Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005510
CDS Infomation

pacid=37453375 polypeptide=PGSC0003DMP400003852 locus=PGSC0003DMG400002152 ID=PGSC0003DMT400005510.v4.03 annot-version=v4.03
Sequence

ATGTCGATCGTGCGTAATTTTTTTTCAAGCCCCACAAGATTATCATCCGTCGTTCTGACT
ATCCTAGCTCTTGTCGTCTACGCTATAAGCCCCCCTGATGACTCATGGGTTGTTGTGGGC
GTCATTGCTGTACATGTTGTCCCGGTGATACTAGTCGTTATGATATATGAAATTTGTTCT
ATACGTCAAGCTAGAGACAGAGCAAGGATTGCATCCGTTAACCACTTGATTGATTGTGAT
GAACTCCATCACTATGTGCCTCCATTAGAAGCATTTCCCACCAGAAGACGATTGCAAGAC
CTGAGGCTCCAAATTGCTCTTCTAAATCGTGAAGTTGATGAGTTTGAACACCATACCTAC
GGAGAGTTGTCTTCTGCTAATATCTTCGGAATTCCCTCCATGAATGACGAAGAGATAAAT
GCTTTACCTGTTCACAGTTGCAAAGACACTTGTCTAGAGAGTGAGGATGCACCACCGAAA
CAGGCCTCATCTTCTTCAACCTCAGCCTTAGCCTTAGACCAGGAATCTATGACAATAGGT
ATGCCAGACGACGATGGTTCATCTGATGAATTGATATGTAATATTTGTTTGGAGCCAGTT
ATTGAGGGAGACCTTGTTTGTTGCTTTCCATGTATCCATCAGTTTCACGCTGCATGCCTT
GATAAATGGCTCGTGTTGAGTTCTTCCTGTCCAGTCTGTAACTTATGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003852
PEP Infomation

pacid=37453375 transcript=PGSC0003DMT400005510 locus=PGSC0003DMG400002152 ID=PGSC0003DMT400005510.v4.03 annot-version=v4.03
Sequence

MSIVRNFFSSPTRLSSVVLTILALVVYAISPPDDSWVVVGVIAVHVVPVILVVMIYEICS
IRQARDRARIASVNHLIDCDELHHYVPPLEAFPTRRRLQDLRLQIALLNREVDEFEHHTY
GELSSANIFGIPSMNDEEINALPVHSCKDTCLESEDAPPKQASSSSTSALALDQESMTIG
MPDDDGSSDELICNICLEPVIEGDLVCCFPCIHQFHAACLDKWLVLSSSCPVCNLC*

Transcript Sequence

Transcript ID

PGSC0003DMT400005510
Transcript Infomation

pacid=37453375 locus=PGSC0003DMG400002152 ID=PGSC0003DMT400005510.v4.03 annot-version=v4.03
Sequence

ATGTCGATCGTGCGTAATTTTTTTTCAAGCCCCACAAGATTATCATCCGTCGTTCTGACT
ATCCTAGCTCTTGTCGTCTACGCTATAAGCCCCCCTGATGACTCATGGGTTGTTGTGGGC
GTCATTGCTGTACATGTTGTCCCGGTGATACTAGTCGTTATGATATATGAAATTTGTTCT
ATACGTCAAGCTAGAGACAGAGCAAGGATTGCATCCGTTAACCACTTGATTGATTGTGAT
GAACTCCATCACTATGTGCCTCCATTAGAAGCATTTCCCACCAGAAGACGATTGCAAGAC
CTGAGGCTCCAAATTGCTCTTCTAAATCGTGAAGTTGATGAGTTTGAACACCATACCTAC
GGAGAGTTGTCTTCTGCTAATATCTTCGGAATTCCCTCCATGAATGACGAAGAGATAAAT
GCTTTACCTGTTCACAGTTGCAAAGACACTTGTCTAGAGAGTGAGGATGCACCACCGAAA
CAGGCCTCATCTTCTTCAACCTCAGCCTTAGCCTTAGACCAGGAATCTATGACAATAGGT
ATGCCAGACGACGATGGTTCATCTGATGAATTGATATGTAATATTTGTTTGGAGCCAGTT
ATTGAGGGAGACCTTGTTTGTTGCTTTCCATGTATCCATCAGTTTCACGCTGCATGCCTT
GATAAATGGCTCGTGTTGAGTTCTTCCTGTCCAGTCTGTAACTTATGCTGA