Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005718
CDS Infomation

pacid=37470796 polypeptide=PGSC0003DMP400003995 locus=PGSC0003DMG400002237 ID=PGSC0003DMT400005718.v4.03 annot-version=v4.03
Sequence

ATGGGCTCTATAATTCGATATCATAATCTGTTTGAGACTAGACGACTAGTAAGTCTATTG
GGCGTGGTTTTTGGCCTTGCTTTGATGATTCAGTATTTTGGTTTTCCATATGGTTATGCC
CTGTCTTCTTTGTTTACTGCCAATGGGGGTCAAATAAGCAGCTCGCAAAGAGTAGATCAA
TCTGGCAACTTCAGTAGGTCAGACAACTTGAAACATGGTAGCGTTGTGAATGCTACTAAC
ACAAATCTTATTAATGAAACTAAGCTCTCTGATGCAAATGATGAAGAGGTAGAGGATGGT
TCTATGCCTCCAATGAATGAACGTTCTGGTGATACCTTAACTGAGGACGTTGACCCTGAG
GATGAATCCCCTTTTAAGGATTCAAAACTGGACAACAAGTCAAATGTGGAAAGTTTAGGA
AGAAATAGTAGCTTACCTCCAGATAAGGCTGCCGACTCTGAAGATGATTTACAAGCTTCA
AATAGTACATCTGAAAGTTCTTTATTGCGTGTGGTTGATACTGATGGGGGAGGCAGTATT
TCTCCAGCGCCGACGGAAGCTAAGTTGTTGGAGATAAGTCCCACAGCATTGTCTATTGCA
CCACCACCATTGGTTGTAACACCACAGGTCAATCTTGATGCAAAGAAAGAAGCTCCTTTG
ATATCTTCCTACCAGAACATATCTGAAAAAGAAGGAAATACAGGCCATCTACTTGAAAGT
GATAACTTACCTGTGCAAAAACGCACTGACCATGCTCCTACAGCCAGTCATAAATTTCCT
GAAATGAAGGAGTCTAACAAGCCAATAGATAGTGTTGTATCAATAGCTGAAATGAATGTT
ATGCAGCAAGAAACTCGCACATCATTTCGTTCGATGAAACCACGGTGGTCCTCAGATGTA
GATCAAGAACTACTACATGCAAAAAGTGTCATTGAGAATTCTCCTCTAGCAGGAAATGAA
CCTGGCTTATATGCTCCTTTGTATAGAAATTTGTCAATGTTTATGAGGAGCTATGAATTG
ATGGAGCAGATTCTCAAAGTTTACATTTATACAGAAGGTGCAAGACCAGTATTCCATACG
CCAGTGCTTAAAGGAATATATGCTTCTGAGGGTTGGTTTATGAAGCTCCTTAAAAGAAAC
AAGAAATTTGTTACCAAGAACCCCAAAAAGGCTCACTTGTTTTATCTGCCGTTCAGCTCC
CGTATGCTAGAGGAGACCTTATATGTCCCTGATTCTCACAGTCGTAGGAACTTAGTTCGA
TATTTAAGTGATTATCTCGACATCATTATCCAAAGACATAATTTTTGGAACAGGACTGCT
GGAGCTGACCATTTTCTTGTTGCCTGCCATGATTGGGCCCCTGCAGAAACAAAAAGAATC
ATGGCTAATTGCATAAGAGCATTGTGCAATGCTGACATTAAAGAAGGCTTCCAATTCGGT
AAAGATGTATCGCTTCCAGAAACATATATACGTGCAGAAAAGAATCCCCTTAGAGAAATT
GGGGGAAAACGTCTTTCTAAGAGACGAACTCTTGCTTTCTTTGCTGGCAACATGCATGGT
TACCTTCGTCCTATCCTATTGAACAACTGGGAAAACAAAGATCCTGACATGAAGATTTTC
GGCAAGATTAGTAAAGTAAGCTATGTCCAATACATGAAGAGTAGCAAATACTGCATATGT
GCAAAAGGTTATGAAGTCAATAGTCCTCGAGTGGTGGAAGCCATTTTCTACGAGTGTGTC
CCAGTGATAATATCTGACAATTTCATACCCCCATTTTTCGAGACTTTGAACTGGGAGGCT
TTTGCTATTTTTGTTCCAGAAAAGGACATTCCAAAACTGAAAGACATACTCGTATCGATC
CCTGATAGGAGATATCGTGAGATGCAGCGGAGGGTTAAGTTGGTGCAGCAGCATTTCCTT
TGGCACGTCAAGCCCGTAAAGTACGATATTTTTAACATGATTCTCCATTCGATATGGCAC
AACAGAGTTTTTGGAGTAAGAACTAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003995
PEP Infomation

pacid=37470796 transcript=PGSC0003DMT400005718 locus=PGSC0003DMG400002237 ID=PGSC0003DMT400005718.v4.03 annot-version=v4.03
Sequence

MGSIIRYHNLFETRRLVSLLGVVFGLALMIQYFGFPYGYALSSLFTANGGQISSSQRVDQ
SGNFSRSDNLKHGSVVNATNTNLINETKLSDANDEEVEDGSMPPMNERSGDTLTEDVDPE
DESPFKDSKLDNKSNVESLGRNSSLPPDKAADSEDDLQASNSTSESSLLRVVDTDGGGSI
SPAPTEAKLLEISPTALSIAPPPLVVTPQVNLDAKKEAPLISSYQNISEKEGNTGHLLES
DNLPVQKRTDHAPTASHKFPEMKESNKPIDSVVSIAEMNVMQQETRTSFRSMKPRWSSDV
DQELLHAKSVIENSPLAGNEPGLYAPLYRNLSMFMRSYELMEQILKVYIYTEGARPVFHT
PVLKGIYASEGWFMKLLKRNKKFVTKNPKKAHLFYLPFSSRMLEETLYVPDSHSRRNLVR
YLSDYLDIIIQRHNFWNRTAGADHFLVACHDWAPAETKRIMANCIRALCNADIKEGFQFG
KDVSLPETYIRAEKNPLREIGGKRLSKRRTLAFFAGNMHGYLRPILLNNWENKDPDMKIF
GKISKVSYVQYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFIPPFFETLNWEA
FAIFVPEKDIPKLKDILVSIPDRRYREMQRRVKLVQQHFLWHVKPVKYDIFNMILHSIWH
NRVFGVRTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400005718
Transcript Infomation

pacid=37470796 locus=PGSC0003DMG400002237 ID=PGSC0003DMT400005718.v4.03 annot-version=v4.03
Sequence

ATGGGCTCTATAATTCGATATCATAATCTGTTTGAGACTAGACGACTAGTAAGTCTATTG
GGCGTGGTTTTTGGCCTTGCTTTGATGATTCAGTATTTTGGTTTTCCATATGGTTATGCC
CTGTCTTCTTTGTTTACTGCCAATGGGGGTCAAATAAGCAGCTCGCAAAGAGTAGATCAA
TCTGGCAACTTCAGTAGGTCAGACAACTTGAAACATGGTAGCGTTGTGAATGCTACTAAC
ACAAATCTTATTAATGAAACTAAGCTCTCTGATGCAAATGATGAAGAGGTAGAGGATGGT
TCTATGCCTCCAATGAATGAACGTTCTGGTGATACCTTAACTGAGGACGTTGACCCTGAG
GATGAATCCCCTTTTAAGGATTCAAAACTGGACAACAAGTCAAATGTGGAAAGTTTAGGA
AGAAATAGTAGCTTACCTCCAGATAAGGCTGCCGACTCTGAAGATGATTTACAAGCTTCA
AATAGTACATCTGAAAGTTCTTTATTGCGTGTGGTTGATACTGATGGGGGAGGCAGTATT
TCTCCAGCGCCGACGGAAGCTAAGTTGTTGGAGATAAGTCCCACAGCATTGTCTATTGCA
CCACCACCATTGGTTGTAACACCACAGGTCAATCTTGATGCAAAGAAAGAAGCTCCTTTG
ATATCTTCCTACCAGAACATATCTGAAAAAGAAGGAAATACAGGCCATCTACTTGAAAGT
GATAACTTACCTGTGCAAAAACGCACTGACCATGCTCCTACAGCCAGTCATAAATTTCCT
GAAATGAAGGAGTCTAACAAGCCAATAGATAGTGTTGTATCAATAGCTGAAATGAATGTT
ATGCAGCAAGAAACTCGCACATCATTTCGTTCGATGAAACCACGGTGGTCCTCAGATGTA
GATCAAGAACTACTACATGCAAAAAGTGTCATTGAGAATTCTCCTCTAGCAGGAAATGAA
CCTGGCTTATATGCTCCTTTGTATAGAAATTTGTCAATGTTTATGAGGAGCTATGAATTG
ATGGAGCAGATTCTCAAAGTTTACATTTATACAGAAGGTGCAAGACCAGTATTCCATACG
CCAGTGCTTAAAGGAATATATGCTTCTGAGGGTTGGTTTATGAAGCTCCTTAAAAGAAAC
AAGAAATTTGTTACCAAGAACCCCAAAAAGGCTCACTTGTTTTATCTGCCGTTCAGCTCC
CGTATGCTAGAGGAGACCTTATATGTCCCTGATTCTCACAGTCGTAGGAACTTAGTTCGA
TATTTAAGTGATTATCTCGACATCATTATCCAAAGACATAATTTTTGGAACAGGACTGCT
GGAGCTGACCATTTTCTTGTTGCCTGCCATGATTGGGCCCCTGCAGAAACAAAAAGAATC
ATGGCTAATTGCATAAGAGCATTGTGCAATGCTGACATTAAAGAAGGCTTCCAATTCGGT
AAAGATGTATCGCTTCCAGAAACATATATACGTGCAGAAAAGAATCCCCTTAGAGAAATT
GGGGGAAAACGTCTTTCTAAGAGACGAACTCTTGCTTTCTTTGCTGGCAACATGCATGGT
TACCTTCGTCCTATCCTATTGAACAACTGGGAAAACAAAGATCCTGACATGAAGATTTTC
GGCAAGATTAGTAAAGTAAGCTATGTCCAATACATGAAGAGTAGCAAATACTGCATATGT
GCAAAAGGTTATGAAGTCAATAGTCCTCGAGTGGTGGAAGCCATTTTCTACGAGTGTGTC
CCAGTGATAATATCTGACAATTTCATACCCCCATTTTTCGAGACTTTGAACTGGGAGGCT
TTTGCTATTTTTGTTCCAGAAAAGGACATTCCAAAACTGAAAGACATACTCGTATCGATC
CCTGATAGGAGATATCGTGAGATGCAGCGGAGGGTTAAGTTGGTGCAGCAGCATTTCCTT
TGGCACGTCAAGCCCGTAAAGTACGATATTTTTAACATGATTCTCCATTCGATATGGCAC
AACAGAGTTTTTGGAGTAAGAACTAAGTGA