Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005705
CDS Infomation

pacid=37467953 polypeptide=PGSC0003DMP400003984 locus=PGSC0003DMG400002233 ID=PGSC0003DMT400005705.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTCTCTTCAGAGACCGTACTTTAGGCTATTCCCGGCGAGACTCCACCACCGCC
GCCTCCGCCGCCGTGTCCACCATGTCTTTGGGCAGCGGAGCCACCAGTAGCTCTCGCTTC
TCAACTTCCAGCTCCGCTTTATCTCCACTTCCATCACCATTTCCTGACCTTACTCCATCA
CTCTCCACTACTGACCTCCAAGAAACTGCCTACGAGATCTTTGTAGCTTCTTGCCGGACT
TCCACCGGAAAAGCCTTAACCTACATTCCCTCTAATTCCTCCGATCGATCTCCGTCACCG
TCACCATCAGCGTCTAATACCAATTCGTCTTCACCTTCTATGCAAAGATCTCTTACTTCT
ACTGCTGCTTCTAAAATGAAGAAAGCTTTGGGCCTTCGATCTAGCTCCAGTTCGGGAATT
AAGCGGACTGAGGGTAGCCCGGGCTCTGGTGGAAAGCCCAAGAAGCCTGTAACCATAGGG
GAGCTTATGAGGATCCAAATGAAGGTTTCTGAGAATTTTGATTCGAGAATTCGTAGAGCT
CTTTTGAGAATTACTGCTGGCCAGGTTGGGAGAAGAATCGAGTCAACAGTTCTCCCGCTG
GAGCTCTTACAACAGTTCAAAGCTGCAGATTTTACTGATCAGAGAGAATATGATGCCTGG
CAGAAAAGAAATCTAAAAGTTCTCGAAGCTGGACTTCTTTTACATCCACACATGCCACTG
GATAAGTCGAATTCTGCTGCGCAGAGGCTGCGGCAAATTATTCAAGCTGCCTTAGATCAT
CCGATTGAAACAGGGAGAAACAATGAGTCGATGCAAGTTCTCCGAACAGCTGTAATGGCT
CTTGCTAATAGGTCATCTGATGGATCACTTTTTGATTCATGCCACTGGGCTGATGGTTTG
CCTTTGAATCTCAGACTCTATGAGATACTTCTGGAGGCATGCTTTGATGTAAATGACGAA
GCGTCTATCATAGAGGAAGTTGATGAACTTATGGACCTCATAAAGAAAACTTGGGGAATT
CTCGGACTTAATCAAATGCTTCACAATATTTGCTTTTCATGGGTTTTATTTAATCGTTAT
GTCGCGACTGGTCAAGTTGAGAACGATCTGTTAGAGGCTGCTGATAGTCAGCTAGCTGAA
GTCGCAAAAGATGCAAAGACGACAAAAGATCCTTCATATGCTAAGATCCTGAATTCTACA
TTAACAGCAATGTTGGGATGGGCTGAGAAAAGGCTTCTTGCATACCATGACACTTTTGAT
GCTGGGAATATTGAATCAATGCCAACCATTGTATCTATAGGGGTATCTGCAGCAAAAATT
CTTGTTGAAGATATTTCTAATGAATATCGGCGGCGGCGTAAGGGCGAAGTTGATGTGGCT
CGTAGTAGAATTGACACTTACATCAGGTCATCACTTCGCACTGCATTTGCTCAGTTAATG
GAGAAGGCAGATTCAAGCAGGAGAGCATCAAGACACCAACCAAATCCTCTTCCTGTCCTT
GCCATCCTTGCAAAGGATGTTGGTGAGCAGGCTTCTAAAGAGAAGGAGATTTTTAGTCCC
ATCTTAAAGAGATGGCATCCTTTTGCTGCAGGAGTAGCCGTTGCCACCCTACACGTGTGC
TATGGGAATGAGCTTAAACAATTTGTTTCGAGTATAACAGAATTGACTCCAGATGCTGTA
CAAGTACTGAGAGCAGCAGACAAATTAGAGAAAGATCTTGTGCAGATTGCTGTTGAAGAT
TCAGTGGACAGTGATGATGGTGGAAAGGCAATTATCCGTGAGATGCCGCCATTTGAAGCT
GAAGGTGCAATTGCCAACATGGTGAAAGATTGGATTAAGATGAGAATAGACAGACTCAAG
GAATGGGTTGACAGAAATCTCCAACAAGAGGTCTGGAATCCTCAAGCTAATGAAGGAGGA
TTTGCCCCCTCTGCTGTTGAAGTCCTTAGGATTATTGATGAAACTTTAGACGCATTCTTC
CTGCTGCCAATACCAATGCATCCAGCATTGCTCCCCGACTTAATGAGTGGCCTCGATAGA
TGTCTTCAATATTACGTATCAAAGGCAAAATCTGGCTGTGGATCAAGGAACACATATGTT
CCAACCATGCCTGCACTAACCAGGTGTACGACTGCTACAAAGTTGTGGAAGAAGAAGGAT
AAGACACTTAATACAAAGAGGAACCCACAGGTTGCTACGATGAACAGTGATAACTCATCT
GGGGTGCTGCAGTTGTGTGTACGTATAAATACTTTCCACAGAATTCGGACAGAGCTAGAA
GTTCTTGAGAAGAGAATTATTACCCTTTTGAGGAATTCTGAATCAGCTCATGTAGAAGAC
TTCTCAAATGGGTTAGGAAAGAAGTTTGAAATCTCACCTGCTGCTTGTATTGAGGGGATC
CAACAGCTCTCCGAGGCAGTCGGCTATAGGATTGTCTTTCATGATCTAAGTCCAGTTTTA
TGGGATGGACTGTATATTGGGGAGCCATCTTCTTCTCGCATTGAGCCTTTCCTTCAAGAA
CTTGAGAAGAATCTGACGATCATATCAAACACTGTTAATGAAAGAGTTCGGACTCGAATT
ATTGCAGACATAATGAAAGCATCCTTTGATGGTTTCCTGGTGGTGTTGCTTGCTGGAGGA
CCTTCTAGAATTTTCACGCAGCAGGATTCACAAATTATAGAGGATGATTTCAAGTCCCTG
AAAGATGTTTTCTGGGCAAATGGGGATGGATTGCCTGTGGATATAATAAACAAATCTTCA
ACAACAGTAAGGGATGTACTCCCTCTTTTCCGGACTGATGCAGAGAGCCTCATTGAGAGA
TTCAGGCGATCAACTTTGGAAACTTATGGTTCATCTGCAAAATCTAGGCTTCCCTTGCCC
CCTACCTCAGGGCAATGGAATCCAACTGAACCAAACACCCTGTTACGCGTCTTGTGCTAC
CGAAATGATGACGCTGCTTCCAAGTTCCTTAAAAAGACTTACAACTTGCCTAAGAAACTG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400003984
PEP Infomation

pacid=37467953 transcript=PGSC0003DMT400005705 locus=PGSC0003DMG400002233 ID=PGSC0003DMT400005705.v4.03 annot-version=v4.03
Sequence

MASLFRDRTLGYSRRDSTTAASAAVSTMSLGSGATSSSRFSTSSSALSPLPSPFPDLTPS
LSTTDLQETAYEIFVASCRTSTGKALTYIPSNSSDRSPSPSPSASNTNSSSPSMQRSLTS
TAASKMKKALGLRSSSSSGIKRTEGSPGSGGKPKKPVTIGELMRIQMKVSENFDSRIRRA
LLRITAGQVGRRIESTVLPLELLQQFKAADFTDQREYDAWQKRNLKVLEAGLLLHPHMPL
DKSNSAAQRLRQIIQAALDHPIETGRNNESMQVLRTAVMALANRSSDGSLFDSCHWADGL
PLNLRLYEILLEACFDVNDEASIIEEVDELMDLIKKTWGILGLNQMLHNICFSWVLFNRY
VATGQVENDLLEAADSQLAEVAKDAKTTKDPSYAKILNSTLTAMLGWAEKRLLAYHDTFD
AGNIESMPTIVSIGVSAAKILVEDISNEYRRRRKGEVDVARSRIDTYIRSSLRTAFAQLM
EKADSSRRASRHQPNPLPVLAILAKDVGEQASKEKEIFSPILKRWHPFAAGVAVATLHVC
YGNELKQFVSSITELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPFEA
EGAIANMVKDWIKMRIDRLKEWVDRNLQQEVWNPQANEGGFAPSAVEVLRIIDETLDAFF
LLPIPMHPALLPDLMSGLDRCLQYYVSKAKSGCGSRNTYVPTMPALTRCTTATKLWKKKD
KTLNTKRNPQVATMNSDNSSGVLQLCVRINTFHRIRTELEVLEKRIITLLRNSESAHVED
FSNGLGKKFEISPAACIEGIQQLSEAVGYRIVFHDLSPVLWDGLYIGEPSSSRIEPFLQE
LEKNLTIISNTVNERVRTRIIADIMKASFDGFLVVLLAGGPSRIFTQQDSQIIEDDFKSL
KDVFWANGDGLPVDIINKSSTTVRDVLPLFRTDAESLIERFRRSTLETYGSSAKSRLPLP
PTSGQWNPTEPNTLLRVLCYRNDDAASKFLKKTYNLPKKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005705
Transcript Infomation

pacid=37467953 locus=PGSC0003DMG400002233 ID=PGSC0003DMT400005705.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTCTCTTCAGAGACCGTACTTTAGGCTATTCCCGGCGAGACTCCACCACCGCC
GCCTCCGCCGCCGTGTCCACCATGTCTTTGGGCAGCGGAGCCACCAGTAGCTCTCGCTTC
TCAACTTCCAGCTCCGCTTTATCTCCACTTCCATCACCATTTCCTGACCTTACTCCATCA
CTCTCCACTACTGACCTCCAAGAAACTGCCTACGAGATCTTTGTAGCTTCTTGCCGGACT
TCCACCGGAAAAGCCTTAACCTACATTCCCTCTAATTCCTCCGATCGATCTCCGTCACCG
TCACCATCAGCGTCTAATACCAATTCGTCTTCACCTTCTATGCAAAGATCTCTTACTTCT
ACTGCTGCTTCTAAAATGAAGAAAGCTTTGGGCCTTCGATCTAGCTCCAGTTCGGGAATT
AAGCGGACTGAGGGTAGCCCGGGCTCTGGTGGAAAGCCCAAGAAGCCTGTAACCATAGGG
GAGCTTATGAGGATCCAAATGAAGGTTTCTGAGAATTTTGATTCGAGAATTCGTAGAGCT
CTTTTGAGAATTACTGCTGGCCAGGTTGGGAGAAGAATCGAGTCAACAGTTCTCCCGCTG
GAGCTCTTACAACAGTTCAAAGCTGCAGATTTTACTGATCAGAGAGAATATGATGCCTGG
CAGAAAAGAAATCTAAAAGTTCTCGAAGCTGGACTTCTTTTACATCCACACATGCCACTG
GATAAGTCGAATTCTGCTGCGCAGAGGCTGCGGCAAATTATTCAAGCTGCCTTAGATCAT
CCGATTGAAACAGGGAGAAACAATGAGTCGATGCAAGTTCTCCGAACAGCTGTAATGGCT
CTTGCTAATAGGTCATCTGATGGATCACTTTTTGATTCATGCCACTGGGCTGATGGTTTG
CCTTTGAATCTCAGACTCTATGAGATACTTCTGGAGGCATGCTTTGATGTAAATGACGAA
GCGTCTATCATAGAGGAAGTTGATGAACTTATGGACCTCATAAAGAAAACTTGGGGAATT
CTCGGACTTAATCAAATGCTTCACAATATTTGCTTTTCATGGGTTTTATTTAATCGTTAT
GTCGCGACTGGTCAAGTTGAGAACGATCTGTTAGAGGCTGCTGATAGTCAGCTAGCTGAA
GTCGCAAAAGATGCAAAGACGACAAAAGATCCTTCATATGCTAAGATCCTGAATTCTACA
TTAACAGCAATGTTGGGATGGGCTGAGAAAAGGCTTCTTGCATACCATGACACTTTTGAT
GCTGGGAATATTGAATCAATGCCAACCATTGTATCTATAGGGGTATCTGCAGCAAAAATT
CTTGTTGAAGATATTTCTAATGAATATCGGCGGCGGCGTAAGGGCGAAGTTGATGTGGCT
CGTAGTAGAATTGACACTTACATCAGGTCATCACTTCGCACTGCATTTGCTCAGTTAATG
GAGAAGGCAGATTCAAGCAGGAGAGCATCAAGACACCAACCAAATCCTCTTCCTGTCCTT
GCCATCCTTGCAAAGGATGTTGGTGAGCAGGCTTCTAAAGAGAAGGAGATTTTTAGTCCC
ATCTTAAAGAGATGGCATCCTTTTGCTGCAGGAGTAGCCGTTGCCACCCTACACGTGTGC
TATGGGAATGAGCTTAAACAATTTGTTTCGAGTATAACAGAATTGACTCCAGATGCTGTA
CAAGTACTGAGAGCAGCAGACAAATTAGAGAAAGATCTTGTGCAGATTGCTGTTGAAGAT
TCAGTGGACAGTGATGATGGTGGAAAGGCAATTATCCGTGAGATGCCGCCATTTGAAGCT
GAAGGTGCAATTGCCAACATGGTGAAAGATTGGATTAAGATGAGAATAGACAGACTCAAG
GAATGGGTTGACAGAAATCTCCAACAAGAGGTCTGGAATCCTCAAGCTAATGAAGGAGGA
TTTGCCCCCTCTGCTGTTGAAGTCCTTAGGATTATTGATGAAACTTTAGACGCATTCTTC
CTGCTGCCAATACCAATGCATCCAGCATTGCTCCCCGACTTAATGAGTGGCCTCGATAGA
TGTCTTCAATATTACGTATCAAAGGCAAAATCTGGCTGTGGATCAAGGAACACATATGTT
CCAACCATGCCTGCACTAACCAGGTGTACGACTGCTACAAAGTTGTGGAAGAAGAAGGAT
AAGACACTTAATACAAAGAGGAACCCACAGGTTGCTACGATGAACAGTGATAACTCATCT
GGGGTGCTGCAGTTGTGTGTACGTATAAATACTTTCCACAGAATTCGGACAGAGCTAGAA
GTTCTTGAGAAGAGAATTATTACCCTTTTGAGGAATTCTGAATCAGCTCATGTAGAAGAC
TTCTCAAATGGGTTAGGAAAGAAGTTTGAAATCTCACCTGCTGCTTGTATTGAGGGGATC
CAACAGCTCTCCGAGGCAGTCGGCTATAGGATTGTCTTTCATGATCTAAGTCCAGTTTTA
TGGGATGGACTGTATATTGGGGAGCCATCTTCTTCTCGCATTGAGCCTTTCCTTCAAGAA
CTTGAGAAGAATCTGACGATCATATCAAACACTGTTAATGAAAGAGTTCGGACTCGAATT
ATTGCAGACATAATGAAAGCATCCTTTGATGGTTTCCTGGTGGTGTTGCTTGCTGGAGGA
CCTTCTAGAATTTTCACGCAGCAGGATTCACAAATTATAGAGGATGATTTCAAGTCCCTG
AAAGATGTTTTCTGGGCAAATGGGGATGGATTGCCTGTGGATATAATAAACAAATCTTCA
ACAACAGTAAGGGATGTACTCCCTCTTTTCCGGACTGATGCAGAGAGCCTCATTGAGAGA
TTCAGGCGATCAACTTTGGAAACTTATGGTTCATCTGCAAAATCTAGGCTTCCCTTGCCC
CCTACCTCAGGGCAATGGAATCCAACTGAACCAAACACCCTGTTACGCGTCTTGTGCTAC
CGAAATGATGACGCTGCTTCCAAGTTCCTTAAAAAGACTTACAACTTGCCTAAGAAACTG
TGA