Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005560
CDS Infomation

pacid=37455936 polypeptide=PGSC0003DMP400003886 locus=PGSC0003DMG400002176 ID=PGSC0003DMT400005560.v4.03 annot-version=v4.03
Sequence

ATGGCACAAGTGAAGTTGCTAGGTTTTTGGTATAGTCCATTTACTCACAGGGTTGAGTGG
GCTCTAAAGATTAAGGGGGTAAAATATGAATATACAGAAATAGAGCAAGATAAAAAGAAC
CTTCCACGTCTTGAAGATTACCCTAGTTACAAGCAAGTCCCAGTGCTCATTGACAATGAC
AGGTCCATTTGTGGTTCTATGGTCATTCTTGAGTACATCGCCGAGAAATTTGGACGCACT
TCCATTTTGCCTGATGATTTTTGTGACCGTGCTTTAGCTCGTTTTTGGGCTAACTTCCTT
CATAATAAGATGGAAACGGTGAGGAATGCATTCTTAGGCAAAGGAAAGGTGCAAGAGAAA
TCTATAGTGGAAGTTTGTGAGATGTTGAAAATTCTTGGTGATAAGCTCGAAGGCAAAACG
TTCTTTGTGGCTAACGAATTTGGATTTGCTGATATTGTTGCAAATATGGTTGGATTTTGG
CTAGGAGTTTACCAAGAAGTCTCTGGAGTTGAATTAGTGACAGAGAAAAAATTTCCCATT
TTTTGTGTTTGGAGAGATAAGTATGTTAATTGCAGTCAAGTCAAGAAATATCTACCTTCA
AGAGATAAATTGATTGCTTTTTACCAAGCTTCCGCTCGCCCTCAAGCTGCAGCTTCTGCT
TCTACTCAAGCATTGAGCATAGTTACAGGTCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003886
PEP Infomation

pacid=37455936 transcript=PGSC0003DMT400005560 locus=PGSC0003DMG400002176 ID=PGSC0003DMT400005560.v4.03 annot-version=v4.03
Sequence

MAQVKLLGFWYSPFTHRVEWALKIKGVKYEYTEIEQDKKNLPRLEDYPSYKQVPVLIDND
RSICGSMVILEYIAEKFGRTSILPDDFCDRALARFWANFLHNKMETVRNAFLGKGKVQEK
SIVEVCEMLKILGDKLEGKTFFVANEFGFADIVANMVGFWLGVYQEVSGVELVTEKKFPI
FCVWRDKYVNCSQVKKYLPSRDKLIAFYQASARPQAAASASTQALSIVTGP*

Transcript Sequence

Transcript ID

PGSC0003DMT400005560
Transcript Infomation

pacid=37455936 locus=PGSC0003DMG400002176 ID=PGSC0003DMT400005560.v4.03 annot-version=v4.03
Sequence

ATGGCACAAGTGAAGTTGCTAGGTTTTTGGTATAGTCCATTTACTCACAGGGTTGAGTGG
GCTCTAAAGATTAAGGGGGTAAAATATGAATATACAGAAATAGAGCAAGATAAAAAGAAC
CTTCCACGTCTTGAAGATTACCCTAGTTACAAGCAAGTCCCAGTGCTCATTGACAATGAC
AGGTCCATTTGTGGTTCTATGGTCATTCTTGAGTACATCGCCGAGAAATTTGGACGCACT
TCCATTTTGCCTGATGATTTTTGTGACCGTGCTTTAGCTCGTTTTTGGGCTAACTTCCTT
CATAATAAGATGGAAACGGTGAGGAATGCATTCTTAGGCAAAGGAAAGGTGCAAGAGAAA
TCTATAGTGGAAGTTTGTGAGATGTTGAAAATTCTTGGTGATAAGCTCGAAGGCAAAACG
TTCTTTGTGGCTAACGAATTTGGATTTGCTGATATTGTTGCAAATATGGTTGGATTTTGG
CTAGGAGTTTACCAAGAAGTCTCTGGAGTTGAATTAGTGACAGAGAAAAAATTTCCCATT
TTTTGTGTTTGGAGAGATAAGTATGTTAATTGCAGTCAAGTCAAGAAATATCTACCTTCA
AGAGATAAATTGATTGCTTTTTACCAAGCTTCCGCTCGCCCTCAAGCTGCAGCTTCTGCT
TCTACTCAAGCATTGAGCATAGTTACAGGTCCTTAA