Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005752
CDS Infomation

pacid=37442871 polypeptide=PGSC0003DMP400004018 locus=PGSC0003DMG400002248 ID=PGSC0003DMT400005752.v4.03 annot-version=v4.03
Sequence

ATGAGGGAGCTACAGGGTTTATCGCCGTCATCTTACTTCTCCGAGGAATTATGTTTTCGT
GATGAGAGGCAAGTTGGATTTTGGAAGGCAAATAGCCTGCAGAACTACCATGGTCTTAAA
AGTGATGATGCTTTACAAAGAGCTGCTGTTCGTTCATCACCCTTTGAGAATCATATTTCA
TTGGGCTCCCCGACGGCGAAGCATTTTGAACATCATGATTCTCATCTAAAACAAGACAAA
AAAGTTAACAGTATCATAGAAAGACGAGCTGTTGGAATTGAAAGAGCATCCCACTCCTTA
CCTAGAGCTCTTGACTATAACGTGGGTGTAAGATCTATTGTCAGCACTGACTTGGCATCT
TATCCAGCAGAAGACGACAAAATTAGCATATTGGGAGGTCAATATGAGAATGGTCTCTTC
TCGAGCTCATTATCAGAGTTATTCAGTAGAAAATTGCGATTACCGACCAACTATTCCCCA
CATGGTCATTCTGTTGGAGCAGCTGACTCACACTATGAAGAAGAACGTTTTGAGTCCCTT
AAAGAACTTGAGGCCCACGCTATTGGAAATCTTCTCCCTGATGATGATGACTTGCTTGCT
GGGGTTACTGATGGGCTAGACTATGTTGGCCAACCCTATGCTGGTGATGAAACTGAAGAT
CTTGATCTTTTCAGTAGTGTTGGAGGTATGGACCTAGGAGAAGATGGTTCCTCTACAGGA
CAACAAAATTCTGAATATGCTGGGAATTATACTCTGTTGTTGGGCGACTCTAATGCTGCA
ATTGGTGGCCAGAAACCTTTCGAGGAAAATCCATCTAGAACACTCTTTGTAAGAAATATA
AATAGCAGTGTTGAAGATTCTGAACTACAAACTCTTTTTGAGCAATATGGAGATATTCGC
ATGCTATATACAGCATGCAAGCATCGCGGTTTTGTTATGATATCTTATTATGATATTCGA
GCATCACAGAATGCCATGAAAGCTCTTCAGAACAAACCACTGAGACGCAGGAAGCTAGAC
ATACATTTCTCAATTCCCAAGGACAATCCATCAGAAAAAGATGCCAACCAAGGGACTCTC
CTGGTTTTCAACCTTGATTCCTCTGTTTCAAATGATGAACTTCATCAAATATTTGGTGTA
TATGGCAAGATTAAGGAGATCCGCGAGACTCAGCATAGAAGCCATCACAAATTTATAGAG
TTTTATGATATTAGAGCTGCAGAAGCTGCTCTTCGTGCTTTAAACAGGAGTGACGTTGCA
GGGAAGCAGATAATGATTGAAGCAAGCCATCCTGGTGGTACTAGACGGCTGTCGCAGCAA
TTTCCTTCTGAGCTGGAGCAAGATGAACCTGGTCTTTATTTGCAGCAGAATAGTCCTAGC
AGTTTAGCCACTGGATTTTCTGTTCCAGGAGCACTTCCACATGGAGGACATGGTTCGAGT
ATGGAAAATGGATCTTTTCTGGGCAGGCAATCAGCCAGTGGTTCTGCCATTAATTCCTAT
TTGGATAATGCATTTGACTGTGGATTATCATTCAGTGTTCCTAACAGCTTATTGAGGTTG
GAATCTAAGGGGGGTAACCAAGCCAATGTTGGTGAAACTGGCCACCTGCAGAGCCAAATC
AATTTTGACTTTCGGGGCACATCAGGTCTCCATCCTCATTCTCTGCCAGAGTACCATGAT
GGTTTATCTAATGGAACTTCCTCCATTTCTCCGGGCGGCATTTCTGCAACTATGAATATC
AGGCCACTAGAAGCAATAGAAAACCGAAAGTTCTCCAGAGTTGGCCCTAATGGGCAACCG
GTGGAACTAAATGAAGTTTTTACTCCAAATGGAAATGTGAATTGTCCTTCTCCTGGGCAC
CAGTACATGTGGAGTAATTCACATCAATCGCAGCCTCAAGGCATGATGTGGCCAAACTCA
CCAACATATGTAGGTGGGGTCTGTGCTTCTCGCCCTCAACAACTGCATTCAGTTCCAAGG
GCTCCGTCTCACATGCTCAATGCACTTGTACCAATAAACAACCATCATGTGGGTTCAGCA
CCTTCTGTTAATCCATCCCTCTCTCTCTGGGATAGAAGACATGCCTATGCAGGAGAATCT
CCAGATGCATCTGGTTTTCATCCAGGTTCTCTGGGCAGTATGAGGATGTCTGGAAATTCA
CCACATACTTTGGAGTTCATTCCTCATAACGTTTTCTCGCGCACTGGTGGCAGCTGTATA
GACTTGCCAATGTCTTCCAGTAATGTCGGATTGCATTCCCATCAGCAGAGAAGTTTAATG
TTTCCTGGTAGAGGTCAAATAATTCCTATGATCAGTTCATTTGATTCTCCAAATGAAAGG
ATGCGGATCCGTAGAAATGAAGGCAATTCGAGTCAGACTGACAACAAGAAGCAGTTTGAA
CTGGATATTGAACGGATTGCGCGAGGGGACGATAAAAGGACAACCCTAATGATAAAGAAT
ATTCCTAACAAATATACTTCAAAAATGCTTTTGGCTGCAATAGATGAGCGTCACAGAGGA
ACATATGATTTCATCTATCTACCCATTGATTTCAAGAACAAATGCAATGTAGGTTACGCA
TTTATCAACATGACTGAGCCTACTCTTATTGTTCCATTTTATAATGCATTCAATGGAAAG
AAATGGGAAAAATTCAATAGTGAGAAGGTGGCATCACTTGCATATGCTCGCATTCAGGGA
AAATCTGCACTCATTGCTCACTTCCAGAATTCTAGCCTGATGAATGAAGATAAGCGATGC
CGACCAATCCTCTTCCACACTGATGGCCCTAATGCTGGTGATCAGGTGCCGTTTCCCATG
GGTGTAAACATGAGGCCAAGAAGCAGCAAAAATCGGGCTGGCACGAGTGAAGAAAGCTAC
CAAGAGAGCAAGGATTTCATAATTGAAGAGTCTGTGAATGAATCAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400004018
PEP Infomation

pacid=37442871 transcript=PGSC0003DMT400005752 locus=PGSC0003DMG400002248 ID=PGSC0003DMT400005752.v4.03 annot-version=v4.03
Sequence

MRELQGLSPSSYFSEELCFRDERQVGFWKANSLQNYHGLKSDDALQRAAVRSSPFENHIS
LGSPTAKHFEHHDSHLKQDKKVNSIIERRAVGIERASHSLPRALDYNVGVRSIVSTDLAS
YPAEDDKISILGGQYENGLFSSSLSELFSRKLRLPTNYSPHGHSVGAADSHYEEERFESL
KELEAHAIGNLLPDDDDLLAGVTDGLDYVGQPYAGDETEDLDLFSSVGGMDLGEDGSSTG
QQNSEYAGNYTLLLGDSNAAIGGQKPFEENPSRTLFVRNINSSVEDSELQTLFEQYGDIR
MLYTACKHRGFVMISYYDIRASQNAMKALQNKPLRRRKLDIHFSIPKDNPSEKDANQGTL
LVFNLDSSVSNDELHQIFGVYGKIKEIRETQHRSHHKFIEFYDIRAAEAALRALNRSDVA
GKQIMIEASHPGGTRRLSQQFPSELEQDEPGLYLQQNSPSSLATGFSVPGALPHGGHGSS
MENGSFLGRQSASGSAINSYLDNAFDCGLSFSVPNSLLRLESKGGNQANVGETGHLQSQI
NFDFRGTSGLHPHSLPEYHDGLSNGTSSISPGGISATMNIRPLEAIENRKFSRVGPNGQP
VELNEVFTPNGNVNCPSPGHQYMWSNSHQSQPQGMMWPNSPTYVGGVCASRPQQLHSVPR
APSHMLNALVPINNHHVGSAPSVNPSLSLWDRRHAYAGESPDASGFHPGSLGSMRMSGNS
PHTLEFIPHNVFSRTGGSCIDLPMSSSNVGLHSHQQRSLMFPGRGQIIPMISSFDSPNER
MRIRRNEGNSSQTDNKKQFELDIERIARGDDKRTTLMIKNIPNKYTSKMLLAAIDERHRG
TYDFIYLPIDFKNKCNVGYAFINMTEPTLIVPFYNAFNGKKWEKFNSEKVASLAYARIQG
KSALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQVPFPMGVNMRPRSSKNRAGTSEESY
QESKDFIIEESVNESN*

Transcript Sequence

Transcript ID

PGSC0003DMT400005752
Transcript Infomation

pacid=37442871 locus=PGSC0003DMG400002248 ID=PGSC0003DMT400005752.v4.03 annot-version=v4.03
Sequence

ATGAGGGAGCTACAGGGTTTATCGCCGTCATCTTACTTCTCCGAGGAATTATGTTTTCGT
GATGAGAGGCAAGTTGGATTTTGGAAGGCAAATAGCCTGCAGAACTACCATGGTCTTAAA
AGTGATGATGCTTTACAAAGAGCTGCTGTTCGTTCATCACCCTTTGAGAATCATATTTCA
TTGGGCTCCCCGACGGCGAAGCATTTTGAACATCATGATTCTCATCTAAAACAAGACAAA
AAAGTTAACAGTATCATAGAAAGACGAGCTGTTGGAATTGAAAGAGCATCCCACTCCTTA
CCTAGAGCTCTTGACTATAACGTGGGTGTAAGATCTATTGTCAGCACTGACTTGGCATCT
TATCCAGCAGAAGACGACAAAATTAGCATATTGGGAGGTCAATATGAGAATGGTCTCTTC
TCGAGCTCATTATCAGAGTTATTCAGTAGAAAATTGCGATTACCGACCAACTATTCCCCA
CATGGTCATTCTGTTGGAGCAGCTGACTCACACTATGAAGAAGAACGTTTTGAGTCCCTT
AAAGAACTTGAGGCCCACGCTATTGGAAATCTTCTCCCTGATGATGATGACTTGCTTGCT
GGGGTTACTGATGGGCTAGACTATGTTGGCCAACCCTATGCTGGTGATGAAACTGAAGAT
CTTGATCTTTTCAGTAGTGTTGGAGGTATGGACCTAGGAGAAGATGGTTCCTCTACAGGA
CAACAAAATTCTGAATATGCTGGGAATTATACTCTGTTGTTGGGCGACTCTAATGCTGCA
ATTGGTGGCCAGAAACCTTTCGAGGAAAATCCATCTAGAACACTCTTTGTAAGAAATATA
AATAGCAGTGTTGAAGATTCTGAACTACAAACTCTTTTTGAGCAATATGGAGATATTCGC
ATGCTATATACAGCATGCAAGCATCGCGGTTTTGTTATGATATCTTATTATGATATTCGA
GCATCACAGAATGCCATGAAAGCTCTTCAGAACAAACCACTGAGACGCAGGAAGCTAGAC
ATACATTTCTCAATTCCCAAGGACAATCCATCAGAAAAAGATGCCAACCAAGGGACTCTC
CTGGTTTTCAACCTTGATTCCTCTGTTTCAAATGATGAACTTCATCAAATATTTGGTGTA
TATGGCAAGATTAAGGAGATCCGCGAGACTCAGCATAGAAGCCATCACAAATTTATAGAG
TTTTATGATATTAGAGCTGCAGAAGCTGCTCTTCGTGCTTTAAACAGGAGTGACGTTGCA
GGGAAGCAGATAATGATTGAAGCAAGCCATCCTGGTGGTACTAGACGGCTGTCGCAGCAA
TTTCCTTCTGAGCTGGAGCAAGATGAACCTGGTCTTTATTTGCAGCAGAATAGTCCTAGC
AGTTTAGCCACTGGATTTTCTGTTCCAGGAGCACTTCCACATGGAGGACATGGTTCGAGT
ATGGAAAATGGATCTTTTCTGGGCAGGCAATCAGCCAGTGGTTCTGCCATTAATTCCTAT
TTGGATAATGCATTTGACTGTGGATTATCATTCAGTGTTCCTAACAGCTTATTGAGGTTG
GAATCTAAGGGGGGTAACCAAGCCAATGTTGGTGAAACTGGCCACCTGCAGAGCCAAATC
AATTTTGACTTTCGGGGCACATCAGGTCTCCATCCTCATTCTCTGCCAGAGTACCATGAT
GGTTTATCTAATGGAACTTCCTCCATTTCTCCGGGCGGCATTTCTGCAACTATGAATATC
AGGCCACTAGAAGCAATAGAAAACCGAAAGTTCTCCAGAGTTGGCCCTAATGGGCAACCG
GTGGAACTAAATGAAGTTTTTACTCCAAATGGAAATGTGAATTGTCCTTCTCCTGGGCAC
CAGTACATGTGGAGTAATTCACATCAATCGCAGCCTCAAGGCATGATGTGGCCAAACTCA
CCAACATATGTAGGTGGGGTCTGTGCTTCTCGCCCTCAACAACTGCATTCAGTTCCAAGG
GCTCCGTCTCACATGCTCAATGCACTTGTACCAATAAACAACCATCATGTGGGTTCAGCA
CCTTCTGTTAATCCATCCCTCTCTCTCTGGGATAGAAGACATGCCTATGCAGGAGAATCT
CCAGATGCATCTGGTTTTCATCCAGGTTCTCTGGGCAGTATGAGGATGTCTGGAAATTCA
CCACATACTTTGGAGTTCATTCCTCATAACGTTTTCTCGCGCACTGGTGGCAGCTGTATA
GACTTGCCAATGTCTTCCAGTAATGTCGGATTGCATTCCCATCAGCAGAGAAGTTTAATG
TTTCCTGGTAGAGGTCAAATAATTCCTATGATCAGTTCATTTGATTCTCCAAATGAAAGG
ATGCGGATCCGTAGAAATGAAGGCAATTCGAGTCAGACTGACAACAAGAAGCAGTTTGAA
CTGGATATTGAACGGATTGCGCGAGGGGACGATAAAAGGACAACCCTAATGATAAAGAAT
ATTCCTAACAAATATACTTCAAAAATGCTTTTGGCTGCAATAGATGAGCGTCACAGAGGA
ACATATGATTTCATCTATCTACCCATTGATTTCAAGAACAAATGCAATGTAGGTTACGCA
TTTATCAACATGACTGAGCCTACTCTTATTGTTCCATTTTATAATGCATTCAATGGAAAG
AAATGGGAAAAATTCAATAGTGAGAAGGTGGCATCACTTGCATATGCTCGCATTCAGGGA
AAATCTGCACTCATTGCTCACTTCCAGAATTCTAGCCTGATGAATGAAGATAAGCGATGC
CGACCAATCCTCTTCCACACTGATGGCCCTAATGCTGGTGATCAGGTGCCGTTTCCCATG
GGTGTAAACATGAGGCCAAGAAGCAGCAAAAATCGGGCTGGCACGAGTGAAGAAAGCTAC
CAAGAGAGCAAGGATTTCATAATTGAAGAGTCTGTGAATGAATCAAATTGA