Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005587
CDS Infomation

pacid=37465074 polypeptide=PGSC0003DMP400003905 locus=PGSC0003DMG400002186 ID=PGSC0003DMT400005587.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAATCTCTAAAACCTCCAAAACAACCACCAAAAAACCCTAAAAAACAATGG
TCCCTCAACGATTTCGAGATCGGAAAACCCCTCGGAAAAGGCAAATTCGGCCGTGTATAC
CTCGCCCGCGAAGTTAAGAGTGGATTTATAGTGGCCTTGAAAGTCATATTCAAGGAGCAA
ATAGAGAAATACAGGCTGCATCATCAACTTAGGAGGGAAATGGAGATTCAAACCAGCCTT
CGTCATCCCAATGTACTGAGGCTATATGGTTGGTTTCACGATGAGGAGCGGATTTACTTG
ATTTTGGAGTATGCTCATGGCGGTGAGCTGTATAGGGAGCTAAGGAAGACCGGTCGCCTG
TCTGAGAAACAAGCTGCCATATATATTGCAAGTCTCACACAAGCACTAGCGTACTGTCAT
GAGAAGCATGTTATTCACAGGGACATAAAGCCAGAAAACCTGTTACTTGATCATGAGGGT
CGCTTAAAGATTGCAGACTTTGGGTGGTCTGTACAATCTAGAAGCAAGAGACATACAATG
TGCGGAACTCTGGACTATCTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCA
GTTGACAATTGGACCCTGGGGATCCTTTGCTATGAGTTTTTATATGGTGTGCCTCCATTT
GAGGCCGAGAGACAGACCGACACATTCAGAAGAATTATGAAGGTAGACCTCAGCTTCCCT
TCAACACCAGATGTATCTGGTGAAGCTAAGAATCTCATTAGCCAGCTTCTTGTGAAGGAC
TCTTCTAAAAGGCTGTCTCTTCAAAAGATCATGGAGCACCCTTGGATAATTAAGAATGTC
ACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003905
PEP Infomation

pacid=37465074 transcript=PGSC0003DMT400005587 locus=PGSC0003DMG400002186 ID=PGSC0003DMT400005587.v4.03 annot-version=v4.03
Sequence

MASKSLKPPKQPPKNPKKQWSLNDFEIGKPLGKGKFGRVYLAREVKSGFIVALKVIFKEQ
IEKYRLHHQLRREMEIQTSLRHPNVLRLYGWFHDEERIYLILEYAHGGELYRELRKTGRL
SEKQAAIYIASLTQALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTM
CGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAERQTDTFRRIMKVDLSFP
STPDVSGEAKNLISQLLVKDSSKRLSLQKIMEHPWIIKNVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400005587
Transcript Infomation

pacid=37465074 locus=PGSC0003DMG400002186 ID=PGSC0003DMT400005587.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAATCTCTAAAACCTCCAAAACAACCACCAAAAAACCCTAAAAAACAATGG
TCCCTCAACGATTTCGAGATCGGAAAACCCCTCGGAAAAGGCAAATTCGGCCGTGTATAC
CTCGCCCGCGAAGTTAAGAGTGGATTTATAGTGGCCTTGAAAGTCATATTCAAGGAGCAA
ATAGAGAAATACAGGCTGCATCATCAACTTAGGAGGGAAATGGAGATTCAAACCAGCCTT
CGTCATCCCAATGTACTGAGGCTATATGGTTGGTTTCACGATGAGGAGCGGATTTACTTG
ATTTTGGAGTATGCTCATGGCGGTGAGCTGTATAGGGAGCTAAGGAAGACCGGTCGCCTG
TCTGAGAAACAAGCTGCCATATATATTGCAAGTCTCACACAAGCACTAGCGTACTGTCAT
GAGAAGCATGTTATTCACAGGGACATAAAGCCAGAAAACCTGTTACTTGATCATGAGGGT
CGCTTAAAGATTGCAGACTTTGGGTGGTCTGTACAATCTAGAAGCAAGAGACATACAATG
TGCGGAACTCTGGACTATCTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCA
GTTGACAATTGGACCCTGGGGATCCTTTGCTATGAGTTTTTATATGGTGTGCCTCCATTT
GAGGCCGAGAGACAGACCGACACATTCAGAAGAATTATGAAGGTAGACCTCAGCTTCCCT
TCAACACCAGATGTATCTGGTGAAGCTAAGAATCTCATTAGCCAGCTTCTTGTGAAGGAC
TCTTCTAAAAGGCTGTCTCTTCAAAAGATCATGGAGCACCCTTGGATAATTAAGAATGTC
ACATGA