Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005644
CDS Infomation

pacid=37471553 polypeptide=PGSC0003DMP400003943 locus=PGSC0003DMG400002212 ID=PGSC0003DMT400005644.v4.03 annot-version=v4.03
Sequence

ATGGATCCCCCTAAAAATGAAGGGGATATGAAACCAACAAATCTCGAAGAAGTAAAAGAG
GAGGGTCCTCTCTTTTCTTGTAATCTATTTGATGCACAAATGGTTCGAAAGGTAGCACAG
GAATTCCTTACAGGATTAGCCTCCGCTTGTGTTGACAACACGACTGGTGGTTTATTCAAG
AGCCCTGCTTCTATGGCTGTTGATATCAGAAGAGAAATGGTGGACTATCTTATCCAGAGA
AGCGAGACATTTGTTGCTGAATCTGTTGTGTTAGAAGGTGGAACAGAAACCATTGTGTCG
GACAACCCTTATGATAACATTTCGGATTTTATTGATGATTTTGGTCAGTCGAAGAGAAAT
TTTTTTAGCAAGGTTTCAGGTTGGATGCTAAGTGAAAGAAGAGAGGATAGAATAGATGAT
TTTGTACAAGAAATGGAGATAAATGGCTTTTGGTTGATGGCGAGGAGGGAAACCGTAGCA
CAAACAGTGATTCGAAACGTTGATTTCAAAAACACCTTTCACTGCAATATGAAGTTTAAG
TCCGAAGAAGAGCTTGCAAGACATGTCTTTTCGTGTGGTTTCAGGGAAATACACTGTGAA
AATGACGGTTGTAATGCAAGATTTAGTGCAGCTCAACTTGAACAGCATGATTCGGAGTGT
CCTTTCAAAATACTTCAGTGTGAGCAGAAGTGCCCAGAAATGCTCATGAGACGTGAAATG
GACCGGCATTGTATAACTATTTGTACAATGAAGCTTGTCAATTGTCCCTTTTATCCCGTT
GGTTGCCAATCGACTGTTCCCCAATGCAAAGCAGACGAACACCGTAAAGAGAATCTCCAA
TCTCACTTGGTCTACATTTTAAAACTTATTTACAAGGAAGCATCTTCAGAAGCTCTTAAG
AAAAGGGCTGAACAATTGGAACAGGCAACATCAGGTGGACGATTAGCAGCTGCTCGTGAT
GCAAGATCATTAACAACTGCAATTAAGAATATTGATGCAAAGCTTGGACCGTTGGAGGTC
GAGAAAAAGATAGAGGTCAATCCAGAGTTAATAGAACAAAAAGACGAGGGCACTGATGTA
TCCACCAAGAATGACGATCATGATGGTAAGGACTCGCTTCATAAGAATGAGACGTCTCCA
GACTCACCCAAGATTCAGCATGACCTTACAGCTACGCCCGCCAAAGCAGAGTCACCTACC
AAATCAGTGGATATTGTAGAACCAACTAGCAAAACTAAAGTGCAAGAATCTTCTAAGTCA
CCTCAGGACCTCACAGTTTTCTCATCCAAAAGTGAAGAGTCTACCCTCTCACCCATGAAA
CATAAAAAATCTTCCTCACCTGAAATGGATACACATGAAACTAATGAGTCTACACCATCA
CCCAAAAAACACCATGACTCCACAGCTTCCTCACCCAAAATGAGTACACATGAGTCGACT
CCATCACCGAAAAAACACCATGACTCCACAACTTCCTCACCTAAAATGTGTACACACGAG
TCTACAATATCCCCAAAAGAACACCATGACTCCACAGCTTCCTCACCCAAAATGAGTACA
CATGAGCTTACTCTACCAAAGAAACACCATGACTCCATGGCTACCTCACCCAAAATAGGT
ACACATGAGTCTACACCATTACCCAAAAACCAACATGACTCCACAACTTCCTCACCCAAA
ATGAGTACACATGAGTCGACTCCATCACCGAAAAAACACCATGACTCCACAACTTCCTCA
CCTAAAATGTGTACACACGAGTCTACGATATCACCAAAAGAACACCATGACTCCACAGCT
TCCTCACCCAAAATGAGTACACATGAGTTAACTCCATCACCAAAGAAACAACATGACTCC
ACAACTTCCTCACCTAAAATGAGTACACATGAGTCGACTCCATCACCAAAGAAACACCAT
GACTCCACAACTTCCTCACCTAAAGTGAGTACACATGAGTCCACACCATCACCAACTAAA
CACCATAACTCCACGCCATCCTCACTTGAAACGGAGTATGCAAAAAGTGAAGAGTCTATT
CCATCAGCCAATAACCATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003943
PEP Infomation

pacid=37471553 transcript=PGSC0003DMT400005644 locus=PGSC0003DMG400002212 ID=PGSC0003DMT400005644.v4.03 annot-version=v4.03
Sequence

MDPPKNEGDMKPTNLEEVKEEGPLFSCNLFDAQMVRKVAQEFLTGLASACVDNTTGGLFK
SPASMAVDIRREMVDYLIQRSETFVAESVVLEGGTETIVSDNPYDNISDFIDDFGQSKRN
FFSKVSGWMLSERREDRIDDFVQEMEINGFWLMARRETVAQTVIRNVDFKNTFHCNMKFK
SEEELARHVFSCGFREIHCENDGCNARFSAAQLEQHDSECPFKILQCEQKCPEMLMRREM
DRHCITICTMKLVNCPFYPVGCQSTVPQCKADEHRKENLQSHLVYILKLIYKEASSEALK
KRAEQLEQATSGGRLAAARDARSLTTAIKNIDAKLGPLEVEKKIEVNPELIEQKDEGTDV
STKNDDHDGKDSLHKNETSPDSPKIQHDLTATPAKAESPTKSVDIVEPTSKTKVQESSKS
PQDLTVFSSKSEESTLSPMKHKKSSSPEMDTHETNESTPSPKKHHDSTASSPKMSTHEST
PSPKKHHDSTTSSPKMCTHESTISPKEHHDSTASSPKMSTHELTLPKKHHDSMATSPKIG
THESTPLPKNQHDSTTSSPKMSTHESTPSPKKHHDSTTSSPKMCTHESTISPKEHHDSTA
SSPKMSTHELTPSPKKQHDSTTSSPKMSTHESTPSPKKHHDSTTSSPKVSTHESTPSPTK
HHNSTPSSLETEYAKSEESIPSANNH*

Transcript Sequence

Transcript ID

PGSC0003DMT400005644
Transcript Infomation

pacid=37471553 locus=PGSC0003DMG400002212 ID=PGSC0003DMT400005644.v4.03 annot-version=v4.03
Sequence

ATGGATCCCCCTAAAAATGAAGGGGATATGAAACCAACAAATCTCGAAGAAGTAAAAGAG
GAGGGTCCTCTCTTTTCTTGTAATCTATTTGATGCACAAATGGTTCGAAAGGTAGCACAG
GAATTCCTTACAGGATTAGCCTCCGCTTGTGTTGACAACACGACTGGTGGTTTATTCAAG
AGCCCTGCTTCTATGGCTGTTGATATCAGAAGAGAAATGGTGGACTATCTTATCCAGAGA
AGCGAGACATTTGTTGCTGAATCTGTTGTGTTAGAAGGTGGAACAGAAACCATTGTGTCG
GACAACCCTTATGATAACATTTCGGATTTTATTGATGATTTTGGTCAGTCGAAGAGAAAT
TTTTTTAGCAAGGTTTCAGGTTGGATGCTAAGTGAAAGAAGAGAGGATAGAATAGATGAT
TTTGTACAAGAAATGGAGATAAATGGCTTTTGGTTGATGGCGAGGAGGGAAACCGTAGCA
CAAACAGTGATTCGAAACGTTGATTTCAAAAACACCTTTCACTGCAATATGAAGTTTAAG
TCCGAAGAAGAGCTTGCAAGACATGTCTTTTCGTGTGGTTTCAGGGAAATACACTGTGAA
AATGACGGTTGTAATGCAAGATTTAGTGCAGCTCAACTTGAACAGCATGATTCGGAGTGT
CCTTTCAAAATACTTCAGTGTGAGCAGAAGTGCCCAGAAATGCTCATGAGACGTGAAATG
GACCGGCATTGTATAACTATTTGTACAATGAAGCTTGTCAATTGTCCCTTTTATCCCGTT
GGTTGCCAATCGACTGTTCCCCAATGCAAAGCAGACGAACACCGTAAAGAGAATCTCCAA
TCTCACTTGGTCTACATTTTAAAACTTATTTACAAGGAAGCATCTTCAGAAGCTCTTAAG
AAAAGGGCTGAACAATTGGAACAGGCAACATCAGGTGGACGATTAGCAGCTGCTCGTGAT
GCAAGATCATTAACAACTGCAATTAAGAATATTGATGCAAAGCTTGGACCGTTGGAGGTC
GAGAAAAAGATAGAGGTCAATCCAGAGTTAATAGAACAAAAAGACGAGGGCACTGATGTA
TCCACCAAGAATGACGATCATGATGGTAAGGACTCGCTTCATAAGAATGAGACGTCTCCA
GACTCACCCAAGATTCAGCATGACCTTACAGCTACGCCCGCCAAAGCAGAGTCACCTACC
AAATCAGTGGATATTGTAGAACCAACTAGCAAAACTAAAGTGCAAGAATCTTCTAAGTCA
CCTCAGGACCTCACAGTTTTCTCATCCAAAAGTGAAGAGTCTACCCTCTCACCCATGAAA
CATAAAAAATCTTCCTCACCTGAAATGGATACACATGAAACTAATGAGTCTACACCATCA
CCCAAAAAACACCATGACTCCACAGCTTCCTCACCCAAAATGAGTACACATGAGTCGACT
CCATCACCGAAAAAACACCATGACTCCACAACTTCCTCACCTAAAATGTGTACACACGAG
TCTACAATATCCCCAAAAGAACACCATGACTCCACAGCTTCCTCACCCAAAATGAGTACA
CATGAGCTTACTCTACCAAAGAAACACCATGACTCCATGGCTACCTCACCCAAAATAGGT
ACACATGAGTCTACACCATTACCCAAAAACCAACATGACTCCACAACTTCCTCACCCAAA
ATGAGTACACATGAGTCGACTCCATCACCGAAAAAACACCATGACTCCACAACTTCCTCA
CCTAAAATGTGTACACACGAGTCTACGATATCACCAAAAGAACACCATGACTCCACAGCT
TCCTCACCCAAAATGAGTACACATGAGTTAACTCCATCACCAAAGAAACAACATGACTCC
ACAACTTCCTCACCTAAAATGAGTACACATGAGTCGACTCCATCACCAAAGAAACACCAT
GACTCCACAACTTCCTCACCTAAAGTGAGTACACATGAGTCCACACCATCACCAACTAAA
CACCATAACTCCACGCCATCCTCACTTGAAACGGAGTATGCAAAAAGTGAAGAGTCTATT
CCATCAGCCAATAACCATTAG