Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005713
CDS Infomation

pacid=37469200 polypeptide=PGSC0003DMP400003990 locus=PGSC0003DMG400002236 ID=PGSC0003DMT400005713.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGACTCTCAAGGTTTACATCTATGCTGAAGGGGAAAGACCCATATTCCATTCC
GGACCTCTCGATGGAATATATGCTTCAGAGGGCTGGTTCATAAAGCTGCTTCAAGAAAAC
AAAGGATTTGCCACTAAGAACCCCAAAAAGGCTCACCTATTTTATTTGCCGATAAGTTTC
CGATTACTAAAGTTGACATTGTACGTGCCTGATTCTCACAACCGTACAAATATAATGCAA
TTTTTAAGTAACTATGTTGATATGATCGCGCAAAAGTATCGTTTCTGGAATAGAACAGAT
GGAGCTGACCATTTTATTGTTGCCTGTCATGACTGGGCCCCTGCGGTGACAGATGAAATT
ATGAGTAATTGCATAAGATCTTTATGCAATGCTGACCTGAGAGGTGGCTTCCAGTTTGGT
AAAGATGTGTCTCTACCACAACCGAACATTCGTTTGAGGACGAACCCTCTTGCTGAACTT
GGAGGAAAGCCAGCTTCCAAACGGCGTACACTTGCTTTCTTTGCTGGACATATGCATGGT
TATCTCCGCCCTATACTACTGAAGCACTGGGAAAACAGAGATCCTGACATGAGGATTTAT
GGTGGAATAACTAAGGCAAGCTATTTACGGTACATGAAGAGCAGCAAATACTGCATATGT
GCAAGAGGTTCTCAAGTCAACTCTCCTAGAGTGGTAGAAGCTATTTACTATGGATGTATC
CCGGTGATCTTATCCGATAACTATGTGCCCCCGCTCTTTGAGACTCTAAACTGGGAATCT
TTTGCTGTATTTGTCCAGGAGAAGGATATCCCAAATTTGAAAAACATACTTCTGTCCATT
TCGGATAAGAAATATAAGCAGATGCATGGAAGAGTTAAGCAGGTGCAACAACATTTTCTC
TGGCACATTAAGCCTTCTAAATATGATGTTTTTCACATGATACTCCATTCAGTTTGGCAC
AACCGAGTTTTTGGAATAAGAGCTAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003990
PEP Infomation

pacid=37469200 transcript=PGSC0003DMT400005713 locus=PGSC0003DMG400002236 ID=PGSC0003DMT400005713.v4.03 annot-version=v4.03
Sequence

MEKTLKVYIYAEGERPIFHSGPLDGIYASEGWFIKLLQENKGFATKNPKKAHLFYLPISF
RLLKLTLYVPDSHNRTNIMQFLSNYVDMIAQKYRFWNRTDGADHFIVACHDWAPAVTDEI
MSNCIRSLCNADLRGGFQFGKDVSLPQPNIRLRTNPLAELGGKPASKRRTLAFFAGHMHG
YLRPILLKHWENRDPDMRIYGGITKASYLRYMKSSKYCICARGSQVNSPRVVEAIYYGCI
PVILSDNYVPPLFETLNWESFAVFVQEKDIPNLKNILLSISDKKYKQMHGRVKQVQQHFL
WHIKPSKYDVFHMILHSVWHNRVFGIRAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400005713
Transcript Infomation

pacid=37469200 locus=PGSC0003DMG400002236 ID=PGSC0003DMT400005713.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGACTCTCAAGGTTTACATCTATGCTGAAGGGGAAAGACCCATATTCCATTCC
GGACCTCTCGATGGAATATATGCTTCAGAGGGCTGGTTCATAAAGCTGCTTCAAGAAAAC
AAAGGATTTGCCACTAAGAACCCCAAAAAGGCTCACCTATTTTATTTGCCGATAAGTTTC
CGATTACTAAAGTTGACATTGTACGTGCCTGATTCTCACAACCGTACAAATATAATGCAA
TTTTTAAGTAACTATGTTGATATGATCGCGCAAAAGTATCGTTTCTGGAATAGAACAGAT
GGAGCTGACCATTTTATTGTTGCCTGTCATGACTGGGCCCCTGCGGTGACAGATGAAATT
ATGAGTAATTGCATAAGATCTTTATGCAATGCTGACCTGAGAGGTGGCTTCCAGTTTGGT
AAAGATGTGTCTCTACCACAACCGAACATTCGTTTGAGGACGAACCCTCTTGCTGAACTT
GGAGGAAAGCCAGCTTCCAAACGGCGTACACTTGCTTTCTTTGCTGGACATATGCATGGT
TATCTCCGCCCTATACTACTGAAGCACTGGGAAAACAGAGATCCTGACATGAGGATTTAT
GGTGGAATAACTAAGGCAAGCTATTTACGGTACATGAAGAGCAGCAAATACTGCATATGT
GCAAGAGGTTCTCAAGTCAACTCTCCTAGAGTGGTAGAAGCTATTTACTATGGATGTATC
CCGGTGATCTTATCCGATAACTATGTGCCCCCGCTCTTTGAGACTCTAAACTGGGAATCT
TTTGCTGTATTTGTCCAGGAGAAGGATATCCCAAATTTGAAAAACATACTTCTGTCCATT
TCGGATAAGAAATATAAGCAGATGCATGGAAGAGTTAAGCAGGTGCAACAACATTTTCTC
TGGCACATTAAGCCTTCTAAATATGATGTTTTTCACATGATACTCCATTCAGTTTGGCAC
AACCGAGTTTTTGGAATAAGAGCTAGGTAA