Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005512
CDS Infomation

pacid=37450063 polypeptide=PGSC0003DMP400003853 locus=PGSC0003DMG400002153 ID=PGSC0003DMT400005512.v4.03 annot-version=v4.03
Sequence

ATGTCTTCGTACTGGTGTTACCGGTGTACAAGGTTTGTTAGAATTTCAGTTGGGAACGAT
GTTGTTTGTCCTCACTGTGATAGTGGATTTATAGAAGTTGCTGAGGCAAATATTGGGTCG
CCGGAATCTCGCCGGAGGTTTCCCATGTGGAACGAACGGCCAGAGTCAGATCGGAGTGTG
AACATGGGTTCTCGACGGAGCAGGCGTAATCGGGGTGATAGATCTCCGTTTAATCCGGTT
ATTGTTCTTCGTAGTCCATCTGAAGCTCCTGGGGAGGATGAAGCTGCTGCAGCTGCAGAG
GAGCGGAGTTACGAGCTTTATTATGATGATGGTGAAGGTTCAGGTCTCAGGCCGTTGCCG
CCGACGATGTCGGAGTTTTTGATGGGATCTGGGTTTGATCGGTTACTTGATCAGTTAGCA
CAGATCGAGGTGAACGGTTTTAGTCGGCCGGAAAATCCACCGGCGTCGAAATCAGCGATT
GAATCGATGCCGATTATTCAAATAGCTTGTACTCACGTAAATTCCGAGACCCATTGCGCT
GTTTGTAAAGAAGCTTTCGATTTAGGATCTGAAGCTCGAGAAATGCCCTGTAAACACATC
TACCATTCCGATTGTATTCTTCCATGGCTATCTCTTCGAAATTCGTGCCCCGTTTGCCGA
CACGAATTACCGGCGGAATCAACGGAAACTACAAACTCCGACAACATTGCTAGACCTAGA
AACGAAGAAGAAGCAATGGGATTGACAATATGGAGACTTCCAGGAGGTGGGTTCGCCGTG
GGAAGATTTTCCGGTGGAAGAAGAGGAGCTGAGAGGGAACTTCCGGTAGTGTATACAGAG
ATGGACGGTGGATTTAACAATGGGGTACCTAGAAGAATAGCTTGGAGATCAAGAAGGAGC
AATACAGGTCGAAATGGCAGTGGAATAAGCCGAATTTTCAACAACTTCACATCATTTTTC
CGGCGATTAACACCATCTTCTCAACGCCGATCTCTATCCATACATTCCAGTAGTTCCGAA
TCATCGGGTTCTGGTTCTGGATCTGCTGTTTTCAGGAGTCGGAGTGTGTCTTCTTCAAGC
AGCTCAATATTCAGTAGGTATTTGAGAAGAAGCAGAAGAAATTGGGTACCTGAAGAGCAT
AATGGAGTAACCAGATGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003853
PEP Infomation

pacid=37450063 transcript=PGSC0003DMT400005512 locus=PGSC0003DMG400002153 ID=PGSC0003DMT400005512.v4.03 annot-version=v4.03
Sequence

MSSYWCYRCTRFVRISVGNDVVCPHCDSGFIEVAEANIGSPESRRRFPMWNERPESDRSV
NMGSRRSRRNRGDRSPFNPVIVLRSPSEAPGEDEAAAAAEERSYELYYDDGEGSGLRPLP
PTMSEFLMGSGFDRLLDQLAQIEVNGFSRPENPPASKSAIESMPIIQIACTHVNSETHCA
VCKEAFDLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPAESTETTNSDNIARPR
NEEEAMGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGVPRRIAWRSRRS
NTGRNGSGISRIFNNFTSFFRRLTPSSQRRSLSIHSSSSESSGSGSGSAVFRSRSVSSSS
SSIFSRYLRRSRRNWVPEEHNGVTRW*

Transcript Sequence

Transcript ID

PGSC0003DMT400005512
Transcript Infomation

pacid=37450063 locus=PGSC0003DMG400002153 ID=PGSC0003DMT400005512.v4.03 annot-version=v4.03
Sequence

ATGTCTTCGTACTGGTGTTACCGGTGTACAAGGTTTGTTAGAATTTCAGTTGGGAACGAT
GTTGTTTGTCCTCACTGTGATAGTGGATTTATAGAAGTTGCTGAGGCAAATATTGGGTCG
CCGGAATCTCGCCGGAGGTTTCCCATGTGGAACGAACGGCCAGAGTCAGATCGGAGTGTG
AACATGGGTTCTCGACGGAGCAGGCGTAATCGGGGTGATAGATCTCCGTTTAATCCGGTT
ATTGTTCTTCGTAGTCCATCTGAAGCTCCTGGGGAGGATGAAGCTGCTGCAGCTGCAGAG
GAGCGGAGTTACGAGCTTTATTATGATGATGGTGAAGGTTCAGGTCTCAGGCCGTTGCCG
CCGACGATGTCGGAGTTTTTGATGGGATCTGGGTTTGATCGGTTACTTGATCAGTTAGCA
CAGATCGAGGTGAACGGTTTTAGTCGGCCGGAAAATCCACCGGCGTCGAAATCAGCGATT
GAATCGATGCCGATTATTCAAATAGCTTGTACTCACGTAAATTCCGAGACCCATTGCGCT
GTTTGTAAAGAAGCTTTCGATTTAGGATCTGAAGCTCGAGAAATGCCCTGTAAACACATC
TACCATTCCGATTGTATTCTTCCATGGCTATCTCTTCGAAATTCGTGCCCCGTTTGCCGA
CACGAATTACCGGCGGAATCAACGGAAACTACAAACTCCGACAACATTGCTAGACCTAGA
AACGAAGAAGAAGCAATGGGATTGACAATATGGAGACTTCCAGGAGGTGGGTTCGCCGTG
GGAAGATTTTCCGGTGGAAGAAGAGGAGCTGAGAGGGAACTTCCGGTAGTGTATACAGAG
ATGGACGGTGGATTTAACAATGGGGTACCTAGAAGAATAGCTTGGAGATCAAGAAGGAGC
AATACAGGTCGAAATGGCAGTGGAATAAGCCGAATTTTCAACAACTTCACATCATTTTTC
CGGCGATTAACACCATCTTCTCAACGCCGATCTCTATCCATACATTCCAGTAGTTCCGAA
TCATCGGGTTCTGGTTCTGGATCTGCTGTTTTCAGGAGTCGGAGTGTGTCTTCTTCAAGC
AGCTCAATATTCAGTAGGTATTTGAGAAGAAGCAGAAGAAATTGGGTACCTGAAGAGCAT
AATGGAGTAACCAGATGGTAA