Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005594
CDS Infomation

pacid=37467264 polypeptide=PGSC0003DMP400003910 locus=PGSC0003DMG400002190 ID=PGSC0003DMT400005594.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCGAAGATTCCAACGGCGATAGTGGTAGCCGCCGTCCGGCGGAGTCTTCGTCA
TCTTCCGATCATAGAAATGGCAATCCACCGTCTACTCCTGATTCTCCGACGTCAGTAGGA
TTCAACACCGATCAGCTTCCTTTCAACACTAGCCAAAACTACTCTGAAGAGGATGAAGCC
TCTGTTGATCCTGATATCATCAGAGACGATCCAGAAGATGCTGACATGGAAGAGGAAGAC
GGAGAAGACCTTTTCAACGACAATTATCTCGATGACTATCAGAGGATGGGTGAGGCTGAC
CAGTACGAGTCGCTCGGATTGGATGATTCCATGGTGGATGAAAGAGATCTGGATCAAATC
ATGGCAGATCGTCAGGCTGCTGAAGTGGAACTTGACAATAGAGATGTACATGTCTCTAAC
CGCAAGCTTCCTCAACTTCTTCATGATCAAGATACTGATGATGACAACTATAGGCCATCA
AAAAGGACTAGAGCTGATTTCAGAAGGAATTTTGATGATACTGATGCAATGCCAAGTTCA
CCAGGGGCATCACAACGAGTAAACTCCAGCCAGGATGTGCCAATGACTGATCAAACTGAT
GATGATCCCTATGAGGATGATGAAAATGATGAAGGGGAGTTTGAGATGTACAGGGTTCAG
GGAACACTTAGGGAATGGGTAACTAGAGATGAAGTCCGGCGTTTCATTGCGAAGAAGTTC
AAGGAATTCTTACTCACATATGTAAACCCAAAAAATGAACATGGGGACTTTGAATATCTT
CGACAGATCAATGAGATGGTATCAGTTAATAAATGCAGCCTTGAGATTGATTACAAACAA
TTCATATATGTCCATCCCAATATTGCCATCTGGCTGGCAGATGCACCACAATCCGTCCTT
GAAGTGATGGAAGAAGTTGCCAACAAAGTTGTCTTTGATCTTCATCCCAACTATAAGCAA
ATTCATCAGAAAGTCTATGTAAGGATTACCAACTTACCAGTTTATGATCAGATTCGTAAT
ATAAGGCAGATCCATTTGAACACCATGATTCGTATTGGTGGAGTCGTTACCCGGCGATCT
GGTGTCTTTCCCCAATTGCAACAAGTGAAATATGACTGTAACAAATGTGGAGCAGTATTG
GGTCCTTTTTTCCAGAACTCATACTCAGAAGTCAAGGTTGGTTCTTGCCCAGAGTGTCAG
TCAAAAGGACCATTCAGTGTCAATGTTGAGCAGACAATATACAGGAACTATCAGAAACTG
ACACTACAAGAAAGCCCAGGAATTGTGCCAGCTGGTCGGCTTCCTAGATACAAGGAAGTG
ATACTGTTGAATGATCTTATTGATTGTGCCCGACCAGGAGAAGAGATAGAAGTCACAGGA
ATCTACACTAACAACTTTGACTTGTCCCTGAATACCAAGAATGGGTTTCCTGTCTTTTCT
ACCGTGATTGAAGCAAATTATGTTACAAAAAAGCAAGACCTCTTTTCAGCTTACAAGCTA
ACTCAGGAGGACAAAGAAGAAATTGAAAAGCTGGCCAAAGACCCTCGGATTGGAGAACGA
ATATTCAAGTCCATTGCCCCGTCAATTTATGGTCATGAAGACATAAAGACTGCCATAGCT
CTTGCAATGTTTGGGGGACAAGAGAAAAATGTTGAAGGGAAACACAGACTGAGAGGAGAC
ATAAATATTCTCCTGCTAGGTGATCCAGGCACTGCAAAATCACAGTTCCTCAAGTATGTC
GAGAAGACGGGACAACGAGCCGTCTATACAACTGGAAAAGGAGCATCTGCTGTAGGGCTT
ACAGCAGCAGTACACAAGGACCCTGTCACTCGGGAATGGACCCTCGAAGGAGGAGCACTA
GTTTTGGCTGATAGAGGAATATGTTTGATTGATGAGTTCGATAAGATGAATGATCAGGAT
AGAGTGAGTATTCATGAAGCAATGGAACAGCAGAGTATTAGCATATCGAAGGCTGGCATT
GTCACATCTCTCCAGGCCCGCTGTTCTGTTATTGCTGCTGCAAATCCTATTGGAGGAAGA
TATGATTCGTCGAAGAATTTCACGCAAAATGTGGAATTGACAGATCCAATCATTTCTCGA
TTTGATGTACTCTGTGTGGTCAAGGATGTGGTTGATCCAGTCACTGATGAGATGCTTGCA
AAGTTTGTTGTTGATAGTCATTTTAGGTCACAAGCAAAAGGTGCTACTATTGATGAGAAG
TCATTTACTGATTCACGGGATGATGCCCGTGCCACTATGGCTGCAACTGATCCTGAGATA
ATTCCTCAAGAGTTGCTAAAGAAGTACTTAACTTATGCAAAGTTGAACGTATTCCCAAAA
TTACATGATGCGGACTTGGACAAGCTCACACAGGTTTATGCTGAATTAAGGAGAGAATCT
TCGCATGGACAAGGAATTCCCATAGCAGTGAGGCACATTGAATCGATGATAAGGATGTCT
GAAGCCCATGCAAGGATGCATCTTAGACAACATGTTACTCAAGAAGATGTGGATATGGCA
ATTCGTGTCCTTCTGGATTCATTTATATCAACCCAGAAATTTGGGGTGCAAAAAGCATTG
CAAAAGAGCTTCAAAAAGTACATGACATACAAAAAAGATTTCAATGCTATCATTCTTCAC
CTCCTACGTGGGCTTGTAAAAGATGCACTGCAGTTTGAGGAAATTGTTTCAGGTTCTGCT
GCCAACCTAGATCATATTGATGTGAAGGTTGAGGAGCTACAAAGCAAGGCACTTGATTAT
GGCATGACTGATCTCAAAGCATTTTTCTCAAGCAATGAATTTACTAAAGCAAACTTTGAG
TTGTACGAGGATCAGGGTATCATAAGACATCGCCTTCCAGCTCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003910
PEP Infomation

pacid=37467264 transcript=PGSC0003DMT400005594 locus=PGSC0003DMG400002190 ID=PGSC0003DMT400005594.v4.03 annot-version=v4.03
Sequence

MAGEDSNGDSGSRRPAESSSSSDHRNGNPPSTPDSPTSVGFNTDQLPFNTSQNYSEEDEA
SVDPDIIRDDPEDADMEEEDGEDLFNDNYLDDYQRMGEADQYESLGLDDSMVDERDLDQI
MADRQAAEVELDNRDVHVSNRKLPQLLHDQDTDDDNYRPSKRTRADFRRNFDDTDAMPSS
PGASQRVNSSQDVPMTDQTDDDPYEDDENDEGEFEMYRVQGTLREWVTRDEVRRFIAKKF
KEFLLTYVNPKNEHGDFEYLRQINEMVSVNKCSLEIDYKQFIYVHPNIAIWLADAPQSVL
EVMEEVANKVVFDLHPNYKQIHQKVYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRS
GVFPQLQQVKYDCNKCGAVLGPFFQNSYSEVKVGSCPECQSKGPFSVNVEQTIYRNYQKL
TLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFS
TVIEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIFKSIAPSIYGHEDIKTAIA
LAMFGGQEKNVEGKHRLRGDINILLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGL
TAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGI
VTSLQARCSVIAAANPIGGRYDSSKNFTQNVELTDPIISRFDVLCVVKDVVDPVTDEMLA
KFVVDSHFRSQAKGATIDEKSFTDSRDDARATMAATDPEIIPQELLKKYLTYAKLNVFPK
LHDADLDKLTQVYAELRRESSHGQGIPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMA
IRVLLDSFISTQKFGVQKALQKSFKKYMTYKKDFNAIILHLLRGLVKDALQFEEIVSGSA
ANLDHIDVKVEELQSKALDYGMTDLKAFFSSNEFTKANFELYEDQGIIRHRLPAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400005594
Transcript Infomation

pacid=37467264 locus=PGSC0003DMG400002190 ID=PGSC0003DMT400005594.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCGAAGATTCCAACGGCGATAGTGGTAGCCGCCGTCCGGCGGAGTCTTCGTCA
TCTTCCGATCATAGAAATGGCAATCCACCGTCTACTCCTGATTCTCCGACGTCAGTAGGA
TTCAACACCGATCAGCTTCCTTTCAACACTAGCCAAAACTACTCTGAAGAGGATGAAGCC
TCTGTTGATCCTGATATCATCAGAGACGATCCAGAAGATGCTGACATGGAAGAGGAAGAC
GGAGAAGACCTTTTCAACGACAATTATCTCGATGACTATCAGAGGATGGGTGAGGCTGAC
CAGTACGAGTCGCTCGGATTGGATGATTCCATGGTGGATGAAAGAGATCTGGATCAAATC
ATGGCAGATCGTCAGGCTGCTGAAGTGGAACTTGACAATAGAGATGTACATGTCTCTAAC
CGCAAGCTTCCTCAACTTCTTCATGATCAAGATACTGATGATGACAACTATAGGCCATCA
AAAAGGACTAGAGCTGATTTCAGAAGGAATTTTGATGATACTGATGCAATGCCAAGTTCA
CCAGGGGCATCACAACGAGTAAACTCCAGCCAGGATGTGCCAATGACTGATCAAACTGAT
GATGATCCCTATGAGGATGATGAAAATGATGAAGGGGAGTTTGAGATGTACAGGGTTCAG
GGAACACTTAGGGAATGGGTAACTAGAGATGAAGTCCGGCGTTTCATTGCGAAGAAGTTC
AAGGAATTCTTACTCACATATGTAAACCCAAAAAATGAACATGGGGACTTTGAATATCTT
CGACAGATCAATGAGATGGTATCAGTTAATAAATGCAGCCTTGAGATTGATTACAAACAA
TTCATATATGTCCATCCCAATATTGCCATCTGGCTGGCAGATGCACCACAATCCGTCCTT
GAAGTGATGGAAGAAGTTGCCAACAAAGTTGTCTTTGATCTTCATCCCAACTATAAGCAA
ATTCATCAGAAAGTCTATGTAAGGATTACCAACTTACCAGTTTATGATCAGATTCGTAAT
ATAAGGCAGATCCATTTGAACACCATGATTCGTATTGGTGGAGTCGTTACCCGGCGATCT
GGTGTCTTTCCCCAATTGCAACAAGTGAAATATGACTGTAACAAATGTGGAGCAGTATTG
GGTCCTTTTTTCCAGAACTCATACTCAGAAGTCAAGGTTGGTTCTTGCCCAGAGTGTCAG
TCAAAAGGACCATTCAGTGTCAATGTTGAGCAGACAATATACAGGAACTATCAGAAACTG
ACACTACAAGAAAGCCCAGGAATTGTGCCAGCTGGTCGGCTTCCTAGATACAAGGAAGTG
ATACTGTTGAATGATCTTATTGATTGTGCCCGACCAGGAGAAGAGATAGAAGTCACAGGA
ATCTACACTAACAACTTTGACTTGTCCCTGAATACCAAGAATGGGTTTCCTGTCTTTTCT
ACCGTGATTGAAGCAAATTATGTTACAAAAAAGCAAGACCTCTTTTCAGCTTACAAGCTA
ACTCAGGAGGACAAAGAAGAAATTGAAAAGCTGGCCAAAGACCCTCGGATTGGAGAACGA
ATATTCAAGTCCATTGCCCCGTCAATTTATGGTCATGAAGACATAAAGACTGCCATAGCT
CTTGCAATGTTTGGGGGACAAGAGAAAAATGTTGAAGGGAAACACAGACTGAGAGGAGAC
ATAAATATTCTCCTGCTAGGTGATCCAGGCACTGCAAAATCACAGTTCCTCAAGTATGTC
GAGAAGACGGGACAACGAGCCGTCTATACAACTGGAAAAGGAGCATCTGCTGTAGGGCTT
ACAGCAGCAGTACACAAGGACCCTGTCACTCGGGAATGGACCCTCGAAGGAGGAGCACTA
GTTTTGGCTGATAGAGGAATATGTTTGATTGATGAGTTCGATAAGATGAATGATCAGGAT
AGAGTGAGTATTCATGAAGCAATGGAACAGCAGAGTATTAGCATATCGAAGGCTGGCATT
GTCACATCTCTCCAGGCCCGCTGTTCTGTTATTGCTGCTGCAAATCCTATTGGAGGAAGA
TATGATTCGTCGAAGAATTTCACGCAAAATGTGGAATTGACAGATCCAATCATTTCTCGA
TTTGATGTACTCTGTGTGGTCAAGGATGTGGTTGATCCAGTCACTGATGAGATGCTTGCA
AAGTTTGTTGTTGATAGTCATTTTAGGTCACAAGCAAAAGGTGCTACTATTGATGAGAAG
TCATTTACTGATTCACGGGATGATGCCCGTGCCACTATGGCTGCAACTGATCCTGAGATA
ATTCCTCAAGAGTTGCTAAAGAAGTACTTAACTTATGCAAAGTTGAACGTATTCCCAAAA
TTACATGATGCGGACTTGGACAAGCTCACACAGGTTTATGCTGAATTAAGGAGAGAATCT
TCGCATGGACAAGGAATTCCCATAGCAGTGAGGCACATTGAATCGATGATAAGGATGTCT
GAAGCCCATGCAAGGATGCATCTTAGACAACATGTTACTCAAGAAGATGTGGATATGGCA
ATTCGTGTCCTTCTGGATTCATTTATATCAACCCAGAAATTTGGGGTGCAAAAAGCATTG
CAAAAGAGCTTCAAAAAGTACATGACATACAAAAAAGATTTCAATGCTATCATTCTTCAC
CTCCTACGTGGGCTTGTAAAAGATGCACTGCAGTTTGAGGAAATTGTTTCAGGTTCTGCT
GCCAACCTAGATCATATTGATGTGAAGGTTGAGGAGCTACAAAGCAAGGCACTTGATTAT
GGCATGACTGATCTCAAAGCATTTTTCTCAAGCAATGAATTTACTAAAGCAAACTTTGAG
TTGTACGAGGATCAGGGTATCATAAGACATCGCCTTCCAGCTCGATGA