Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005613
CDS Infomation

pacid=37468681 polypeptide=PGSC0003DMP400003927 locus=PGSC0003DMG400002201 ID=PGSC0003DMT400005613.v4.03 annot-version=v4.03
Sequence

ATGGAAACAGGGACGATCTCTCGACTTCTTCAACCGACTAAGGTTCCAAGTTCCAGTTTT
GCGAATTTCACTTCTAACTCTTCCATATGCTGCTCGCAGAAAAGGTTAATGCCTGCTTGC
CATTCCTCACATGGTGGGCGAGAAATGAATTCTGATGAGCGAGAGATTACAGTTTTATCT
TCTGAACCCACTCTTAAAAAAAGCAGTGTAGTTGGGGGATTGTCTTTACATCGCCCAGTG
CACAAGAGAGATGTAGTTGGCAAGACGTTCTGCTCTGTTGGATTGTCTACGTATCCGGGG
AGCATTGTTGAGTCTTCTTCACAGACAGCTGAAGAAAAGATCGGAGTGCTACTTTTGAAT
CTTGGAGGACCAGACACGCTTCATGATGTCCAGCCTTTTCTGTTCAACTTATTTGCTGAT
CCTGATATTATACGTCTCCCCAGATTGTTCCGATTTCTCCAGCGCCCATTGGCACAACTT
ATATCTGTTCTCCGAGCTCCAAAAAGTAAGGAAGGATATGCTGCAATTGGAGGTGGTTCC
CCTTTACGAAAAATAACAGATGAGCAGGCTAGTGCACTAAAAATGGCGCTAGAAACAAAG
GAAGTCCCGGCTAATGTCTATGTTGCGATGCGGTACTGGCACCCGTTCACCGAGGAAGCT
GTTCACCAGATAAAAAGAGATGGGATTACAAAGCTTGTTGTACTGCCTTTATATCCTCAA
TACTCTATCTCTACAACTGGTTCAAGTGTCCGTGCCCTTCAGAATATTTTCAAAGAAGAC
TCTTATCTGTCCAGACTGCCAGTTGCTGTCATTGAATCCTGGTACCAACGACAAGGTTAC
ATCAAGTCCATGGCAAACTTGATTGAGCAGGAGTTACATAATTTCACTAAGCCTGAGGAG
GTCATGATTTTCTTTAGTGCCCATGGAGTGCCAGTCAGTTATGTTGAAAATGCTGGTGAT
CCATATAGAGATCAGATGGAAGAGTGCATTTTCTTGATAATGAAAGAGCTGAAAGCTAGA
GAAATCAACAATGATCATACGTTGGCTTACCAGAGCCGAGTTGGTCCTGTACAATGGTTG
AAGCCATACACTGATGAAGTTCTTGTTGAGCTTGGACAGAAAGGTGTAAAGTCTCTGTTG
GCTGTTCCTGTAAGCTTTGTGAGCGAGCATATAGAGACTCTTGAAGAGATTGATATGGAA
TACAAGGAGTTAGCACTTGAATCGGGAATTGAAAATTGGGGTCGTGTTCCTGCTCTGAAT
TGCACCTCCTCTTTCATAACTGATCTGGCAGATGCAGTTATTGAAGCATTGCCTTCGACA
ATGGCAATGTCTCCGTCCACTGGTACAGAGGAAGAAGTTGATAATGATCCCATGCAATAT
TTTTTGAAAATGTTTTTCGGATCACTCTTAGCATTTGTTTTTCTGTTTTCACCAAAGATG
GTATCAGCTTTTAAGAAGAACATACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003927
PEP Infomation

pacid=37468681 transcript=PGSC0003DMT400005613 locus=PGSC0003DMG400002201 ID=PGSC0003DMT400005613.v4.03 annot-version=v4.03
Sequence

METGTISRLLQPTKVPSSSFANFTSNSSICCSQKRLMPACHSSHGGREMNSDEREITVLS
SEPTLKKSSVVGGLSLHRPVHKRDVVGKTFCSVGLSTYPGSIVESSSQTAEEKIGVLLLN
LGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQRPLAQLISVLRAPKSKEGYAAIGGGS
PLRKITDEQASALKMALETKEVPANVYVAMRYWHPFTEEAVHQIKRDGITKLVVLPLYPQ
YSISTTGSSVRALQNIFKEDSYLSRLPVAVIESWYQRQGYIKSMANLIEQELHNFTKPEE
VMIFFSAHGVPVSYVENAGDPYRDQMEECIFLIMKELKAREINNDHTLAYQSRVGPVQWL
KPYTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALN
CTSSFITDLADAVIEALPSTMAMSPSTGTEEEVDNDPMQYFLKMFFGSLLAFVFLFSPKM
VSAFKKNIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005613
Transcript Infomation

pacid=37468681 locus=PGSC0003DMG400002201 ID=PGSC0003DMT400005613.v4.03 annot-version=v4.03
Sequence

ATGGAAACAGGGACGATCTCTCGACTTCTTCAACCGACTAAGGTTCCAAGTTCCAGTTTT
GCGAATTTCACTTCTAACTCTTCCATATGCTGCTCGCAGAAAAGGTTAATGCCTGCTTGC
CATTCCTCACATGGTGGGCGAGAAATGAATTCTGATGAGCGAGAGATTACAGTTTTATCT
TCTGAACCCACTCTTAAAAAAAGCAGTGTAGTTGGGGGATTGTCTTTACATCGCCCAGTG
CACAAGAGAGATGTAGTTGGCAAGACGTTCTGCTCTGTTGGATTGTCTACGTATCCGGGG
AGCATTGTTGAGTCTTCTTCACAGACAGCTGAAGAAAAGATCGGAGTGCTACTTTTGAAT
CTTGGAGGACCAGACACGCTTCATGATGTCCAGCCTTTTCTGTTCAACTTATTTGCTGAT
CCTGATATTATACGTCTCCCCAGATTGTTCCGATTTCTCCAGCGCCCATTGGCACAACTT
ATATCTGTTCTCCGAGCTCCAAAAAGTAAGGAAGGATATGCTGCAATTGGAGGTGGTTCC
CCTTTACGAAAAATAACAGATGAGCAGGCTAGTGCACTAAAAATGGCGCTAGAAACAAAG
GAAGTCCCGGCTAATGTCTATGTTGCGATGCGGTACTGGCACCCGTTCACCGAGGAAGCT
GTTCACCAGATAAAAAGAGATGGGATTACAAAGCTTGTTGTACTGCCTTTATATCCTCAA
TACTCTATCTCTACAACTGGTTCAAGTGTCCGTGCCCTTCAGAATATTTTCAAAGAAGAC
TCTTATCTGTCCAGACTGCCAGTTGCTGTCATTGAATCCTGGTACCAACGACAAGGTTAC
ATCAAGTCCATGGCAAACTTGATTGAGCAGGAGTTACATAATTTCACTAAGCCTGAGGAG
GTCATGATTTTCTTTAGTGCCCATGGAGTGCCAGTCAGTTATGTTGAAAATGCTGGTGAT
CCATATAGAGATCAGATGGAAGAGTGCATTTTCTTGATAATGAAAGAGCTGAAAGCTAGA
GAAATCAACAATGATCATACGTTGGCTTACCAGAGCCGAGTTGGTCCTGTACAATGGTTG
AAGCCATACACTGATGAAGTTCTTGTTGAGCTTGGACAGAAAGGTGTAAAGTCTCTGTTG
GCTGTTCCTGTAAGCTTTGTGAGCGAGCATATAGAGACTCTTGAAGAGATTGATATGGAA
TACAAGGAGTTAGCACTTGAATCGGGAATTGAAAATTGGGGTCGTGTTCCTGCTCTGAAT
TGCACCTCCTCTTTCATAACTGATCTGGCAGATGCAGTTATTGAAGCATTGCCTTCGACA
ATGGCAATGTCTCCGTCCACTGGTACAGAGGAAGAAGTTGATAATGATCCCATGCAATAT
TTTTTGAAAATGTTTTTCGGATCACTCTTAGCATTTGTTTTTCTGTTTTCACCAAAGATG
GTATCAGCTTTTAAGAAGAACATACTTTAG