Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005578
CDS Infomation

pacid=37465555 polypeptide=PGSC0003DMP400003898 locus=PGSC0003DMG400002183 ID=PGSC0003DMT400005578.v4.03 annot-version=v4.03
Sequence

ATGGGATCTTATCAACTAATTAGAGAGAAGAAAGATGCAAGATTAAGATGGGATCCACAA
CAAGGGGATGTTATAGTTGAAGGAGAAGGGAAGAATTTATCTTTATCTCCTAGGATTGAG
GTTATTACAAGTGATGCAACAAGTAATAATAATGATTTAGAGTTGTCTTTTCAGAAATCA
CCGACATCTCCTTTGTCTACATTGCCTAAATCTAGTGGTGATCATGGTGGACCTCATTTT
CGTAAGTCTAAGAGTGGAGGGAGTGCTCGTCTTCTTTCTCTTGACATTTTTCGAGGGATC
ACTGTTGCGTTAATGATATTCGTGGAATACGCTGGTGGAATTTATCCTGCTATCAATCAT
TCACCATGGGATGGTATAACCCTGGCAGATTTTGTCATGCCATTTTTCCTCTTCATTGTT
GGAGTGTCGCTTGCACTTGCGTACAAGAACATGCCCTGCAGACTGACTGCGACTGGAAAA
GCAATTCACCGCGCGCTTAAGCTTCTCATCCTTGGACTCTTTCTTCAAGGAGGCTATTTT
CATGGTGTCAAAAATCTAACTTATGGTGTGGACATTGAGAGAATCAGATGGATGGGTATA
TTGCAAAGAATTGCAATATCATTTTTGTTGGCAGCAATGTGTGAAATCTGGCTCAAGGGT
GATAATAAAGTCAATTCAGGACAATCTTTGTTGAAGAGATACCATCAACAATGGGCCATG
GCTATAATGGTTACTGCTTTATACCTTTCTTTGTTCTACGGTTTATATGTTCCTGACTGG
GAATATCAGATGCCAATGGACATATCTTCTTCAGAAGCAAAGATATTCACAGTGAAATGT
GGTGTACGGGGAGACAGTGGACCAGCATGTAATGCTGTTGGAATGATTGACCGAAAAATA
TTGGGTATTCAACACTTATATGAAAGAGCCATTTATGGACGATCAAAAGAATGTAGTGTC
AACTCCCCTAACAACGGTCCCCTTCCTCTAGATGCTCCATCATGGTGTCAAGCCCCTTTC
GACCCAGAAGGACTTTTGAGCTCATTGATGGCTATTGTAACTTGCTTCGTTGGTTTGCAT
TACGGACACATCATTGTTCATTTCAAGGATCATAAAGTTAGAATTCAGCAATGGTTGGTA
CCATCCTCTTGTCTCGTACTGTTGGGTGTAACATGTGATTGCCTCGGGATGCACGCAAAC
AAGGTTTTGTACTCCTTCAGTTATATGTGTATTACTGCTGGCTCTGCTGGCTTTCTCTTC
ACTGCAGTCTATATGATGGTTGATGTGTGGGGCTATAGACACTGGACCACAATACTGAAA
TGGATGGGAACGAACGCGTTGCTGATTTACATTCTTGTATCGTGCAACATCCTGCCCGTT
CTTTTGCAGGGATTCTACTGGAGGCGGCCTGAAAATAATATTCTCACGATGATTGGTGTC
GGACCTAAGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003898
PEP Infomation

pacid=37465555 transcript=PGSC0003DMT400005578 locus=PGSC0003DMG400002183 ID=PGSC0003DMT400005578.v4.03 annot-version=v4.03
Sequence

MGSYQLIREKKDARLRWDPQQGDVIVEGEGKNLSLSPRIEVITSDATSNNNDLELSFQKS
PTSPLSTLPKSSGDHGGPHFRKSKSGGSARLLSLDIFRGITVALMIFVEYAGGIYPAINH
SPWDGITLADFVMPFFLFIVGVSLALAYKNMPCRLTATGKAIHRALKLLILGLFLQGGYF
HGVKNLTYGVDIERIRWMGILQRIAISFLLAAMCEIWLKGDNKVNSGQSLLKRYHQQWAM
AIMVTALYLSLFYGLYVPDWEYQMPMDISSSEAKIFTVKCGVRGDSGPACNAVGMIDRKI
LGIQHLYERAIYGRSKECSVNSPNNGPLPLDAPSWCQAPFDPEGLLSSLMAIVTCFVGLH
YGHIIVHFKDHKVRIQQWLVPSSCLVLLGVTCDCLGMHANKVLYSFSYMCITAGSAGFLF
TAVYMMVDVWGYRHWTTILKWMGTNALLIYILVSCNILPVLLQGFYWRRPENNILTMIGV
GPKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400005578
Transcript Infomation

pacid=37465555 locus=PGSC0003DMG400002183 ID=PGSC0003DMT400005578.v4.03 annot-version=v4.03
Sequence

ATGGGATCTTATCAACTAATTAGAGAGAAGAAAGATGCAAGATTAAGATGGGATCCACAA
CAAGGGGATGTTATAGTTGAAGGAGAAGGGAAGAATTTATCTTTATCTCCTAGGATTGAG
GTTATTACAAGTGATGCAACAAGTAATAATAATGATTTAGAGTTGTCTTTTCAGAAATCA
CCGACATCTCCTTTGTCTACATTGCCTAAATCTAGTGGTGATCATGGTGGACCTCATTTT
CGTAAGTCTAAGAGTGGAGGGAGTGCTCGTCTTCTTTCTCTTGACATTTTTCGAGGGATC
ACTGTTGCGTTAATGATATTCGTGGAATACGCTGGTGGAATTTATCCTGCTATCAATCAT
TCACCATGGGATGGTATAACCCTGGCAGATTTTGTCATGCCATTTTTCCTCTTCATTGTT
GGAGTGTCGCTTGCACTTGCGTACAAGAACATGCCCTGCAGACTGACTGCGACTGGAAAA
GCAATTCACCGCGCGCTTAAGCTTCTCATCCTTGGACTCTTTCTTCAAGGAGGCTATTTT
CATGGTGTCAAAAATCTAACTTATGGTGTGGACATTGAGAGAATCAGATGGATGGGTATA
TTGCAAAGAATTGCAATATCATTTTTGTTGGCAGCAATGTGTGAAATCTGGCTCAAGGGT
GATAATAAAGTCAATTCAGGACAATCTTTGTTGAAGAGATACCATCAACAATGGGCCATG
GCTATAATGGTTACTGCTTTATACCTTTCTTTGTTCTACGGTTTATATGTTCCTGACTGG
GAATATCAGATGCCAATGGACATATCTTCTTCAGAAGCAAAGATATTCACAGTGAAATGT
GGTGTACGGGGAGACAGTGGACCAGCATGTAATGCTGTTGGAATGATTGACCGAAAAATA
TTGGGTATTCAACACTTATATGAAAGAGCCATTTATGGACGATCAAAAGAATGTAGTGTC
AACTCCCCTAACAACGGTCCCCTTCCTCTAGATGCTCCATCATGGTGTCAAGCCCCTTTC
GACCCAGAAGGACTTTTGAGCTCATTGATGGCTATTGTAACTTGCTTCGTTGGTTTGCAT
TACGGACACATCATTGTTCATTTCAAGGATCATAAAGTTAGAATTCAGCAATGGTTGGTA
CCATCCTCTTGTCTCGTACTGTTGGGTGTAACATGTGATTGCCTCGGGATGCACGCAAAC
AAGGTTTTGTACTCCTTCAGTTATATGTGTATTACTGCTGGCTCTGCTGGCTTTCTCTTC
ACTGCAGTCTATATGATGGTTGATGTGTGGGGCTATAGACACTGGACCACAATACTGAAA
TGGATGGGAACGAACGCGTTGCTGATTTACATTCTTGTATCGTGCAACATCCTGCCCGTT
CTTTTGCAGGGATTCTACTGGAGGCGGCCTGAAAATAATATTCTCACGATGATTGGTGTC
GGACCTAAGAAGTAG