Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005493
CDS Infomation

pacid=37451291 polypeptide=PGSC0003DMP400003839 locus=PGSC0003DMG400002146 ID=PGSC0003DMT400005493.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAACTCTTACTTCAAATTCATTTCTCCTTTCAACTACACCTCATCCAAGATTA
TCATTCAAAAATCCAAGATTCACTGTTTCTGCTAAAAAATCTGGACAAAATCAAGAAACT
ACAAACAATTCTGGCAACCCCTTCAACTTTGATTTCGGTAAGTTGCCTGATGTGACGTCT
TTGATACCTGCTAGCACGAACACATCTTCTGGATTGTCTTTTGGAAGGCAAAGGGCAAAG
GATCCTGGAACAGTGTTTGTTGCTGGTGCAACTGGGCAAGCTGGTATCCGCATTGCACAG
TTGCTGTTGCGTGAAGGTTATAGTGTCAGAGCTGGAGTTTCTGACCTTGGTGCTGCACAA
GAGCTAGCTCGTCTAGCCGTTAGCTACAAGGTAATCTCTAACGATGAGTCAAAACGCCTG
AATGCAGTTGCATCCACATTTCAAGATGCAGAATCGATTGCAAAGGCAATCGGAAATGCT
AGCAAAGTTGTGGTTACTATTGGTAAGGGAGAAAACGGTCCTGCGACTGAAGTCACCACA
ACAGATGCTGTACAAGTTATACAAGCTGCACAATTAGCTGGTGTTGGGCATGTGGCCATA
GTCTATGATGAATCTTCTTCAGGAGGTTCTACATACAATGTGCTCGACGGAATTACATCT
TTCTTCAACAATCTGTTCTCAAAATCTCAACCGTTGACGATAGCAGAGTTTCTGCAGAAG
ATAGTGGAGACAGATCTAAGCTATACACTCATAAAAACCAAATTAACAGAGGATTTCTCC
CCTGAGAGCTCATACAAAATTGTTGTTTCAGCTGAAGGAAGTGCTGGTGCTGACGCCTAT
AAAGTGGGGAAGTCTCAGATAGCTAAGCTCGTTGTGGATGTTTTCTCCAACACAGCGGTG
GCAGAAAATAAGGTAGTGACTGCTCCTCCTTTTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003839
PEP Infomation

pacid=37451291 transcript=PGSC0003DMT400005493 locus=PGSC0003DMG400002146 ID=PGSC0003DMT400005493.v4.03 annot-version=v4.03
Sequence

MAPTLTSNSFLLSTTPHPRLSFKNPRFTVSAKKSGQNQETTNNSGNPFNFDFGKLPDVTS
LIPASTNTSSGLSFGRQRAKDPGTVFVAGATGQAGIRIAQLLLREGYSVRAGVSDLGAAQ
ELARLAVSYKVISNDESKRLNAVASTFQDAESIAKAIGNASKVVVTIGKGENGPATEVTT
TDAVQVIQAAQLAGVGHVAIVYDESSSGGSTYNVLDGITSFFNNLFSKSQPLTIAEFLQK
IVETDLSYTLIKTKLTEDFSPESSYKIVVSAEGSAGADAYKVGKSQIAKLVVDVFSNTAV
AENKVVTAPPFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400005493
Transcript Infomation

pacid=37451291 locus=PGSC0003DMG400002146 ID=PGSC0003DMT400005493.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAACTCTTACTTCAAATTCATTTCTCCTTTCAACTACACCTCATCCAAGATTA
TCATTCAAAAATCCAAGATTCACTGTTTCTGCTAAAAAATCTGGACAAAATCAAGAAACT
ACAAACAATTCTGGCAACCCCTTCAACTTTGATTTCGGTAAGTTGCCTGATGTGACGTCT
TTGATACCTGCTAGCACGAACACATCTTCTGGATTGTCTTTTGGAAGGCAAAGGGCAAAG
GATCCTGGAACAGTGTTTGTTGCTGGTGCAACTGGGCAAGCTGGTATCCGCATTGCACAG
TTGCTGTTGCGTGAAGGTTATAGTGTCAGAGCTGGAGTTTCTGACCTTGGTGCTGCACAA
GAGCTAGCTCGTCTAGCCGTTAGCTACAAGGTAATCTCTAACGATGAGTCAAAACGCCTG
AATGCAGTTGCATCCACATTTCAAGATGCAGAATCGATTGCAAAGGCAATCGGAAATGCT
AGCAAAGTTGTGGTTACTATTGGTAAGGGAGAAAACGGTCCTGCGACTGAAGTCACCACA
ACAGATGCTGTACAAGTTATACAAGCTGCACAATTAGCTGGTGTTGGGCATGTGGCCATA
GTCTATGATGAATCTTCTTCAGGAGGTTCTACATACAATGTGCTCGACGGAATTACATCT
TTCTTCAACAATCTGTTCTCAAAATCTCAACCGTTGACGATAGCAGAGTTTCTGCAGAAG
ATAGTGGAGACAGATCTAAGCTATACACTCATAAAAACCAAATTAACAGAGGATTTCTCC
CCTGAGAGCTCATACAAAATTGTTGTTTCAGCTGAAGGAAGTGCTGGTGCTGACGCCTAT
AAAGTGGGGAAGTCTCAGATAGCTAAGCTCGTTGTGGATGTTTTCTCCAACACAGCGGTG
GCAGAAAATAAGGTAGTGACTGCTCCTCCTTTTAAGTAA