGGATTCATATGCTTGAGACATACCTTCATTTAGTAGATGGTTTTGTGAGTAGT
AGTTCAACATTTAGGTCTAATGCTAAAAGGGATGTGGCACTGGTGAACAAGGCATGTGAT
ATGCTTGTAGATGAGTTAAGAATTCCTACTTGTTGGTACCAATTGGCCCACAAGGGGTTA
GAGTGTAATTCTTATGGTAGATGGGTAAGGCCCAAAAGAGATCCAGAAGATATTCCTTCA
CCTACTAGCAGGGAAGAAAATACTTATGGTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004081
PEP Infomation

pacid=37469602 transcript=PGSC0003DMT400005893 locus=PGSC0003DMG400002291 ID=PGSC0003DMT400005893.v4.03 annot-version=v4.03
Sequence

MKSIHLPLVTHLHHHNLDLTKNRVPMVYAYQDVVKTSKKSNRLGEKLSNLLNIQKNDPPP
STHSTLNNIHEDKANTPTMSPKEDISDRWRDIHGVHEWEGLLDPLHPLLRREIVKYGEFA
QATYDALDIDSFSEYCGSCMYNSHKLFDKSGLNKSGYKVTKYIYAMSQIDMPQWLERSKL
TYTWSKDSNWIGFVAVSDDEESRRIGRRDIVVAWRGTVTPSEWYENMQRKLESIGHMDSK
VEHGFLSIYTSKCDSTRYNISSASEQVMKELKTLVDFYKTESAEQVSLTITGHSLGGALA
LLNAYESAANFPKLPISVISFAAPRVGNIAFRDELYQMGVKILRVTVKQDLVPRMPGIVL
NESLQKFDDLTGTLEWIYTHVGAELKLDVRSSPYLKRGFNFIGIHMLETYLHLVDGFVSS
SSTFRSNAKRDVALVNKACDMLVDELRIPTCWYQLAHKGLECNSYGRWVRPKRDPEDIPS
PTSREENTYGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400005893
Transcript Infomation

pacid=37469602 locus=PGSC0003DMG400002291 ID=PGSC0003DMT400005893.v4.03 annot-version=v4.03
Sequence

ATGAAATCAATCCACCTCCCCCTCGTCACACATCTCCACCATCACAACCTTGACCTAACT
AAAAATAGGGTTCCCATGGTCTATGCCTACCAAGATGTTGTTAAAACCTCAAAGAAATCA
AATAGGCTTGGTGAAAAATTGTCAAACCTTTTAAACATTCAAAAGAATGATCCTCCTCCT
AGTACTCATTCTACTTTGAACAATATTCATGAAGACAAGGCCAACACACCTACCATGTCA
CCTAAGGAGGACATATCCGATCGATGGCGCGACATTCATGGTGTTCATGAATGGGAAGGA
CTTCTTGATCCACTCCACCCTTTGCTTCGTCGAGAAATTGTAAAATATGGTGAATTTGCT
CAAGCAACTTATGATGCATTAGATATTGACTCATTCTCTGAGTATTGTGGAAGTTGCATG
TACAATAGTCATAAATTGTTTGATAAGTCAGGACTTAACAAGAGTGGCTACAAAGTTACA
AAGTACATCTATGCTATGTCACAAATAGATATGCCCCAATGGCTTGAAAGATCAAAATTG
ACATACACATGGAGCAAAGATTCAAATTGGATTGGTTTTGTGGCAGTTAGTGATGATGAA
GAATCGCGCCGAATTGGGAGGAGAGATATTGTTGTGGCATGGAGAGGCACAGTGACACCT
TCAGAATGGTATGAAAATATGCAGAGGAAATTAGAGTCAATTGGACATATGGACTCAAAA
GTAGAACATGGTTTTCTTAGTATTTACACATCTAAGTGTGATTCAACTAGATACAACATA
TCAAGTGCCTCAGAACAAGTCATGAAAGAATTGAAAACATTGGTAGATTTTTACAAAACA
GAAAGTGCTGAACAAGTTAGCCTCACAATAACAGGACATAGCCTAGGGGGTGCACTTGCT
CTACTAAATGCTTATGAATCAGCAGCAAATTTTCCAAAACTTCCAATTAGTGTTATTTCT
TTTGCAGCCCCAAGAGTTGGAAATATTGCATTTCGCGATGAGCTTTATCAAATGGGAGTC
AAAATTTTACGTGTTACAGTGAAACAGGACTTAGTCCCTCGAATGCCCGGAATAGTTTTG
AATGAAAGTCTACAAAAATTCGATGATCTTACTGGGACATTAGAGTGGATTTACACACAT
GTTGGTGCTGAATTGAAGCTTGATGTTAGGTCTTCACCTTATCTTAAAAGGGGGTTCAAT
TTTATAGGGATTCATATGCTTGAGACATACCTTCATTTAGTAGATGGTTTTGTGAGTAGT
AGTTCAACATTTAGGTCTAATGCTAAAAGGGATGTGGCACTGGTGAACAAGGCATGTGAT
ATGCTTGTAGATGAGTTAAGAATTCCTACTTGTTGGTACCAATTGGCCCACAAGGGGTTA
GAGTGTAATTCTTATGGTAGATGGGTAAGGCCCAAAAGAGATCCAGAAGATATTCCTTCA
CCTACTAGCAGGGAAGAAAATACTTATGGTTTTTGA