Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005491
CDS Infomation

pacid=37453555 polypeptide=PGSC0003DMP400003837 locus=PGSC0003DMG400002145 ID=PGSC0003DMT400005491.v4.03 annot-version=v4.03
Sequence

ATGGGGTTTGATTCAAATGTATTTATTAACACTGCTCTTCTTGATTTGTATGGAAAATGT
GGTTATGTTAAAGAAGCAGAGCAACTGTTTGATGAAATGCCTGAAAGAAATGTGGTGTCA
TGGAATGCTTTGATTTCTGGTTATTTGGACACCCATTACCCTGAAAATGCGATTGTGTTG
TTTCTTGAAATGTTGAGAGAGGGTATTAGACCGACCCCGTCTAGTGTTTCGGCTGTGTTG
GTTGGTTGTGCTCAGTTAGAAGCATGTGAAATTGGGGCTCAGTTTCATGGTTTGAGCTGG
AAAGTTGGTTTTGCTTTGAATCTTGTTGTAGGGACTGTTTTGATTGATATGTATTTGAAG
TGTTTTGATCTTGAGACTTCGAGGAGAGTTTTCGATCAAATGACTGAAAGGAATGTTATT
ACTTGGACATCAATGATTACTGGTTATGCGCAAAACCGGTGTCCTTTTCAAGCTGTGATT
TTGTTCAAGGAAATGTTGAGGTTGGGAATTAGAGCTAATTGTGTTACGTATACGAGTTTG
TTAAGCTCGTTTTCTTGTTCAGATTACTTGGTTCATTGTGAGCAGGTACACTGTCATGTA
ATACATCAATGTTGTAAGACTAACCATTACTTGGTGGTATCGTTGCTGTCTGCTTACTCA
GGTTGTAGCTGTAGCTTAGAGGATTTCCGTAAGTTGTGTTCTAACGTTGTGAAATGGGAT
GAGATCTCCTGGAATGCAGTTATTTCCGGTTTCTCTAATTTAGGAGTCGGTGGAGAAGCG
TTCTCCTGCTTCTCAAGAATGAGGTGGGCTGGTTTTACTGTTGATCATTACACTTTTGCG
AGCATTTTGAAAGGAATAGGGAGCATTTCAGGCCTGGAGGAAGGAATGCTGATCCATTGT
CTAGCTCTGAAAACAGGATATGCTTCTGAAGTTATCATACAAAATGGGCTTCTTTCCATG
TATACAAAATGTGGTAGACTTGAAGATGCCGAGAAAATATTCTCATCAATGGAGGAACGA
GACCTCATATCGTGGAACTCACTTCTTACAGGCTGTGCACATCATGGTTATGGTAGGGAT
GTGATTGTAATGTTTGAAGAAATGAGGAGATGTGGTATTAAACCAGATCTAACCACATTC
CTTATTGTTCTTTCGGCATGTAGACATGCTGGCCTGCTCGACGAAGGGCTTAAATATTTT
GATCTGATGAAGAATGACAATTCTCTACCACCACCAAAGCTAGAGCATTATGCTTGCATA
GTCGACCTGTATGCCCGTGCTGGTCATCTACGTGAAGCAGAGGACTTCGTCAACAATATG
CCAATAGAACCAGGACCTTCGGTTTATAAAAGTCTACTGAATGCTTGCCAACTACACGGT
AATAAGGGACTTGCTGTGATTTCTGCCAAGAAGCTTGTTGAACTTTGTCCCAACGATCCT
GCAACGTACGTATTGCTAGCAAATGTGTTAGCATTGGAAGGGAATTGGAAGGACGCGGAG
GGACAGCGCAAGCTTATGTTGGATAGAGGATTGAGTAAGAAACCTGGTTATAGCTGGCTA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400003837
PEP Infomation

pacid=37453555 transcript=PGSC0003DMT400005491 locus=PGSC0003DMG400002145 ID=PGSC0003DMT400005491.v4.03 annot-version=v4.03
Sequence

MGFDSNVFINTALLDLYGKCGYVKEAEQLFDEMPERNVVSWNALISGYLDTHYPENAIVL
FLEMLREGIRPTPSSVSAVLVGCAQLEACEIGAQFHGLSWKVGFALNLVVGTVLIDMYLK
CFDLETSRRVFDQMTERNVITWTSMITGYAQNRCPFQAVILFKEMLRLGIRANCVTYTSL
LSSFSCSDYLVHCEQVHCHVIHQCCKTNHYLVVSLLSAYSGCSCSLEDFRKLCSNVVKWD
EISWNAVISGFSNLGVGGEAFSCFSRMRWAGFTVDHYTFASILKGIGSISGLEEGMLIHC
LALKTGYASEVIIQNGLLSMYTKCGRLEDAEKIFSSMEERDLISWNSLLTGCAHHGYGRD
VIVMFEEMRRCGIKPDLTTFLIVLSACRHAGLLDEGLKYFDLMKNDNSLPPPKLEHYACI
VDLYARAGHLREAEDFVNNMPIEPGPSVYKSLLNACQLHGNKGLAVISAKKLVELCPNDP
ATYVLLANVLALEGNWKDAEGQRKLMLDRGLSKKPGYSWL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005491
Transcript Infomation

pacid=37453555 locus=PGSC0003DMG400002145 ID=PGSC0003DMT400005491.v4.03 annot-version=v4.03
Sequence

ATGGGGTTTGATTCAAATGTATTTATTAACACTGCTCTTCTTGATTTGTATGGAAAATGT
GGTTATGTTAAAGAAGCAGAGCAACTGTTTGATGAAATGCCTGAAAGAAATGTGGTGTCA
TGGAATGCTTTGATTTCTGGTTATTTGGACACCCATTACCCTGAAAATGCGATTGTGTTG
TTTCTTGAAATGTTGAGAGAGGGTATTAGACCGACCCCGTCTAGTGTTTCGGCTGTGTTG
GTTGGTTGTGCTCAGTTAGAAGCATGTGAAATTGGGGCTCAGTTTCATGGTTTGAGCTGG
AAAGTTGGTTTTGCTTTGAATCTTGTTGTAGGGACTGTTTTGATTGATATGTATTTGAAG
TGTTTTGATCTTGAGACTTCGAGGAGAGTTTTCGATCAAATGACTGAAAGGAATGTTATT
ACTTGGACATCAATGATTACTGGTTATGCGCAAAACCGGTGTCCTTTTCAAGCTGTGATT
TTGTTCAAGGAAATGTTGAGGTTGGGAATTAGAGCTAATTGTGTTACGTATACGAGTTTG
TTAAGCTCGTTTTCTTGTTCAGATTACTTGGTTCATTGTGAGCAGGTACACTGTCATGTA
ATACATCAATGTTGTAAGACTAACCATTACTTGGTGGTATCGTTGCTGTCTGCTTACTCA
GGTTGTAGCTGTAGCTTAGAGGATTTCCGTAAGTTGTGTTCTAACGTTGTGAAATGGGAT
GAGATCTCCTGGAATGCAGTTATTTCCGGTTTCTCTAATTTAGGAGTCGGTGGAGAAGCG
TTCTCCTGCTTCTCAAGAATGAGGTGGGCTGGTTTTACTGTTGATCATTACACTTTTGCG
AGCATTTTGAAAGGAATAGGGAGCATTTCAGGCCTGGAGGAAGGAATGCTGATCCATTGT
CTAGCTCTGAAAACAGGATATGCTTCTGAAGTTATCATACAAAATGGGCTTCTTTCCATG
TATACAAAATGTGGTAGACTTGAAGATGCCGAGAAAATATTCTCATCAATGGAGGAACGA
GACCTCATATCGTGGAACTCACTTCTTACAGGCTGTGCACATCATGGTTATGGTAGGGAT
GTGATTGTAATGTTTGAAGAAATGAGGAGATGTGGTATTAAACCAGATCTAACCACATTC
CTTATTGTTCTTTCGGCATGTAGACATGCTGGCCTGCTCGACGAAGGGCTTAAATATTTT
GATCTGATGAAGAATGACAATTCTCTACCACCACCAAAGCTAGAGCATTATGCTTGCATA
GTCGACCTGTATGCCCGTGCTGGTCATCTACGTGAAGCAGAGGACTTCGTCAACAATATG
CCAATAGAACCAGGACCTTCGGTTTATAAAAGTCTACTGAATGCTTGCCAACTACACGGT
AATAAGGGACTTGCTGTGATTTCTGCCAAGAAGCTTGTTGAACTTTGTCCCAACGATCCT
GCAACGTACGTATTGCTAGCAAATGTGTTAGCATTGGAAGGGAATTGGAAGGACGCGGAG
GGACAGCGCAAGCTTATGTTGGATAGAGGATTGAGTAAGAAACCTGGTTATAGCTGGCTA
TAA