Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005611
CDS Infomation

pacid=37470953 polypeptide=PGSC0003DMP400003925 locus=PGSC0003DMG400002200 ID=PGSC0003DMT400005611.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTTGTTGCGGAGCTGGAGTTATGAGTTCTCTTCAGCAGCCTCTTTGGGTTAAA
GGGTCAGCTTTTCCTTCAAAAGGGGTTACTGGTATTAATGTAAATTCGAGTCGGGTAAAG
TTATGCTCTGTCAAGCCCTGCAGAGCAACTCCAACTGAATGGAGCTTGATAACGGAAAGG
CCTAGTTCTTCTGCTCCTGAAGGTGCTGGGAGCAGCTTTGAAGACTATGGGTTGCATGAA
GCTGATCCTGATGTTCGTGCTATTATTGACAAAGAGAAGCACCGTCAATTTAGGAGCTTA
GAACTTATTGCCTCTGAGAATTTCACATCTCGAGCAGTGATGGAAGCAGTTGGTTCTTGC
CTTACCAACAAATATTCTGAAGGGCTTCCAGGCAAAAGATATTATGGTGGGAATGAATAC
ATCGATGAGTTGGAAACTCTCTGTCAAGAAAGAGCATTGGCTGCCTTTAGCTTAGATGGA
AAACAATGGGGTGTGAATGTTCAACCATTATCTGGTTCTCCGGCAAATTTTGCAGTTTAC
ACAGCGGTTCTTAATCCACATGACCGGATTATGGGATTGGACTTACCTCATGGTGGCCAC
TTGTCCCATGGATTTATGACTCCAAAAAGACGAGTTTCAGGCACCTCGATTTACTTCGAA
TCCATGCCTTATCGACTTGATGAATCTACAGGTATTCTCGATTATGAAATGCTCGAGAAA
ACAGCGAATCTTTTTCGCCCAAAGCTTATTATTGCTGGTGCTAGCGCATATCCGCGTGAT
TTTGATTATCCTTGTCTGAGAAAGATAGCAGATGCTGTTGGAGCTTTCCTAATGATGGAT
ATGGCTCATATCAGTGGGCTTGTAGCTGCCTCTGTACTTGCTAATCCATTTGAATACTGT
GACATTGTTACTACTACTACTCACAAGTCTCTTAGAGGTCCTAGAGGTGGAATGATCTTC
TTCAAAAAAGATCCAGTTCTGGGAATGGATCTGGAATCCGCCATAAACAATGCTGTTTTT
CCTGGTTTGCAGGGTGGTCCCCATAATCACACAATTGGAGGACTAGCCGTTTGCTTGAAG
CATGCCAAATCACCTGAATTTAAGGTTTATCAGAACCAGGTGGTTGCCAACTGTAGAGCA
CTTGCAAGCCGATTAATGGAATTAGGCTACAAGCTGGTCTCAGGAGGGAGTGACAATCAT
TTGGTTCTTGTGGATTTGAGGCCCATGGGAATTGATGGTGCTAGGGTGGAGAAAATACTC
GACATGGCATCAATCACTCTCAATAAGAATTCAGTGCCTGGTGATAAAAGTGCACTAGTA
CCGGGTGGCATCCGCATAGGCTCACCAGCCATGACCACTCGAGGTTTTACAGAGAAGGAA
TTTGTAGCAGTTGCAGATTTCATTCATGAGGGTGTGCAAATTACCCTTGAAGCCAAGAAG
TCCGTCTCTACTACCAAACTCCAAGATTTCATGAAGGTTGTTACATCCCCAGATTTTAAT
TTGATGGATAAGGTGTTGGACTTGCAAGAAAGAGTCGAAGCTTTGACGTCCCAGTACCCT
TTGCCTGGTTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003925
PEP Infomation

pacid=37470953 transcript=PGSC0003DMT400005611 locus=PGSC0003DMG400002200 ID=PGSC0003DMT400005611.v4.03 annot-version=v4.03
Sequence

MEACCGAGVMSSLQQPLWVKGSAFPSKGVTGINVNSSRVKLCSVKPCRATPTEWSLITER
PSSSAPEGAGSSFEDYGLHEADPDVRAIIDKEKHRQFRSLELIASENFTSRAVMEAVGSC
LTNKYSEGLPGKRYYGGNEYIDELETLCQERALAAFSLDGKQWGVNVQPLSGSPANFAVY
TAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGILDYEMLEK
TANLFRPKLIIAGASAYPRDFDYPCLRKIADAVGAFLMMDMAHISGLVAASVLANPFEYC
DIVTTTTHKSLRGPRGGMIFFKKDPVLGMDLESAINNAVFPGLQGGPHNHTIGGLAVCLK
HAKSPEFKVYQNQVVANCRALASRLMELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL
DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVQITLEAKK
SVSTTKLQDFMKVVTSPDFNLMDKVLDLQERVEALTSQYPLPGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005611
Transcript Infomation

pacid=37470953 locus=PGSC0003DMG400002200 ID=PGSC0003DMT400005611.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTTGTTGCGGAGCTGGAGTTATGAGTTCTCTTCAGCAGCCTCTTTGGGTTAAA
GGGTCAGCTTTTCCTTCAAAAGGGGTTACTGGTATTAATGTAAATTCGAGTCGGGTAAAG
TTATGCTCTGTCAAGCCCTGCAGAGCAACTCCAACTGAATGGAGCTTGATAACGGAAAGG
CCTAGTTCTTCTGCTCCTGAAGGTGCTGGGAGCAGCTTTGAAGACTATGGGTTGCATGAA
GCTGATCCTGATGTTCGTGCTATTATTGACAAAGAGAAGCACCGTCAATTTAGGAGCTTA
GAACTTATTGCCTCTGAGAATTTCACATCTCGAGCAGTGATGGAAGCAGTTGGTTCTTGC
CTTACCAACAAATATTCTGAAGGGCTTCCAGGCAAAAGATATTATGGTGGGAATGAATAC
ATCGATGAGTTGGAAACTCTCTGTCAAGAAAGAGCATTGGCTGCCTTTAGCTTAGATGGA
AAACAATGGGGTGTGAATGTTCAACCATTATCTGGTTCTCCGGCAAATTTTGCAGTTTAC
ACAGCGGTTCTTAATCCACATGACCGGATTATGGGATTGGACTTACCTCATGGTGGCCAC
TTGTCCCATGGATTTATGACTCCAAAAAGACGAGTTTCAGGCACCTCGATTTACTTCGAA
TCCATGCCTTATCGACTTGATGAATCTACAGGTATTCTCGATTATGAAATGCTCGAGAAA
ACAGCGAATCTTTTTCGCCCAAAGCTTATTATTGCTGGTGCTAGCGCATATCCGCGTGAT
TTTGATTATCCTTGTCTGAGAAAGATAGCAGATGCTGTTGGAGCTTTCCTAATGATGGAT
ATGGCTCATATCAGTGGGCTTGTAGCTGCCTCTGTACTTGCTAATCCATTTGAATACTGT
GACATTGTTACTACTACTACTCACAAGTCTCTTAGAGGTCCTAGAGGTGGAATGATCTTC
TTCAAAAAAGATCCAGTTCTGGGAATGGATCTGGAATCCGCCATAAACAATGCTGTTTTT
CCTGGTTTGCAGGGTGGTCCCCATAATCACACAATTGGAGGACTAGCCGTTTGCTTGAAG
CATGCCAAATCACCTGAATTTAAGGTTTATCAGAACCAGGTGGTTGCCAACTGTAGAGCA
CTTGCAAGCCGATTAATGGAATTAGGCTACAAGCTGGTCTCAGGAGGGAGTGACAATCAT
TTGGTTCTTGTGGATTTGAGGCCCATGGGAATTGATGGTGCTAGGGTGGAGAAAATACTC
GACATGGCATCAATCACTCTCAATAAGAATTCAGTGCCTGGTGATAAAAGTGCACTAGTA
CCGGGTGGCATCCGCATAGGCTCACCAGCCATGACCACTCGAGGTTTTACAGAGAAGGAA
TTTGTAGCAGTTGCAGATTTCATTCATGAGGGTGTGCAAATTACCCTTGAAGCCAAGAAG
TCCGTCTCTACTACCAAACTCCAAGATTTCATGAAGGTTGTTACATCCCCAGATTTTAAT
TTGATGGATAAGGTGTTGGACTTGCAAGAAAGAGTCGAAGCTTTGACGTCCCAGTACCCT
TTGCCTGGTTTATGA